RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 C7orf43Q8WVR3 580 aa27.22■■□□□ 1.95
PDXDC1-207ENST00000562119 TMEM88BA6NKF7 163 aa27.21■■□□□ 1.95
PDXDC1-207ENST00000562119 NPHP1O15259 732 aa27.21■■□□□ 1.95
PDXDC1-207ENST00000562119 DIAPH1O60610 1272 aaKnown RBP27.21■■□□□ 1.95
PDXDC1-207ENST00000562119 ST5P78524 1137 aa27.21■■□□□ 1.95
PDXDC1-207ENST00000562119 AIDAQ96BJ3 306 aa27.2■■□□□ 1.94
PDXDC1-207ENST00000562119 TEFQ10587 303 aa27.19■■□□□ 1.94
PDXDC1-207ENST00000562119 WBP1LQ9NX94 342 aa27.19■■□□□ 1.94
PDXDC1-207ENST00000562119 ZNF541Q9H0D2 1346 aa27.18■■□□□ 1.94
PDXDC1-207ENST00000562119 TRIM26Q12899 539 aaPredicted RBP27.18■■□□□ 1.94
PDXDC1-207ENST00000562119 CACNA1SQ13698 1873 aa27.18■■□□□ 1.94
PDXDC1-207ENST00000562119 ARFGEF2Q9Y6D5 1785 aa27.17■■□□□ 1.94
PDXDC1-207ENST00000562119 LBX1P52954 281 aa27.17■■□□□ 1.94
PDXDC1-207ENST00000562119 EAPPQ56P03 285 aaPredicted RBP27.17■■□□□ 1.94
PDXDC1-207ENST00000562119 FMNL2Q96PY5 1086 aa27.17■■□□□ 1.94
PDXDC1-207ENST00000562119 SCN4AP35499 1836 aa27.17■■□□□ 1.94
PDXDC1-207ENST00000562119 GNAT3A8MTJ3 354 aa27.16■■□□□ 1.94
PDXDC1-207ENST00000562119 CCDC93Q567U6 631 aa27.16■■□□□ 1.94
PDXDC1-207ENST00000562119 DZIP3Q86Y13 1208 aaKnown RBP27.16■■□□□ 1.94
PDXDC1-207ENST00000562119 ZNF277Q9NRM2 450 aaPredicted RBP27.16■■□□□ 1.94
PDXDC1-207ENST00000562119 KCNQ3O43525 872 aa27.15■■□□□ 1.94
PDXDC1-207ENST00000562119 PIP4K2AP48426 406 aaPredicted RBP27.15■■□□□ 1.94
PDXDC1-207ENST00000562119 OLFM4Q6UX06 510 aa27.15■■□□□ 1.94
PDXDC1-207ENST00000562119 SIPA1L3O60292 1781 aaPredicted RBP27.14■■□□□ 1.94
PDXDC1-207ENST00000562119 FKBP4Q02790 459 aaKnown RBP eCLIP27.14■■□□□ 1.94
PDXDC1-207ENST00000562119 NPM2Q86SE8 214 aaKnown RBP27.14■■□□□ 1.94
PDXDC1-207ENST00000562119 HACL1Q9UJ83 578 aa27.14■■□□□ 1.94
PDXDC1-207ENST00000562119 BCORQ6W2J9 1755 aa27.14■■□□□ 1.93
PDXDC1-207ENST00000562119 CLSPNQ9HAW4 1339 aa27.14■■□□□ 1.93
PDXDC1-207ENST00000562119 ADAMTSL1Q8N6G6 1762 aa27.13■■□□□ 1.93
PDXDC1-207ENST00000562119 NBPF5PQ86XG9 351 aaPredicted RBP27.13■■□□□ 1.93
PDXDC1-207ENST00000562119 KLRG2A4D1S0 409 aaPredicted RBP27.12■■□□□ 1.93
PDXDC1-207ENST00000562119 RASSF10A6NK89 507 aa27.12■■□□□ 1.93
PDXDC1-207ENST00000562119 NPR1P16066 1061 aa27.12■■□□□ 1.93
PDXDC1-207ENST00000562119 EPHX2P34913 555 aa27.12■■□□□ 1.93
PDXDC1-207ENST00000562119 CLEC11AQ9Y240 323 aa27.12■■□□□ 1.93
PDXDC1-207ENST00000562119 GAS2L2Q8NHY3 880 aa27.11■■□□□ 1.93
PDXDC1-207ENST00000562119 USP16Q9Y5T5 823 aa27.11■■□□□ 1.93
PDXDC1-207ENST00000562119 COL3A1P02461 1466 aaPredicted RBP27.11■■□□□ 1.93
PDXDC1-207ENST00000562119 CEMIPQ8WUJ3 1361 aa27.1■■□□□ 1.93
PDXDC1-207ENST00000562119 HSPA8P11142 646 aaKnown RBP27.1■■□□□ 1.93
PDXDC1-207ENST00000562119 CC2D1BQ5T0F9 858 aaKnown RBP27.1■■□□□ 1.93
PDXDC1-207ENST00000562119 MAP1SQ66K74 1059 aaPredicted RBP27.1■■□□□ 1.93
PDXDC1-207ENST00000562119 CNTROBQ8N137 903 aa27.1■■□□□ 1.93
PDXDC1-207ENST00000562119 RNF123Q5XPI4 1314 aa27.1■■□□□ 1.93
PDXDC1-207ENST00000562119 PRAMEF22A3QJZ6 481 aa27.09■■□□□ 1.93
PDXDC1-207ENST00000562119 PER1O15534 1290 aaPredicted RBP27.09■■□□□ 1.93
PDXDC1-207ENST00000562119 DEFB115Q30KQ5 88 aa27.09■■□□□ 1.93
PDXDC1-207ENST00000562119 CLEC4GQ6UXB4 293 aa27.09■■□□□ 1.93
PDXDC1-207ENST00000562119 BTBD11A6QL63 1104 aa27.08■■□□□ 1.93
PDXDC1-207ENST00000562119 U2SURPO15042 1029 aaKnown RBP27.08■■□□□ 1.93
PDXDC1-207ENST00000562119 ABHD8Q96I13 439 aa27.08■■□□□ 1.93
PDXDC1-207ENST00000562119 FZD9O00144 591 aa27.07■■□□□ 1.92
PDXDC1-207ENST00000562119 SLC34A2O95436 690 aa27.07■■□□□ 1.92
PDXDC1-207ENST00000562119 PNMA8AQ86V59 439 aaPredicted RBP27.07■■□□□ 1.92
PDXDC1-207ENST00000562119 RTKN2Q8IZC4 609 aa27.06■■□□□ 1.92
PDXDC1-207ENST00000562119 KIF7Q2M1P5 1343 aa27.06■■□□□ 1.92
PDXDC1-207ENST00000562119 WDR33Q9C0J8 1336 aaKnown RBP27.06■■□□□ 1.92
PDXDC1-207ENST00000562119 IARSP41252 1262 aaKnown RBP27.05■■□□□ 1.92
PDXDC1-207ENST00000562119 PCGF6Q9BYE7 350 aa27.05■■□□□ 1.92
PDXDC1-207ENST00000562119 FAM161AQ3B820 660 aa27.04■■□□□ 1.92
PDXDC1-207ENST00000562119 TPTE2Q6XPS3 522 aa27.04■■□□□ 1.92
PDXDC1-207ENST00000562119 SYNE4Q8N205 404 aa27.04■■□□□ 1.92
PDXDC1-207ENST00000562119 PHACTR3Q96KR7 559 aa27.04■■□□□ 1.92
PDXDC1-207ENST00000562119 ZNF652Q9Y2D9 606 aa27.04■■□□□ 1.92
PDXDC1-207ENST00000562119 MAP2K1Q02750 393 aaPredicted RBP27.03■■□□□ 1.92
PDXDC1-207ENST00000562119 GPC2Q8N158 579 aa27.03■■□□□ 1.92
PDXDC1-207ENST00000562119 NIP7Q9Y221 180 aaKnown RBP eCLIP27.03■■□□□ 1.92
PDXDC1-207ENST00000562119 SNED1Q8TER0 1413 aa27.02■■□□□ 1.92
PDXDC1-207ENST00000562119 FAM177BA6PVY3 158 aa27.02■■□□□ 1.92
PDXDC1-207ENST00000562119 ABT1Q9ULW3 272 aaKnown RBP27.02■■□□□ 1.92
PDXDC1-207ENST00000562119 NBPF26B4DH59 902 aa27.01■■□□□ 1.91
PDXDC1-207ENST00000562119 NBPF10Q6P3W6 841 aaKnown RBP27.01■■□□□ 1.91
PDXDC1-207ENST00000562119 NBPF15Q8N660 670 aa27.01■■□□□ 1.91
PDXDC1-207ENST00000562119 DDX21Q9NR30 783 aaKnown RBP eCLIP27■■□□□ 1.91
PDXDC1-207ENST00000562119 COL4A5P29400 1685 aa26.99■■□□□ 1.91
PDXDC1-207ENST00000562119 SNRPA1P09661 255 aaKnown RBP26.99■■□□□ 1.91
PDXDC1-207ENST00000562119 ALDH1B1P30837 517 aa26.99■■□□□ 1.91
PDXDC1-207ENST00000562119 FMR1Q06787 632 aaKnown RBP eCLIP26.99■■□□□ 1.915e-6■□□□□ 10.1
PDXDC1-207ENST00000562119 PSMD1Q99460 953 aa26.98■■□□□ 1.91
PDXDC1-207ENST00000562119 RGL2O15211 777 aa26.97■■□□□ 1.91
PDXDC1-207ENST00000562119 PRKAR2BP31323 418 aa26.97■■□□□ 1.91
PDXDC1-207ENST00000562119 HLFQ16534 295 aa26.97■■□□□ 1.91
PDXDC1-207ENST00000562119 LTBP1Q14766 1721 aa26.96■■□□□ 1.91
PDXDC1-207ENST00000562119 CNGB1Q14028 1251 aaPredicted RBP26.96■■□□□ 1.91
PDXDC1-207ENST00000562119 JDP2Q8WYK2 163 aa26.96■■□□□ 1.91
PDXDC1-207ENST00000562119 RSPH6AQ9H0K4 717 aa26.96■■□□□ 1.91
PDXDC1-207ENST00000562119 GJA3Q9Y6H8 435 aa26.96■■□□□ 1.91
PDXDC1-207ENST00000562119 CAPNS2Q96L46 248 aa26.95■■□□□ 1.9
PDXDC1-207ENST00000562119 THSD7BQ9C0I4 1608 aa26.94■■□□□ 1.9
PDXDC1-207ENST00000562119 CRY2Q49AN0 593 aa26.94■■□□□ 1.9
PDXDC1-207ENST00000562119 EPS15P42566 896 aa26.93■■□□□ 1.9
PDXDC1-207ENST00000562119 SCNN1DP51172 638 aa26.93■■□□□ 1.9
PDXDC1-207ENST00000562119 MCM10Q7L590 875 aa26.93■■□□□ 1.9
PDXDC1-207ENST00000562119 ABCC12Q96J65 1359 aa26.93■■□□□ 1.9
PDXDC1-207ENST00000562119 GTF2E1P29083 439 aaPredicted RBP26.92■■□□□ 1.9
PDXDC1-207ENST00000562119 EIF6P56537 245 aaKnown RBP26.92■■□□□ 1.9
PDXDC1-207ENST00000562119 CYP4F22Q6NT55 531 aa26.92■■□□□ 1.9
PDXDC1-207ENST00000562119 SLC51AQ86UW1 340 aa26.92■■□□□ 1.9
PDXDC1-207ENST00000562119 CST9Q5W186 159 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms