RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 EIF5P55010 431 aaKnown RBP10.95□□□□□ -0.66
GINS3-204ENST00000561952 DDX10Q13206 875 aaKnown RBP10.95□□□□□ -0.66
GINS3-204ENST00000561952 DALRD3Q5D0E6 543 aaKnown RBP10.95□□□□□ -0.66
GINS3-204ENST00000561952 TBC1D9BQ66K14 1250 aa10.95□□□□□ -0.66
GINS3-204ENST00000561952 LAMB4A4D0S4 1761 aa10.95□□□□□ -0.66
GINS3-204ENST00000561952 KDM3BQ7LBC6 1761 aa10.95□□□□□ -0.66
GINS3-204ENST00000561952 MAPK8IP3Q9UPT6 1336 aa10.94□□□□□ -0.66
GINS3-204ENST00000561952 A0A087WZG4 1122 aa10.94□□□□□ -0.66
GINS3-204ENST00000561952 NPHP1O15259 732 aa10.94□□□□□ -0.66
GINS3-204ENST00000561952 THUMPD2Q9BTF0 503 aaKnown RBP10.94□□□□□ -0.66
GINS3-204ENST00000561952 TEX13AQ9BXU3 409 aaPredicted RBP10.94□□□□□ -0.66
GINS3-204ENST00000561952 USP16Q9Y5T5 823 aa10.94□□□□□ -0.66
GINS3-204ENST00000561952 COL11A2P13942 1736 aaPredicted RBP10.94□□□□□ -0.66
GINS3-204ENST00000561952 CCDC88AQ3V6T2 1871 aa10.93□□□□□ -0.66
GINS3-204ENST00000561952 IL6STP40189 918 aaPredicted RBP10.93□□□□□ -0.66
GINS3-204ENST00000561952 SBF1O95248 1867 aa10.92□□□□□ -0.66
GINS3-204ENST00000561952 SNRPA1P09661 255 aaKnown RBP10.92□□□□□ -0.66
GINS3-204ENST00000561952 RASSF7Q02833 373 aa10.92□□□□□ -0.66
GINS3-204ENST00000561952 C9orf131Q5VYM1 1079 aa10.92□□□□□ -0.66
GINS3-204ENST00000561952 DZIP3Q86Y13 1208 aaKnown RBP10.92□□□□□ -0.66
GINS3-204ENST00000561952 C2CD5Q86YS7 1000 aa10.92□□□□□ -0.66
GINS3-204ENST00000561952 FAM177BA6PVY3 158 aa10.91□□□□□ -0.66
GINS3-204ENST00000561952 CAMTA2O94983 1202 aa10.91□□□□□ -0.66
GINS3-204ENST00000561952 TAF7Q15545 349 aaPredicted RBP10.91□□□□□ -0.66
GINS3-204ENST00000561952 NFE2L2Q16236 605 aa10.91□□□□□ -0.66
GINS3-204ENST00000561952 NGEFQ8N5V2 710 aa10.91□□□□□ -0.66
GINS3-204ENST00000561952 PLEKHF1Q96S99 279 aa10.91□□□□□ -0.66
GINS3-204ENST00000561952 RNF181Q9P0P0 153 aa10.91□□□□□ -0.66
GINS3-204ENST00000561952 CEP350Q5VT06 3117 aa10.91□□□□□ -0.66
GINS3-204ENST00000561952 TIAM2Q8IVF5 1701 aa10.9□□□□□ -0.66
GINS3-204ENST00000561952 H0YIN7 160 aa10.9□□□□□ -0.66
GINS3-204ENST00000561952 HTATSF1O43719 755 aaKnown RBP10.9□□□□□ -0.66
GINS3-204ENST00000561952 CLCN6P51797 869 aa10.9□□□□□ -0.66
GINS3-204ENST00000561952 PRR5LQ6MZQ0 368 aa10.9□□□□□ -0.66
GINS3-204ENST00000561952 CCDC146Q8IYE0 955 aa10.9□□□□□ -0.66
GINS3-204ENST00000561952 ZNF622Q969S3 477 aaKnown RBP eCLIP10.9□□□□□ -0.66
GINS3-204ENST00000561952 SETDB2Q96T68 719 aa10.9□□□□□ -0.66
GINS3-204ENST00000561952 NBPF26B4DH59 902 aa10.89□□□□□ -0.67
GINS3-204ENST00000561952 RALBP1Q15311 655 aa10.89□□□□□ -0.67
GINS3-204ENST00000561952 NBPF10Q6P3W6 841 aaKnown RBP10.89□□□□□ -0.67
GINS3-204ENST00000561952 NBPF15Q8N660 670 aa10.89□□□□□ -0.67
GINS3-204ENST00000561952 CNBD1Q8NA66 436 aa10.89□□□□□ -0.67
GINS3-204ENST00000561952 RRP7AQ9Y3A4 280 aaKnown RBP10.89□□□□□ -0.67
GINS3-204ENST00000561952 MYBBP1AQ9BQG0 1328 aaKnown RBP10.88□□□□□ -0.67
GINS3-204ENST00000561952 ST5P78524 1137 aa10.88□□□□□ -0.67
GINS3-204ENST00000561952 NEUROD2Q15784 382 aa10.88□□□□□ -0.67
GINS3-204ENST00000561952 TTLL6Q8N841 843 aa10.88□□□□□ -0.67
GINS3-204ENST00000561952 PNNQ9H307 717 aaKnown RBP10.88□□□□□ -0.67
GINS3-204ENST00000561952 NMRK2Q9NPI5 230 aa10.88□□□□□ -0.67
GINS3-204ENST00000561952 NUP98P52948 1817 aa10.88□□□□□ -0.67
GINS3-204ENST00000561952 SLX4Q8IY92 1834 aa10.87□□□□□ -0.67
GINS3-204ENST00000561952 KIF3CO14782 793 aa10.87□□□□□ -0.67
GINS3-204ENST00000561952 MYL6BP14649 208 aa10.87□□□□□ -0.67
GINS3-204ENST00000561952 RIPK4P57078 832 aa10.87□□□□□ -0.67
GINS3-204ENST00000561952 NBPF5PQ86XG9 351 aaPredicted RBP10.87□□□□□ -0.67
GINS3-204ENST00000561952 TSPYL4Q9UJ04 414 aa10.87□□□□□ -0.67
GINS3-204ENST00000561952 ZNF652Q9Y2D9 606 aa10.87□□□□□ -0.67
GINS3-204ENST00000561952 ARFGEF2Q9Y6D5 1785 aa10.86□□□□□ -0.67
GINS3-204ENST00000561952 C21orf2O43822 256 aa10.86□□□□□ -0.67
GINS3-204ENST00000561952 PDE6BP35913 854 aa10.86□□□□□ -0.67
GINS3-204ENST00000561952 EIF4A1P60842 406 aaKnown RBP10.86□□□□□ -0.67
GINS3-204ENST00000561952 WDR43Q15061 677 aaKnown RBP eCLIP10.86□□□□□ -0.67
GINS3-204ENST00000561952 HLFQ16534 295 aa10.86□□□□□ -0.67
GINS3-204ENST00000561952 PNISRQ8TF01 805 aaKnown RBP10.86□□□□□ -0.67
GINS3-204ENST00000561952 NIP7Q9Y221 180 aaKnown RBP eCLIP10.86□□□□□ -0.67
GINS3-204ENST00000561952 TNRC6CQ9HCJ0 1690 aaKnown RBP10.85□□□□□ -0.67
GINS3-204ENST00000561952 FER1L6Q2WGJ9 1857 aa10.85□□□□□ -0.67
GINS3-204ENST00000561952 PRELPP51888 382 aa10.85□□□□□ -0.67
GINS3-204ENST00000561952 NECTIN2Q92692 538 aa10.85□□□□□ -0.67
GINS3-204ENST00000561952 BRIP1Q9BX63 1249 aa10.85□□□□□ -0.67
GINS3-204ENST00000561952 LAS1LQ9Y4W2 734 aaKnown RBP10.85□□□□□ -0.67
GINS3-204ENST00000561952 NFKBIEO00221 500 aa10.84□□□□□ -0.67
GINS3-204ENST00000561952 CD44P16070 742 aaKnown RBP10.84□□□□□ -0.67
GINS3-204ENST00000561952 EIF2S2P20042 333 aaKnown RBP10.84□□□□□ -0.67
GINS3-204ENST00000561952 TMPOP42166 694 aaKnown RBP10.84□□□□□ -0.67
GINS3-204ENST00000561952 KIF6Q6ZMV9 814 aa10.84□□□□□ -0.67
GINS3-204ENST00000561952 TTLL7Q6ZT98 887 aa10.84□□□□□ -0.67
GINS3-204ENST00000561952 C16orf71Q8IYS4 520 aaPredicted RBP10.84□□□□□ -0.67
GINS3-204ENST00000561952 ZBTB3Q9H5J0 574 aa10.84□□□□□ -0.67
GINS3-204ENST00000561952 KDM2BQ8NHM5 1336 aa10.84□□□□□ -0.67
GINS3-204ENST00000561952 ANXA1P04083 346 aa10.83□□□□□ -0.68
GINS3-204ENST00000561952 HSPA6P17066 643 aa10.83□□□□□ -0.68
GINS3-204ENST00000561952 LMNB1P20700 586 aa10.83□□□□□ -0.68
GINS3-204ENST00000561952 GPTP24298 496 aa10.83□□□□□ -0.68
GINS3-204ENST00000561952 GTF2E1P29083 439 aaPredicted RBP10.83□□□□□ -0.68
GINS3-204ENST00000561952 PRPF40BQ6NWY9 871 aaKnown RBP10.83□□□□□ -0.68
GINS3-204ENST00000561952 RRAGCQ9HB90 399 aa10.83□□□□□ -0.68
GINS3-204ENST00000561952 DICER1Q9UPY3 1922 aaKnown RBP10.83□□□□□ -0.68
GINS3-204ENST00000561952 LMOD3Q0VAK6 560 aa10.82□□□□□ -0.68
GINS3-204ENST00000561952 CLEC4GQ6UXB4 293 aa10.82□□□□□ -0.68
GINS3-204ENST00000561952 NUTM1Q86Y26 1132 aa10.82□□□□□ -0.68
GINS3-204ENST00000561952 MASTLQ96GX5 879 aa10.82□□□□□ -0.68
GINS3-204ENST00000561952 MAP3K15Q6ZN16 1313 aa10.82□□□□□ -0.68
GINS3-204ENST00000561952 ABCC12Q96J65 1359 aa10.81□□□□□ -0.68
GINS3-204ENST00000561952 TOMM70O94826 608 aa10.81□□□□□ -0.68
GINS3-204ENST00000561952 SRGNP10124 158 aa10.81□□□□□ -0.68
GINS3-204ENST00000561952 KRT24Q2M2I5 525 aa10.81□□□□□ -0.68
GINS3-204ENST00000561952 PROSER3Q2NL68 480 aa10.81□□□□□ -0.68
GINS3-204ENST00000561952 STYK1Q6J9G0 422 aa10.81□□□□□ -0.68
GINS3-204ENST00000561952 OLFM4Q6UX06 510 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms