RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 PPP1R12BO60237 982 aaPredicted RBP9.4□□□□□ -0.9
CHD9-206ENST00000562791 HIRAP54198 1017 aaPredicted RBP9.4□□□□□ -0.9
CHD9-206ENST00000562791 GALNT6Q8NCL4 622 aa9.4□□□□□ -0.9
CHD9-206ENST00000562791 RHPN1Q8TCX5 695 aa9.4□□□□□ -0.9
CHD9-206ENST00000562791 SCARF2Q96GP6 870 aaPredicted RBP9.4□□□□□ -0.9
CHD9-206ENST00000562791 PHACTR1Q9C0D0 580 aa9.4□□□□□ -0.9
CHD9-206ENST00000562791 GDF2Q9UK05 429 aaPredicted RBP9.4□□□□□ -0.9
CHD9-206ENST00000562791 HCN4Q9Y3Q4 1203 aa9.4□□□□□ -0.9
CHD9-206ENST00000562791 RBM19Q9Y4C8 960 aaKnown RBP9.4□□□□□ -0.9
CHD9-206ENST00000562791 SLCO4C1Q6ZQN7 724 aa9.39□□□□□ -0.91
CHD9-206ENST00000562791 GOLGA6L1Q8N7Z2 621 aa9.39□□□□□ -0.91
CHD9-206ENST00000562791 GAS2L2Q8NHY3 880 aa9.39□□□□□ -0.91
CHD9-206ENST00000562791 HSH2DQ96JZ2 352 aa9.39□□□□□ -0.91
CHD9-206ENST00000562791 ARXQ96QS3 562 aa9.39□□□□□ -0.91
CHD9-206ENST00000562791 VRTNQ9H8Y1 702 aa9.39□□□□□ -0.91
CHD9-206ENST00000562791 GDF11O95390 407 aa9.38□□□□□ -0.91
CHD9-206ENST00000562791 GRIN2CQ14957 1233 aa9.38□□□□□ -0.91
CHD9-206ENST00000562791 FAM182BQ5T319 152 aa9.38□□□□□ -0.91
CHD9-206ENST00000562791 ANKMY2Q8IV38 441 aa9.38□□□□□ -0.91
CHD9-206ENST00000562791 EDARADDQ8WWZ3 215 aa9.38□□□□□ -0.91
CHD9-206ENST00000562791 SCG3Q8WXD2 468 aaKnown RBP9.38□□□□□ -0.91
CHD9-206ENST00000562791 KLF15Q9UIH9 416 aa9.38□□□□□ -0.91
CHD9-206ENST00000562791 ATAD2Q6PL18 1390 aa9.37□□□□□ -0.91
CHD9-206ENST00000562791 NEURL1BA8MQ27 555 aa9.37□□□□□ -0.91
CHD9-206ENST00000562791 ARAFP10398 606 aa9.37□□□□□ -0.91
CHD9-206ENST00000562791 SNRPNP63162 240 aaKnown RBP9.37□□□□□ -0.91
CHD9-206ENST00000562791 CDCA8Q53HL2 280 aa9.37□□□□□ -0.91
CHD9-206ENST00000562791 TMEM151AQ8N4L1 468 aa9.37□□□□□ -0.91
CHD9-206ENST00000562791 C2orf49Q9BVC5 232 aaPredicted RBP9.37□□□□□ -0.91
CHD9-206ENST00000562791 DNMT3AQ9Y6K1 912 aaPredicted RBP9.37□□□□□ -0.91
CHD9-206ENST00000562791 KCTD17Q8N5Z5 321 aa9.36□□□□□ -0.91
CHD9-206ENST00000562791 CHMP7Q8WUX9 453 aaPredicted RBP9.36□□□□□ -0.91
CHD9-206ENST00000562791 CHMP3Q9Y3E7 222 aa9.36□□□□□ -0.91
CHD9-206ENST00000562791 GPC6Q9Y625 555 aaPredicted RBP9.36□□□□□ -0.91
CHD9-206ENST00000562791 HOXB4P17483 251 aaPredicted RBP9.35□□□□□ -0.91
CHD9-206ENST00000562791 RFX1P22670 979 aa9.35□□□□□ -0.91
CHD9-206ENST00000562791 C1orf53Q5VUE5 145 aa9.35□□□□□ -0.91
CHD9-206ENST00000562791 FCHSD1Q86WN1 690 aa9.35□□□□□ -0.91
CHD9-206ENST00000562791 ALDH16A1Q8IZ83 802 aa9.35□□□□□ -0.91
CHD9-206ENST00000562791 ZNF280CQ8ND82 737 aa9.35□□□□□ -0.91
CHD9-206ENST00000562791 HINFPQ9BQA5 517 aa9.35□□□□□ -0.91
CHD9-206ENST00000562791 MARK1Q9P0L2 795 aa9.35□□□□□ -0.91
CHD9-206ENST00000562791 EPXP11678 715 aa9.34□□□□□ -0.91
CHD9-206ENST00000562791 PCBP4P57723 403 aaKnown RBP9.34□□□□□ -0.91
CHD9-206ENST00000562791 SFSWAPQ12872 951 aaKnown RBP9.34□□□□□ -0.91
CHD9-206ENST00000562791 KANK3Q6NY19 840 aa9.34□□□□□ -0.91
CHD9-206ENST00000562791 STAG2Q8N3U4 1231 aa9.34□□□□□ -0.91
CHD9-206ENST00000562791 ZNF468Q5VIY5 522 aaPredicted RBP9.33□□□□□ -0.92
CHD9-206ENST00000562791 NGLY1Q96IV0 654 aa9.33□□□□□ -0.92
CHD9-206ENST00000562791 SUSD3Q96L08 255 aa9.33□□□□□ -0.92
CHD9-206ENST00000562791 ADH6P28332 368 aa9.32□□□□□ -0.92
CHD9-206ENST00000562791 TYRO3Q06418 890 aa9.32□□□□□ -0.92
CHD9-206ENST00000562791 LAMC2Q13753 1193 aa9.32□□□□□ -0.92
CHD9-206ENST00000562791 PODNQ7Z5L7 613 aa9.32□□□□□ -0.92
CHD9-206ENST00000562791 NEUROD4Q9HD90 331 aa9.32□□□□□ -0.92
CHD9-206ENST00000562791 PHF20L1A8MW92 1017 aa9.31□□□□□ -0.92
CHD9-206ENST00000562791 IGFBP4P22692 258 aa9.31□□□□□ -0.92
CHD9-206ENST00000562791 BEND7Q8N7W2 519 aaPredicted RBP9.31□□□□□ -0.92
CHD9-206ENST00000562791 SLC30A3Q99726 388 aa9.31□□□□□ -0.92
CHD9-206ENST00000562791 ZMYND15Q9H091 742 aa9.31□□□□□ -0.92
CHD9-206ENST00000562791 RRAGCQ9HB90 399 aa9.31□□□□□ -0.92
CHD9-206ENST00000562791 AVENQ9NQS1 362 aaPredicted RBP9.31□□□□□ -0.92
CHD9-206ENST00000562791 AMPD1P23109 780 aa9.3□□□□□ -0.92
CHD9-206ENST00000562791 BTBD6Q96KE9 485 aa9.3□□□□□ -0.92
CHD9-206ENST00000562791 BRD7Q9NPI1 651 aa9.3□□□□□ -0.92
CHD9-206ENST00000562791 PRR12Q9ULL5 1215 aa9.3□□□□□ -0.92
CHD9-206ENST00000562791 CEP63Q96MT8 703 aa9.29□□□□□ -0.92
CHD9-206ENST00000562791 ZMIZ1Q9ULJ6 1067 aa9.29□□□□□ -0.92
CHD9-206ENST00000562791 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.28□□□□□ -0.92
CHD9-206ENST00000562791 WEE1P30291 646 aa9.28□□□□□ -0.92
CHD9-206ENST00000562791 DGKGP49619 791 aa9.28□□□□□ -0.92
CHD9-206ENST00000562791 CHSY3Q70JA7 882 aa9.28□□□□□ -0.92
CHD9-206ENST00000562791 RAB44Q7Z6P3 723 aaPredicted RBP9.28□□□□□ -0.92
CHD9-206ENST00000562791 SYT9Q86SS6 491 aa9.28□□□□□ -0.92
CHD9-206ENST00000562791 DCAF5Q96JK2 942 aa9.28□□□□□ -0.92
CHD9-206ENST00000562791 MKL2Q9ULH7 1088 aa9.28□□□□□ -0.92
CHD9-206ENST00000562791 NOVA2Q9UNW9 492 aaKnown RBP9.28□□□□□ -0.92
CHD9-206ENST00000562791 ITGB2P05107 769 aa9.27□□□□□ -0.93
CHD9-206ENST00000562791 SRPK2P78362 688 aaKnown RBP9.27□□□□□ -0.93
CHD9-206ENST00000562791 RTN1Q16799 776 aa9.27□□□□□ -0.93
CHD9-206ENST00000562791 LINC00114Q6XXX2 140 aa9.27□□□□□ -0.93
CHD9-206ENST00000562791 FAM200AQ8TCP9 573 aa9.27□□□□□ -0.93
CHD9-206ENST00000562791 MDFIQ99750 246 aa9.27□□□□□ -0.93
CHD9-206ENST00000562791 ANKIB1Q9P2G1 1089 aa9.27□□□□□ -0.93
CHD9-206ENST00000562791 BCS1LQ9Y276 419 aa9.27□□□□□ -0.93
CHD9-206ENST00000562791 GTF3C3Q9Y5Q9 886 aa9.27□□□□□ -0.93
CHD9-206ENST00000562791 COL8A1P27658 744 aa9.26□□□□□ -0.93
CHD9-206ENST00000562791 SPEM2Q0P670 501 aa9.26□□□□□ -0.93
CHD9-206ENST00000562791 BTLAQ7Z6A9 289 aa9.26□□□□□ -0.93
CHD9-206ENST00000562791 STK32AQ8WU08 396 aa9.26□□□□□ -0.93
CHD9-206ENST00000562791 SUV39H2Q9H5I1 410 aa9.26□□□□□ -0.93
CHD9-206ENST00000562791 QTRT2Q9H974 415 aaKnown RBP9.26□□□□□ -0.93
CHD9-206ENST00000562791 ARID3CA6NKF2 412 aa9.25□□□□□ -0.93
CHD9-206ENST00000562791 KCNQ4P56696 695 aa9.25□□□□□ -0.93
CHD9-206ENST00000562791 PLA2G4EQ3MJ16 856 aa9.24□□□□□ -0.93
CHD9-206ENST00000562791 GPAT2Q6NUI2 795 aa9.24□□□□□ -0.93
CHD9-206ENST00000562791 KLK14Q9P0G3 267 aa9.24□□□□□ -0.93
CHD9-206ENST00000562791 KCNH4Q9UQ05 1017 aa9.24□□□□□ -0.93
CHD9-206ENST00000562791 TGFBR3LH3BV60 316 aa9.23□□□□□ -0.93
CHD9-206ENST00000562791 FOXO3O43524 673 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms