RNA–Protein interactions for RNA: ENST00000562373.1

NR4A1-219, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 838 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-219ENST00000562373 PDIA6Q15084 440 aa27.51■■□□□ 1.99
NR4A1-219ENST00000562373 ARHGAP27Q6ZUM4 889 aa27.51■■□□□ 1.99
NR4A1-219ENST00000562373 C2CD5Q86YS7 1000 aa27.51■■□□□ 1.99
NR4A1-219ENST00000562373 NIP7Q9Y221 180 aaKnown RBP eCLIP27.51■■□□□ 1.99
NR4A1-219ENST00000562373 ZNF652Q9Y2D9 606 aa27.51■■□□□ 1.99
NR4A1-219ENST00000562373 NPHP1O15259 732 aa27.5■■□□□ 1.99
NR4A1-219ENST00000562373 DALRD3Q5D0E6 543 aaKnown RBP27.5■■□□□ 1.99
NR4A1-219ENST00000562373 CFAP44Q96MT7 982 aa27.5■■□□□ 1.99
NR4A1-219ENST00000562373 BRCA1P38398 1863 aaKnown RBP27.5■■□□□ 1.99
NR4A1-219ENST00000562373 ZBTB3Q9H5J0 574 aa27.49■■□□□ 1.99
NR4A1-219ENST00000562373 MBIPQ9NS73 344 aa27.49■■□□□ 1.99
NR4A1-219ENST00000562373 CNBD1Q8NA66 436 aa27.48■■□□□ 1.99
NR4A1-219ENST00000562373 MAP3K15Q6ZN16 1313 aa27.47■■□□□ 1.99
NR4A1-219ENST00000562373 H0YIN7 160 aa27.47■■□□□ 1.99
NR4A1-219ENST00000562373 ZNF853P0CG23 659 aa27.47■■□□□ 1.99
NR4A1-219ENST00000562373 KIF6Q6ZMV9 814 aa27.47■■□□□ 1.99
NR4A1-219ENST00000562373 LRP10Q7Z4F1 713 aa27.47■■□□□ 1.99
NR4A1-219ENST00000562373 NBPF5PQ86XG9 351 aaPredicted RBP27.47■■□□□ 1.99
NR4A1-219ENST00000562373 BRIP1Q9BX63 1249 aa27.46■■□□□ 1.99
NR4A1-219ENST00000562373 ANKRD31Q8N7Z5 1873 aa27.46■■□□□ 1.99
NR4A1-219ENST00000562373 ERBB4Q15303 1308 aa27.45■■□□□ 1.99
NR4A1-219ENST00000562373 ERVV-1B6SEH8 477 aa27.44■■□□□ 1.98
NR4A1-219ENST00000562373 GPTP24298 496 aa27.44■■□□□ 1.98
NR4A1-219ENST00000562373 AIMP1Q12904 312 aaKnown RBP27.44■■□□□ 1.98
NR4A1-219ENST00000562373 ZNF622Q969S3 477 aaKnown RBP eCLIP27.44■■□□□ 1.98
NR4A1-219ENST00000562373 SALL2Q9Y467 1007 aaPredicted RBP27.44■■□□□ 1.98
NR4A1-219ENST00000562373 ELL2O00472 640 aaPredicted RBP27.43■■□□□ 1.98
NR4A1-219ENST00000562373 PDE6BP35913 854 aa27.43■■□□□ 1.98
NR4A1-219ENST00000562373 ST5P78524 1137 aa27.43■■□□□ 1.98
NR4A1-219ENST00000562373 DUSP27Q5VZP5 1158 aa27.43■■□□□ 1.98
NR4A1-219ENST00000562373 IFT57Q9NWB7 429 aa27.43■■□□□ 1.98
NR4A1-219ENST00000562373 GNAI1P63096 354 aa27.42■■□□□ 1.98
NR4A1-219ENST00000562373 COPS6Q7L5N1 327 aa27.42■■□□□ 1.98
NR4A1-219ENST00000562373 FAM9BQ8IZU0 186 aa27.42■■□□□ 1.98
NR4A1-219ENST00000562373 CHPF2Q9P2E5 772 aa27.42■■□□□ 1.98
NR4A1-219ENST00000562373 NUP98P52948 1817 aa27.41■■□□□ 1.98
NR4A1-219ENST00000562373 TPTE2Q6XPS3 522 aa27.41■■□□□ 1.98
NR4A1-219ENST00000562373 TTLL6Q8N841 843 aa27.41■■□□□ 1.98
NR4A1-219ENST00000562373 XAGE3Q8WTP9 111 aa27.41■■□□□ 1.98
NR4A1-219ENST00000562373 ZNF219Q9P2Y4 722 aaPredicted RBP27.41■■□□□ 1.98
NR4A1-219ENST00000562373 RGL2O15211 777 aa27.4■■□□□ 1.98
NR4A1-219ENST00000562373 CALD1Q05682 793 aaKnown RBP27.4■■□□□ 1.98
NR4A1-219ENST00000562373 HDGFL1Q5TGJ6 251 aa27.4■■□□□ 1.98
NR4A1-219ENST00000562373 DDX21Q9NR30 783 aaKnown RBP eCLIP27.4■■□□□ 1.98
NR4A1-219ENST00000562373 ARFGEF1Q9Y6D6 1849 aa27.39■■□□□ 1.98
NR4A1-219ENST00000562373 NUTM1Q86Y26 1132 aa27.39■■□□□ 1.98
NR4A1-219ENST00000562373 ZNF526Q8TF50 670 aaPredicted RBP27.39■■□□□ 1.98
NR4A1-219ENST00000562373 GIGYF2Q6Y7W6 1299 aaKnown RBP27.38■■□□□ 1.97
NR4A1-219ENST00000562373 WWC1Q8IX03 1113 aa27.38■■□□□ 1.97
NR4A1-219ENST00000562373 C8orf58Q8NAV2 365 aa27.38■■□□□ 1.97
NR4A1-219ENST00000562373 ATP10DQ9P241 1426 aa27.38■■□□□ 1.97
NR4A1-219ENST00000562373 UBN2Q6ZU65 1347 aa27.38■■□□□ 1.97
NR4A1-219ENST00000562373 GTF2E1P29083 439 aaPredicted RBP27.37■■□□□ 1.97
NR4A1-219ENST00000562373 SUSD4Q5VX71 490 aa27.37■■□□□ 1.97
NR4A1-219ENST00000562373 ZNF34Q8IZ26 560 aa27.37■■□□□ 1.97
NR4A1-219ENST00000562373 TSR2Q969E8 191 aaKnown RBP27.37■■□□□ 1.97
NR4A1-219ENST00000562373 COL11A2P13942 1736 aaPredicted RBP27.36■■□□□ 1.97
NR4A1-219ENST00000562373 DLEC1Q9Y238 1755 aa27.36■■□□□ 1.97
NR4A1-219ENST00000562373 HOXB7P09629 217 aa27.35■■□□□ 1.97
NR4A1-219ENST00000562373 SRGNP10124 158 aa27.35■■□□□ 1.97
NR4A1-219ENST00000562373 RASSF7Q02833 373 aa27.35■■□□□ 1.97
NR4A1-219ENST00000562373 ERFEQ4G0M1 354 aa27.35■■□□□ 1.97
NR4A1-219ENST00000562373 ZNF428Q96B54 188 aa27.35■■□□□ 1.97
NR4A1-219ENST00000562373 CCDC27Q2M243 656 aa27.34■■□□□ 1.97
NR4A1-219ENST00000562373 C9orf131Q5VYM1 1079 aa27.34■■□□□ 1.97
NR4A1-219ENST00000562373 TSPYL6Q8N831 410 aa27.34■■□□□ 1.97
NR4A1-219ENST00000562373 PDZRN3Q9UPQ7 1066 aa27.34■■□□□ 1.97
NR4A1-219ENST00000562373 ADCY9O60503 1353 aa27.34■■□□□ 1.97
NR4A1-219ENST00000562373 C21orf2O43822 256 aa27.33■■□□□ 1.97
NR4A1-219ENST00000562373 MASTLQ96GX5 879 aa27.32■■□□□ 1.96
NR4A1-219ENST00000562373 DBF4Q9UBU7 674 aaPredicted RBP27.32■■□□□ 1.96
NR4A1-219ENST00000562373 ABCC12Q96J65 1359 aa27.32■■□□□ 1.96
NR4A1-219ENST00000562373 STYK1Q6J9G0 422 aa27.31■■□□□ 1.96
NR4A1-219ENST00000562373 NYXQ9GZU5 481 aa27.31■■□□□ 1.96
NR4A1-219ENST00000562373 PRELPP51888 382 aa27.3■■□□□ 1.96
NR4A1-219ENST00000562373 KLRG2A4D1S0 409 aaPredicted RBP27.29■■□□□ 1.96
NR4A1-219ENST00000562373 NTSR2O95665 410 aa27.29■■□□□ 1.96
NR4A1-219ENST00000562373 CNKSR1Q969H4 720 aa27.29■■□□□ 1.96
NR4A1-219ENST00000562373 PHAXQ9H814 394 aaKnown RBP27.29■■□□□ 1.96
NR4A1-219ENST00000562373 RNF181Q9P0P0 153 aa27.29■■□□□ 1.96
NR4A1-219ENST00000562373 SLX4Q8IY92 1834 aa27.28■■□□□ 1.96
NR4A1-219ENST00000562373 TCERG1O14776 1098 aaKnown RBP27.28■■□□□ 1.96
NR4A1-219ENST00000562373 PRPF40BQ6NWY9 871 aaKnown RBP27.28■■□□□ 1.96
NR4A1-219ENST00000562373 GPBP1L1Q9HC44 474 aaPredicted RBP27.28■■□□□ 1.96
NR4A1-219ENST00000562373 CACNA1SQ13698 1873 aa27.27■■□□□ 1.96
NR4A1-219ENST00000562373 NPR1P16066 1061 aa27.27■■□□□ 1.96
NR4A1-219ENST00000562373 TCIRG1Q13488 830 aa27.27■■□□□ 1.96
NR4A1-219ENST00000562373 ANKRD13DQ6ZTN6 518 aa27.27■■□□□ 1.96
NR4A1-219ENST00000562373 HYPKQ9NX55 129 aa27.27■■□□□ 1.96
NR4A1-219ENST00000562373 NFKBIEO00221 500 aa27.26■■□□□ 1.95
NR4A1-219ENST00000562373 PPP1R42Q7Z4L9 355 aa27.26■■□□□ 1.95
NR4A1-219ENST00000562373 SYNE4Q8N205 404 aa27.26■■□□□ 1.95
NR4A1-219ENST00000562373 UTP14AQ9BVJ6 771 aaKnown RBP27.26■■□□□ 1.95
NR4A1-219ENST00000562373 TNRC6CQ9HCJ0 1690 aaKnown RBP27.25■■□□□ 1.95
NR4A1-219ENST00000562373 PARP10Q53GL7 1025 aa27.25■■□□□ 1.95
NR4A1-219ENST00000562373 C3orf67Q6ZVT6 689 aa27.25■■□□□ 1.95
NR4A1-219ENST00000562373 PLBD2Q8NHP8 589 aa27.25■■□□□ 1.95
NR4A1-219ENST00000562373 SBF1O95248 1867 aa27.25■■□□□ 1.95
NR4A1-219ENST00000562373 NCBP3Q53F19 620 aaKnown RBP27.24■■□□□ 1.95
NR4A1-219ENST00000562373 HSP90AB3PQ58FF7 597 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms