RNA–Protein interactions for RNA: ENST00000561734.5

RPUSD1-202, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-202ENST00000561734 WDR33Q9C0J8 1336 aaKnown RBP24.46■■□□□ 1.51
RPUSD1-202ENST00000561734 AK2P54819 239 aa24.46■■□□□ 1.51
RPUSD1-202ENST00000561734 GDPD2Q9HCC8 539 aa24.46■■□□□ 1.51
RPUSD1-202ENST00000561734 LMOD2Q6P5Q4 547 aa24.45■■□□□ 1.5
RPUSD1-202ENST00000561734 PDLIM2Q96JY6 352 aa24.45■■□□□ 1.5
RPUSD1-202ENST00000561734 LARP6Q9BRS8 491 aaKnown RBP24.45■■□□□ 1.5
RPUSD1-202ENST00000561734 DIAPH3Q9NSV4 1193 aa24.45■■□□□ 1.5
RPUSD1-202ENST00000561734 RUFY3Q7L099 469 aa24.44■■□□□ 1.5
RPUSD1-202ENST00000561734 ECHDC1Q9NTX5 307 aa24.44■■□□□ 1.5
RPUSD1-202ENST00000561734 AXIN2Q9Y2T1 843 aa24.43■■□□□ 1.5
RPUSD1-202ENST00000561734 GADD45BO75293 160 aaPredicted RBP24.43■■□□□ 1.5
RPUSD1-202ENST00000561734 ZNF142P52746 1687 aaPredicted RBP24.43■■□□□ 1.5
RPUSD1-202ENST00000561734 IFIT2P09913 472 aaKnown RBP24.42■■□□□ 1.5
RPUSD1-202ENST00000561734 CPA1P15085 419 aa24.42■■□□□ 1.5
RPUSD1-202ENST00000561734 LIMCH1Q9UPQ0 1083 aa24.42■■□□□ 1.5
RPUSD1-202ENST00000561734 PTH1RQ03431 593 aa24.42■■□□□ 1.5
RPUSD1-202ENST00000561734 USP48Q86UV5 1035 aa24.42■■□□□ 1.5
RPUSD1-202ENST00000561734 ERC1Q8IUD2 1116 aa24.42■■□□□ 1.5
RPUSD1-202ENST00000561734 HYPKQ9NX55 129 aa24.42■■□□□ 1.5
RPUSD1-202ENST00000561734 CAMTA1Q9Y6Y1 1673 aa24.41■■□□□ 1.5
RPUSD1-202ENST00000561734 CASTP20810 708 aaKnown RBP24.41■■□□□ 1.5
RPUSD1-202ENST00000561734 RUFY2Q8WXA3 655 aa24.41■■□□□ 1.5
RPUSD1-202ENST00000561734 GPATCH3Q96I76 525 aa24.41■■□□□ 1.5
RPUSD1-202ENST00000561734 SUCLG2Q96I99 432 aa24.41■■□□□ 1.5
RPUSD1-202ENST00000561734 SIPA1L3O60292 1781 aaPredicted RBP24.41■■□□□ 1.5
RPUSD1-202ENST00000561734 HS1BP3Q53T59 392 aa24.4■■□□□ 1.5
RPUSD1-202ENST00000561734 AACSQ86V21 672 aa24.4■■□□□ 1.5
RPUSD1-202ENST00000561734 KAZALD1Q96I82 304 aa24.4■■□□□ 1.5
RPUSD1-202ENST00000561734 GRM8O00222 908 aa24.39■■□□□ 1.5
RPUSD1-202ENST00000561734 MSNP26038 577 aaKnown RBP24.39■■□□□ 1.5
RPUSD1-202ENST00000561734 LINS1Q8NG48 757 aa24.39■■□□□ 1.5
RPUSD1-202ENST00000561734 SYAP1Q96A49 352 aaPredicted RBP24.39■■□□□ 1.5
RPUSD1-202ENST00000561734 HDAC5Q9UQL6 1122 aa24.39■■□□□ 1.5
RPUSD1-202ENST00000561734 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.39■■□□□ 1.5
RPUSD1-202ENST00000561734 AIMP1Q12904 312 aaKnown RBP24.39■■□□□ 1.49
RPUSD1-202ENST00000561734 RNF214Q8ND24 703 aa24.39■■□□□ 1.49
RPUSD1-202ENST00000561734 LARGE1O95461 756 aa24.38■■□□□ 1.49
RPUSD1-202ENST00000561734 PRPF40BQ6NWY9 871 aaKnown RBP24.38■■□□□ 1.49
RPUSD1-202ENST00000561734 BICC1Q9H694 974 aaKnown RBP24.38■■□□□ 1.49
RPUSD1-202ENST00000561734 ZSCAN22P10073 491 aaPredicted RBP24.37■■□□□ 1.49
RPUSD1-202ENST00000561734 ADCK5Q3MIX3 580 aa24.37■■□□□ 1.49
RPUSD1-202ENST00000561734 EVI5LQ96CN4 794 aa24.37■■□□□ 1.49
RPUSD1-202ENST00000561734 DDX21Q9NR30 783 aaKnown RBP eCLIP24.37■■□□□ 1.49
RPUSD1-202ENST00000561734 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.37■■□□□ 1.49
RPUSD1-202ENST00000561734 SASH1O94885 1247 aa24.37■■□□□ 1.49
RPUSD1-202ENST00000561734 PDIA6Q15084 440 aa24.37■■□□□ 1.49
RPUSD1-202ENST00000561734 TSPY26PQ9H489 355 aa24.37■■□□□ 1.49
RPUSD1-202ENST00000561734 UTYO14607 1347 aa24.37■■□□□ 1.49
RPUSD1-202ENST00000561734 SYT1P21579 422 aa24.36■■□□□ 1.49
RPUSD1-202ENST00000561734 JAKMIP1Q96N16 626 aaKnown RBP24.36■■□□□ 1.49
RPUSD1-202ENST00000561734 CNPY2Q9Y2B0 182 aa24.36■■□□□ 1.49
RPUSD1-202ENST00000561734 TRPM3Q9HCF6 1732 aaPredicted RBP24.36■■□□□ 1.49
RPUSD1-202ENST00000561734 STX6O43752 255 aa24.36■■□□□ 1.49
RPUSD1-202ENST00000561734 DDX58O95786 925 aaKnown RBP24.36■■□□□ 1.49
RPUSD1-202ENST00000561734 TMEM87AQ8NBN3 555 aa24.36■■□□□ 1.49
RPUSD1-202ENST00000561734 SMC3Q9UQE7 1217 aa24.36■■□□□ 1.49
RPUSD1-202ENST00000561734 ADAMTS7Q9UKP4 1686 aa24.35■■□□□ 1.49
RPUSD1-202ENST00000561734 NPHP4O75161 1426 aaPredicted RBP24.35■■□□□ 1.49
RPUSD1-202ENST00000561734 EAF2Q96CJ1 260 aaPredicted RBP24.35■■□□□ 1.49
RPUSD1-202ENST00000561734 PDRG1Q9NUG6 133 aa24.35■■□□□ 1.49
RPUSD1-202ENST00000561734 NOL7Q9UMY1 257 aaKnown RBP24.35■■□□□ 1.49
RPUSD1-202ENST00000561734 KCNB2Q92953 911 aa24.34■■□□□ 1.49
RPUSD1-202ENST00000561734 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.34■■□□□ 1.49
RPUSD1-202ENST00000561734 CCDC171Q6TFL3 1326 aa24.33■■□□□ 1.49
RPUSD1-202ENST00000561734 IGKV5-2P06315 115 aa24.33■■□□□ 1.49
RPUSD1-202ENST00000561734 G3BP1Q13283 466 aaKnown RBP eCLIP24.33■■□□□ 1.49
RPUSD1-202ENST00000561734 SLC39A6Q13433 755 aa24.33■■□□□ 1.49
RPUSD1-202ENST00000561734 VPS53Q5VIR6 699 aa24.33■■□□□ 1.49
RPUSD1-202ENST00000561734 KRT28Q7Z3Y7 464 aa24.33■■□□□ 1.49
RPUSD1-202ENST00000561734 CCDC83Q8IWF9 413 aa24.33■■□□□ 1.49
RPUSD1-202ENST00000561734 CCDC8Q9H0W5 538 aaPredicted RBP24.33■■□□□ 1.49
RPUSD1-202ENST00000561734 ZSWIM6Q9HCJ5 1215 aa24.33■■□□□ 1.49
RPUSD1-202ENST00000561734 LMTK3Q96Q04 1460 aa24.33■■□□□ 1.49
RPUSD1-202ENST00000561734 ERBB3P21860 1342 aa24.33■■□□□ 1.49
RPUSD1-202ENST00000561734 PHF14O94880 888 aa24.33■■□□□ 1.48
RPUSD1-202ENST00000561734 NECTIN1Q15223 517 aa24.33■■□□□ 1.48
RPUSD1-202ENST00000561734 FAM227BQ96M60 508 aa24.33■■□□□ 1.48
RPUSD1-202ENST00000561734 TLR7Q9NYK1 1049 aaKnown RBP24.33■■□□□ 1.48
RPUSD1-202ENST00000561734 RGPD5Q99666 1765 aa24.33■■□□□ 1.48
RPUSD1-202ENST00000561734 TM6SF1Q9BZW5 370 aa24.32■■□□□ 1.48
RPUSD1-202ENST00000561734 TCHHQ07283 1943 aa24.32■■□□□ 1.48
RPUSD1-202ENST00000561734 DTNBO60941 627 aa24.32■■□□□ 1.48
RPUSD1-202ENST00000561734 F13A1P00488 732 aa24.32■■□□□ 1.48
RPUSD1-202ENST00000561734 ZNF790Q6PG37 636 aa24.32■■□□□ 1.48
RPUSD1-202ENST00000561734 RIC3Q7Z5B4 369 aa24.32■■□□□ 1.48
RPUSD1-202ENST00000561734 SIL1Q9H173 461 aa24.32■■□□□ 1.48
RPUSD1-202ENST00000561734 CYP46A1Q9Y6A2 500 aa24.32■■□□□ 1.48
RPUSD1-202ENST00000561734 NMIQ13287 307 aaPredicted RBP24.31■■□□□ 1.48
RPUSD1-202ENST00000561734 DDX54Q8TDD1 881 aaKnown RBP24.31■■□□□ 1.48
RPUSD1-202ENST00000561734 RBM8AQ9Y5S9 174 aaKnown RBP24.31■■□□□ 1.48
RPUSD1-202ENST00000561734 C5P01031 1676 aa24.31■■□□□ 1.48
RPUSD1-202ENST00000561734 MYL6BP14649 208 aa24.3■■□□□ 1.48
RPUSD1-202ENST00000561734 GJB2P29033 226 aa24.3■■□□□ 1.48
RPUSD1-202ENST00000561734 ZC3H6P61129 1189 aaKnown RBP24.3■■□□□ 1.48
RPUSD1-202ENST00000561734 KLHDC4Q8TBB5 520 aa24.3■■□□□ 1.48
RPUSD1-202ENST00000561734 KDM6AO15550 1401 aaPredicted RBP24.29■■□□□ 1.48
RPUSD1-202ENST00000561734 OFD1O75665 1012 aa24.29■■□□□ 1.48
RPUSD1-202ENST00000561734 CREB3L3Q68CJ9 461 aa24.29■■□□□ 1.48
RPUSD1-202ENST00000561734 PRKCSHP14314 528 aaPredicted RBP24.29■■□□□ 1.48
RPUSD1-202ENST00000561734 ST3GAL1Q11201 340 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms