RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 ZBTB3Q9H5J0 574 aa12.42□□□□□ -0.42
NSMCE1-203ENST00000562039 GPTP24298 496 aa12.41□□□□□ -0.42
NSMCE1-203ENST00000562039 RASSF7Q02833 373 aa12.41□□□□□ -0.42
NSMCE1-203ENST00000562039 PROSER3Q2NL68 480 aa12.41□□□□□ -0.42
NSMCE1-203ENST00000562039 CNBD1Q8NA66 436 aa12.41□□□□□ -0.42
NSMCE1-203ENST00000562039 NIP7Q9Y221 180 aaKnown RBP eCLIP12.41□□□□□ -0.42
NSMCE1-203ENST00000562039 LAMB4A4D0S4 1761 aa12.41□□□□□ -0.42
NSMCE1-203ENST00000562039 BRCA1P38398 1863 aaKnown RBP12.4□□□□□ -0.42
NSMCE1-203ENST00000562039 H0YIN7 160 aa12.4□□□□□ -0.42
NSMCE1-203ENST00000562039 NBPF5PQ86XG9 351 aaPredicted RBP12.4□□□□□ -0.42
NSMCE1-203ENST00000562039 BCORQ6W2J9 1755 aa12.4□□□□□ -0.42
NSMCE1-203ENST00000562039 NRXN2Q9P2S2 1712 aa12.4□□□□□ -0.43
NSMCE1-203ENST00000562039 ANP32CO43423 234 aa12.39□□□□□ -0.43
NSMCE1-203ENST00000562039 AIMP1Q12904 312 aaKnown RBP12.39□□□□□ -0.43
NSMCE1-203ENST00000562039 MRS2Q9HD23 443 aa12.39□□□□□ -0.43
NSMCE1-203ENST00000562039 ZNF652Q9Y2D9 606 aa12.39□□□□□ -0.43
NSMCE1-203ENST00000562039 SALL2Q9Y467 1007 aaPredicted RBP12.39□□□□□ -0.43
NSMCE1-203ENST00000562039 ANKRD31Q8N7Z5 1873 aa12.39□□□□□ -0.43
NSMCE1-203ENST00000562039 ELL2O00472 640 aaPredicted RBP12.38□□□□□ -0.43
NSMCE1-203ENST00000562039 ST5P78524 1137 aa12.38□□□□□ -0.43
NSMCE1-203ENST00000562039 C9orf131Q5VYM1 1079 aa12.38□□□□□ -0.43
NSMCE1-203ENST00000562039 KIF6Q6ZMV9 814 aa12.38□□□□□ -0.43
NSMCE1-203ENST00000562039 NUTM1Q86Y26 1132 aa12.38□□□□□ -0.43
NSMCE1-203ENST00000562039 TTLL6Q8N841 843 aa12.38□□□□□ -0.43
NSMCE1-203ENST00000562039 GPBP1L1Q9HC44 474 aaPredicted RBP12.38□□□□□ -0.43
NSMCE1-203ENST00000562039 CHL1O00533 1208 aa12.37□□□□□ -0.43
NSMCE1-203ENST00000562039 GTF2E1P29083 439 aaPredicted RBP12.37□□□□□ -0.43
NSMCE1-203ENST00000562039 PDIA6Q15084 440 aa12.37□□□□□ -0.43
NSMCE1-203ENST00000562039 BRIP1Q9BX63 1249 aa12.37□□□□□ -0.43
NSMCE1-203ENST00000562039 RNF181Q9P0P0 153 aa12.37□□□□□ -0.43
NSMCE1-203ENST00000562039 COL11A2P13942 1736 aaPredicted RBP12.37□□□□□ -0.43
NSMCE1-203ENST00000562039 MAP3K15Q6ZN16 1313 aa12.37□□□□□ -0.43
NSMCE1-203ENST00000562039 ADCY9O60503 1353 aa12.36□□□□□ -0.43
NSMCE1-203ENST00000562039 C21orf2O43822 256 aa12.36□□□□□ -0.43
NSMCE1-203ENST00000562039 PDE6BP35913 854 aa12.36□□□□□ -0.43
NSMCE1-203ENST00000562039 MBIPQ9NS73 344 aa12.36□□□□□ -0.43
NSMCE1-203ENST00000562039 ARFGEF1Q9Y6D6 1849 aa12.36□□□□□ -0.43
NSMCE1-203ENST00000562039 CACNA1SQ13698 1873 aa12.36□□□□□ -0.43
NSMCE1-203ENST00000562039 PRELPP51888 382 aa12.35□□□□□ -0.43
NSMCE1-203ENST00000562039 SUSD4Q5VX71 490 aa12.35□□□□□ -0.43
NSMCE1-203ENST00000562039 CLEC4GQ6UXB4 293 aa12.35□□□□□ -0.43
NSMCE1-203ENST00000562039 COPS6Q7L5N1 327 aa12.35□□□□□ -0.43
NSMCE1-203ENST00000562039 XAGE3Q8WTP9 111 aa12.35□□□□□ -0.43
NSMCE1-203ENST00000562039 CHPF2Q9P2E5 772 aa12.35□□□□□ -0.43
NSMCE1-203ENST00000562039 ABCC12Q96J65 1359 aa12.34□□□□□ -0.43
NSMCE1-203ENST00000562039 C1QTNF8P60827 252 aa12.34□□□□□ -0.43
NSMCE1-203ENST00000562039 ERFEQ4G0M1 354 aa12.34□□□□□ -0.43
NSMCE1-203ENST00000562039 HDGFL1Q5TGJ6 251 aa12.34□□□□□ -0.43
NSMCE1-203ENST00000562039 DUSP27Q5VZP5 1158 aa12.34□□□□□ -0.43
NSMCE1-203ENST00000562039 OLFM4Q6UX06 510 aa12.34□□□□□ -0.43
NSMCE1-203ENST00000562039 TPTE2Q6XPS3 522 aa12.34□□□□□ -0.43
NSMCE1-203ENST00000562039 NUP98P52948 1817 aa12.34□□□□□ -0.43
NSMCE1-203ENST00000562039 UBN2Q6ZU65 1347 aa12.34□□□□□ -0.43
NSMCE1-203ENST00000562039 TCERG1O14776 1098 aaKnown RBP12.33□□□□□ -0.44
NSMCE1-203ENST00000562039 SRGNP10124 158 aa12.33□□□□□ -0.44
NSMCE1-203ENST00000562039 LRP10Q7Z4F1 713 aa12.33□□□□□ -0.44
NSMCE1-203ENST00000562039 SLC51AQ86UW1 340 aa12.33□□□□□ -0.44
NSMCE1-203ENST00000562039 FAM9BQ8IZU0 186 aa12.33□□□□□ -0.44
NSMCE1-203ENST00000562039 CFAP44Q96MT7 982 aa12.33□□□□□ -0.44
NSMCE1-203ENST00000562039 NMRK2Q9NPI5 230 aa12.33□□□□□ -0.44
NSMCE1-203ENST00000562039 BABAM1Q9NWV8 329 aa12.33□□□□□ -0.44
NSMCE1-203ENST00000562039 DLEC1Q9Y238 1755 aa12.33□□□□□ -0.44
NSMCE1-203ENST00000562039 SLX4Q8IY92 1834 aa12.32□□□□□ -0.44
NSMCE1-203ENST00000562039 ERVV-1B6SEH8 477 aa12.32□□□□□ -0.44
NSMCE1-203ENST00000562039 NFKBIEO00221 500 aa12.32□□□□□ -0.44
NSMCE1-203ENST00000562039 PRPF40BQ6NWY9 871 aaKnown RBP12.32□□□□□ -0.44
NSMCE1-203ENST00000562039 TSR2Q969E8 191 aaKnown RBP12.32□□□□□ -0.44
NSMCE1-203ENST00000562039 MASTLQ96GX5 879 aa12.32□□□□□ -0.44
NSMCE1-203ENST00000562039 ERBB4Q15303 1308 aa12.32□□□□□ -0.44
NSMCE1-203ENST00000562039 STYK1Q6J9G0 422 aa12.31□□□□□ -0.44
NSMCE1-203ENST00000562039 GIGYF2Q6Y7W6 1299 aaKnown RBP12.31□□□□□ -0.44
NSMCE1-203ENST00000562039 C3orf67Q6ZVT6 689 aa12.31□□□□□ -0.44
NSMCE1-203ENST00000562039 ZNF34Q8IZ26 560 aa12.31□□□□□ -0.44
NSMCE1-203ENST00000562039 SYNE4Q8N205 404 aa12.31□□□□□ -0.44
NSMCE1-203ENST00000562039 C8orf58Q8NAV2 365 aa12.31□□□□□ -0.44
NSMCE1-203ENST00000562039 DDX21Q9NR30 783 aaKnown RBP eCLIP12.31□□□□□ -0.44
NSMCE1-203ENST00000562039 TNRC6CQ9HCJ0 1690 aaKnown RBP12.31□□□□□ -0.44
NSMCE1-203ENST00000562039 CCDC88AQ3V6T2 1871 aa12.3□□□□□ -0.44
NSMCE1-203ENST00000562039 ATP5J2-PTCD1G3V325 749 aa12.3□□□□□ -0.44
NSMCE1-203ENST00000562039 KIF3CO14782 793 aa12.3□□□□□ -0.44
NSMCE1-203ENST00000562039 ZNF853P0CG23 659 aa12.3□□□□□ -0.44
NSMCE1-203ENST00000562039 NPR1P16066 1061 aa12.3□□□□□ -0.44
NSMCE1-203ENST00000562039 GNAI1P63096 354 aa12.3□□□□□ -0.44
NSMCE1-203ENST00000562039 TSPYL6Q8N831 410 aa12.3□□□□□ -0.44
NSMCE1-203ENST00000562039 CNKSR1Q969H4 720 aa12.3□□□□□ -0.44
NSMCE1-203ENST00000562039 IFT57Q9NWB7 429 aa12.3□□□□□ -0.44
NSMCE1-203ENST00000562039 SBF1O95248 1867 aa12.29□□□□□ -0.44
NSMCE1-203ENST00000562039 NTSR2O95665 410 aa12.29□□□□□ -0.44
NSMCE1-203ENST00000562039 RTL5Q5HYW3 569 aaPredicted RBP12.29□□□□□ -0.44
NSMCE1-203ENST00000562039 NYXQ9GZU5 481 aa12.29□□□□□ -0.44
NSMCE1-203ENST00000562039 PHAXQ9H814 394 aaKnown RBP12.29□□□□□ -0.44
NSMCE1-203ENST00000562039 RRAGCQ9HB90 399 aa12.29□□□□□ -0.44
NSMCE1-203ENST00000562039 PDZRN3Q9UPQ7 1066 aa12.29□□□□□ -0.44
NSMCE1-203ENST00000562039 HCLS1P14317 486 aaPredicted RBP12.28□□□□□ -0.44
NSMCE1-203ENST00000562039 LMNB1P20700 586 aa12.28□□□□□ -0.44
NSMCE1-203ENST00000562039 WWC1Q8IX03 1113 aa12.28□□□□□ -0.44
NSMCE1-203ENST00000562039 UTP14AQ9BVJ6 771 aaKnown RBP12.28□□□□□ -0.44
NSMCE1-203ENST00000562039 RGL2O15211 777 aa12.27□□□□□ -0.45
NSMCE1-203ENST00000562039 CALD1Q05682 793 aaKnown RBP12.27□□□□□ -0.45
NSMCE1-203ENST00000562039 TCIRG1Q13488 830 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms