RNA–Protein interactions for RNA: ENST00000562131.1

NIP7-203, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 4

Gene NIP7, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-203ENST00000562131 NRXN2Q9P2S2 1712 aa12.55□□□□□ -0.4
NIP7-203ENST00000562131 FAM177BA6PVY3 158 aa12.55□□□□□ -0.4
NIP7-203ENST00000562131 KIF3CO14782 793 aa12.55□□□□□ -0.4
NIP7-203ENST00000562131 CENPBP07199 599 aaPredicted RBP12.55□□□□□ -0.4
NIP7-203ENST00000562131 TMPOP42166 694 aaKnown RBP12.55□□□□□ -0.4
NIP7-203ENST00000562131 ST5P78524 1137 aa12.55□□□□□ -0.4
NIP7-203ENST00000562131 RASSF7Q02833 373 aa12.55□□□□□ -0.4
NIP7-203ENST00000562131 NBPF5PQ86XG9 351 aaPredicted RBP12.55□□□□□ -0.4
NIP7-203ENST00000562131 ZNF219Q9P2Y4 722 aaPredicted RBP12.55□□□□□ -0.4
NIP7-203ENST00000562131 ADAMTS8Q9UP79 889 aa12.55□□□□□ -0.4
NIP7-203ENST00000562131 DLG5Q8TDM6 1919 aa12.54□□□□□ -0.4
NIP7-203ENST00000562131 ARFGEF1Q9Y6D6 1849 aa12.54□□□□□ -0.4
NIP7-203ENST00000562131 MYL6BP14649 208 aa12.54□□□□□ -0.4
NIP7-203ENST00000562131 HLFQ16534 295 aa12.54□□□□□ -0.4
NIP7-203ENST00000562131 TSPYL4Q9UJ04 414 aa12.54□□□□□ -0.4
NIP7-203ENST00000562131 PDZRN3Q9UPQ7 1066 aa12.54□□□□□ -0.4
NIP7-203ENST00000562131 NIP7Q9Y221 180 aaKnown RBP eCLIP12.54□□□□□ -0.4
NIP7-203ENST00000562131 SCN7AQ01118 1682 aa12.54□□□□□ -0.4
NIP7-203ENST00000562131 C21orf2O43822 256 aa12.53□□□□□ -0.4
NIP7-203ENST00000562131 NMRK2Q9NPI5 230 aa12.53□□□□□ -0.4
NIP7-203ENST00000562131 CEP350Q5VT06 3117 aa12.52□□□□□ -0.4
NIP7-203ENST00000562131 EIF2S2P20042 333 aaKnown RBP12.52□□□□□ -0.41
NIP7-203ENST00000562131 LMOD3Q0VAK6 560 aa12.52□□□□□ -0.41
NIP7-203ENST00000562131 TPTE2Q6XPS3 522 aa12.52□□□□□ -0.41
NIP7-203ENST00000562131 TTLL7Q6ZT98 887 aa12.52□□□□□ -0.41
NIP7-203ENST00000562131 RUNDC1Q96C34 613 aa12.52□□□□□ -0.41
NIP7-203ENST00000562131 SRGNP10124 158 aa12.51□□□□□ -0.41
NIP7-203ENST00000562131 LMNB1P20700 586 aa12.51□□□□□ -0.41
NIP7-203ENST00000562131 GTF2E1P29083 439 aaPredicted RBP12.51□□□□□ -0.41
NIP7-203ENST00000562131 PRELPP51888 382 aa12.51□□□□□ -0.41
NIP7-203ENST00000562131 KIF6Q6ZMV9 814 aa12.51□□□□□ -0.41
NIP7-203ENST00000562131 CNKSR1Q969H4 720 aa12.51□□□□□ -0.41
NIP7-203ENST00000562131 LAS1LQ9Y4W2 734 aaKnown RBP12.51□□□□□ -0.41
NIP7-203ENST00000562131 ZBED9Q6R2W3 1325 aa12.51□□□□□ -0.41
NIP7-203ENST00000562131 RGL2O15211 777 aa12.5□□□□□ -0.41
NIP7-203ENST00000562131 STYK1Q6J9G0 422 aa12.5□□□□□ -0.41
NIP7-203ENST00000562131 MASTLQ96GX5 879 aa12.5□□□□□ -0.41
NIP7-203ENST00000562131 ZBTB3Q9H5J0 574 aa12.5□□□□□ -0.41
NIP7-203ENST00000562131 RRAGCQ9HB90 399 aa12.5□□□□□ -0.41
NIP7-203ENST00000562131 KDM2BQ8NHM5 1336 aa12.5□□□□□ -0.41
NIP7-203ENST00000562131 KDM3BQ7LBC6 1761 aa12.5□□□□□ -0.41
NIP7-203ENST00000562131 ANKRD31Q8N7Z5 1873 aa12.49□□□□□ -0.41
NIP7-203ENST00000562131 BCORQ6W2J9 1755 aa12.49□□□□□ -0.41
NIP7-203ENST00000562131 MAP3K15Q6ZN16 1313 aa12.49□□□□□ -0.41
NIP7-203ENST00000562131 ERVV-1B6SEH8 477 aa12.49□□□□□ -0.41
NIP7-203ENST00000562131 NFKBIEO00221 500 aa12.49□□□□□ -0.41
NIP7-203ENST00000562131 TOMM70O94826 608 aa12.49□□□□□ -0.41
NIP7-203ENST00000562131 HSPA6P17066 643 aa12.49□□□□□ -0.41
NIP7-203ENST00000562131 C16orf71Q8IYS4 520 aaPredicted RBP12.49□□□□□ -0.41
NIP7-203ENST00000562131 NECTIN2Q92692 538 aa12.49□□□□□ -0.41
NIP7-203ENST00000562131 BABAM1Q9NWV8 329 aa12.49□□□□□ -0.41
NIP7-203ENST00000562131 TRIM35Q9UPQ4 493 aa12.49□□□□□ -0.41
NIP7-203ENST00000562131 DLEC1Q9Y238 1755 aa12.48□□□□□ -0.41
NIP7-203ENST00000562131 ANXA1P04083 346 aa12.48□□□□□ -0.41
NIP7-203ENST00000562131 GPTP24298 496 aa12.48□□□□□ -0.41
NIP7-203ENST00000562131 PRPF40BQ6NWY9 871 aaKnown RBP12.48□□□□□ -0.41
NIP7-203ENST00000562131 NUTM1Q86Y26 1132 aa12.48□□□□□ -0.41
NIP7-203ENST00000562131 NPR1P16066 1061 aa12.47□□□□□ -0.41
NIP7-203ENST00000562131 NYXQ9GZU5 481 aa12.47□□□□□ -0.41
NIP7-203ENST00000562131 LAMB4A4D0S4 1761 aa12.47□□□□□ -0.41
NIP7-203ENST00000562131 SBF1O95248 1867 aa12.46□□□□□ -0.41
NIP7-203ENST00000562131 COL11A2P13942 1736 aaPredicted RBP12.46□□□□□ -0.41
NIP7-203ENST00000562131 ERBB4Q15303 1308 aa12.46□□□□□ -0.41
NIP7-203ENST00000562131 CHL1O00533 1208 aa12.46□□□□□ -0.41
NIP7-203ENST00000562131 PDIA6Q15084 440 aa12.46□□□□□ -0.41
NIP7-203ENST00000562131 KRT24Q2M2I5 525 aa12.46□□□□□ -0.41
NIP7-203ENST00000562131 PROSER3Q2NL68 480 aa12.46□□□□□ -0.41
NIP7-203ENST00000562131 ERFEQ4G0M1 354 aa12.46□□□□□ -0.41
NIP7-203ENST00000562131 TAOK3Q9H2K8 898 aa12.46□□□□□ -0.41
NIP7-203ENST00000562131 ZC3H4Q9UPT8 1303 aaKnown RBP12.45□□□□□ -0.42
NIP7-203ENST00000562131 KLRG2A4D1S0 409 aaPredicted RBP12.45□□□□□ -0.42
NIP7-203ENST00000562131 GLTPD2A6NH11 291 aa12.45□□□□□ -0.42
NIP7-203ENST00000562131 APAF1O14727 1248 aa12.45□□□□□ -0.42
NIP7-203ENST00000562131 AIMP1Q12904 312 aaKnown RBP12.45□□□□□ -0.42
NIP7-203ENST00000562131 SOGA3Q5TF21 947 aa12.45□□□□□ -0.42
NIP7-203ENST00000562131 SUSD4Q5VX71 490 aa12.45□□□□□ -0.42
NIP7-203ENST00000562131 GIGYF2Q6Y7W6 1299 aaKnown RBP12.45□□□□□ -0.42
NIP7-203ENST00000562131 ZNF34Q8IZ26 560 aa12.45□□□□□ -0.42
NIP7-203ENST00000562131 SALL2Q9Y467 1007 aaPredicted RBP12.45□□□□□ -0.42
NIP7-203ENST00000562131 SLX4Q8IY92 1834 aa12.44□□□□□ -0.42
NIP7-203ENST00000562131 UBN2Q6ZU65 1347 aa12.44□□□□□ -0.42
NIP7-203ENST00000562131 ALDH1B1P30837 517 aa12.44□□□□□ -0.42
NIP7-203ENST00000562131 DPY19L2Q6NUT2 758 aa12.44□□□□□ -0.42
NIP7-203ENST00000562131 OLFM4Q6UX06 510 aa12.44□□□□□ -0.42
NIP7-203ENST00000562131 COPS6Q7L5N1 327 aa12.44□□□□□ -0.42
NIP7-203ENST00000562131 LRP10Q7Z4F1 713 aa12.44□□□□□ -0.42
NIP7-203ENST00000562131 RBM46Q8TBY0 533 aaKnown RBP12.44□□□□□ -0.42
NIP7-203ENST00000562131 C7orf43Q8WVR3 580 aa12.44□□□□□ -0.42
NIP7-203ENST00000562131 VEGFAP15692 232 aaPredicted RBP12.43□□□□□ -0.42
NIP7-203ENST00000562131 CCDC93Q567U6 631 aa12.43□□□□□ -0.42
NIP7-203ENST00000562131 PPP1R42Q7Z4L9 355 aa12.43□□□□□ -0.42
NIP7-203ENST00000562131 XAGE3Q8WTP9 111 aa12.43□□□□□ -0.42
NIP7-203ENST00000562131 ABCC12Q96J65 1359 aa12.43□□□□□ -0.42
NIP7-203ENST00000562131 LTBP3Q9NS15 1303 aa12.42□□□□□ -0.42
NIP7-203ENST00000562131 PARP10Q53GL7 1025 aa12.42□□□□□ -0.42
NIP7-203ENST00000562131 RPGRQ92834 1020 aaKnown RBP12.42□□□□□ -0.42
NIP7-203ENST00000562131 CFAP44Q96MT7 982 aa12.42□□□□□ -0.42
NIP7-203ENST00000562131 DDX21Q9NR30 783 aaKnown RBP eCLIP12.42□□□□□ -0.42
NIP7-203ENST00000562131 CCDC88AQ3V6T2 1871 aa12.42□□□□□ -0.42
NIP7-203ENST00000562131 NUP98P52948 1817 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms