RNA–Protein interactions for RNA: ENST00000561317.1

SPRED1-203, Transcript of sprouty related EVH1 domain containing 1, humanhuman

TSL 4

Gene SPRED1, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-203ENST00000561317 TATP17735 454 aaPredicted RBP9.11□□□□□ -0.95
SPRED1-203ENST00000561317 HOXC9P31274 260 aa9.11□□□□□ -0.95
SPRED1-203ENST00000561317 HSP90AB2PQ58FF8 381 aa9.11□□□□□ -0.95
SPRED1-203ENST00000561317 NBPF6Q5VWK0 638 aa9.11□□□□□ -0.95
SPRED1-203ENST00000561317 JMYQ8N9B5 988 aa9.11□□□□□ -0.95
SPRED1-203ENST00000561317 PNISRQ8TF01 805 aaKnown RBP9.11□□□□□ -0.95
SPRED1-203ENST00000561317 NBPF4Q96M43 638 aa9.11□□□□□ -0.95
SPRED1-203ENST00000561317 ZSWIM6Q9HCJ5 1215 aa9.11□□□□□ -0.95
SPRED1-203ENST00000561317 RTL1A6NKG5 1358 aa9.11□□□□□ -0.95
SPRED1-203ENST00000561317 FLT4P35916 1363 aa9.11□□□□□ -0.95
SPRED1-203ENST00000561317 USP54Q70EL1 1684 aa9.1□□□□□ -0.95
SPRED1-203ENST00000561317 DIAPH1O60610 1272 aaKnown RBP9.1□□□□□ -0.95
SPRED1-203ENST00000561317 MMP10P09238 476 aa9.1□□□□□ -0.95
SPRED1-203ENST00000561317 VARS2Q5ST30 1063 aaKnown RBP9.1□□□□□ -0.95
SPRED1-203ENST00000561317 C9orf131Q5VYM1 1079 aa9.1□□□□□ -0.95
SPRED1-203ENST00000561317 PTCD2Q8WV60 388 aaKnown RBP9.1□□□□□ -0.95
SPRED1-203ENST00000561317 SMARCC1Q92922 1105 aaPredicted RBP9.1□□□□□ -0.95
SPRED1-203ENST00000561317 RRAGCQ9HB90 399 aa9.1□□□□□ -0.95
SPRED1-203ENST00000561317 NUDCQ9Y266 331 aa9.1□□□□□ -0.95
SPRED1-203ENST00000561317 ANKRD26Q9UPS8 1709 aa9.1□□□□□ -0.95
SPRED1-203ENST00000561317 C5P01031 1676 aa9.1□□□□□ -0.95
SPRED1-203ENST00000561317 RGPD2P0DJD1 1756 aa9.09□□□□□ -0.95
SPRED1-203ENST00000561317 WDR90Q96KV7 1748 aa9.09□□□□□ -0.95
SPRED1-203ENST00000561317 POTEB3A0JP26 581 aa9.09□□□□□ -0.95
SPRED1-203ENST00000561317 GNPATO15228 680 aa9.09□□□□□ -0.95
SPRED1-203ENST00000561317 DPEP1P16444 411 aa9.09□□□□□ -0.95
SPRED1-203ENST00000561317 IL13P35225 146 aa9.09□□□□□ -0.95
SPRED1-203ENST00000561317 FSTL1Q12841 308 aa9.09□□□□□ -0.95
SPRED1-203ENST00000561317 WDR43Q15061 677 aaKnown RBP eCLIP9.09□□□□□ -0.95
SPRED1-203ENST00000561317 PDIA6Q15084 440 aa9.09□□□□□ -0.95
SPRED1-203ENST00000561317 ARSIQ5FYB1 569 aa9.09□□□□□ -0.95
SPRED1-203ENST00000561317 POTEBQ6S5H4 581 aa9.09□□□□□ -0.95
SPRED1-203ENST00000561317 FAM9BQ8IZU0 186 aa9.09□□□□□ -0.95
SPRED1-203ENST00000561317 LINC00116Q8NCU8 138 aa9.09□□□□□ -0.95
SPRED1-203ENST00000561317 MEGF6O75095 1541 aa9.09□□□□□ -0.95
SPRED1-203ENST00000561317 U2SURPO15042 1029 aaKnown RBP9.08□□□□□ -0.96
SPRED1-203ENST00000561317 SSFA2P28290 1259 aa9.08□□□□□ -0.96
SPRED1-203ENST00000561317 TGFB2P61812 414 aa9.08□□□□□ -0.96
SPRED1-203ENST00000561317 EIF4A2Q14240 407 aaKnown RBP9.08□□□□□ -0.96
SPRED1-203ENST00000561317 PIGBQ92521 554 aa9.08□□□□□ -0.96
SPRED1-203ENST00000561317 N4BP2Q86UW6 1770 aaPredicted RBP9.07□□□□□ -0.96
SPRED1-203ENST00000561317 LOC102724428A0A0B4J2F2 783 aa9.07□□□□□ -0.96
SPRED1-203ENST00000561317 HSPA1AP0DMV8 641 aaKnown RBP9.07□□□□□ -0.96
SPRED1-203ENST00000561317 HSPA1BP0DMV9 641 aaKnown RBP9.07□□□□□ -0.96
SPRED1-203ENST00000561317 U2AF1L5P0DN76 240 aaPredicted RBP9.07□□□□□ -0.96
SPRED1-203ENST00000561317 ATP6V1AP38606 617 aa9.07□□□□□ -0.96
SPRED1-203ENST00000561317 SIK1P57059 783 aa9.07□□□□□ -0.96
SPRED1-203ENST00000561317 U2AF1Q01081 240 aaKnown RBP eCLIP9.07□□□□□ -0.96
SPRED1-203ENST00000561317 RNF181Q9P0P0 153 aa9.07□□□□□ -0.96
SPRED1-203ENST00000561317 ADAMTS8Q9UP79 889 aa9.07□□□□□ -0.96
SPRED1-203ENST00000561317 C4BP0C0L5 1744 aa9.07□□□□□ -0.96
SPRED1-203ENST00000561317 TAF1LQ8IZX4 1826 aa9.07□□□□□ -0.96
SPRED1-203ENST00000561317 COL3A1P02461 1466 aaPredicted RBP9.07□□□□□ -0.96
SPRED1-203ENST00000561317 KDM2BQ8NHM5 1336 aa9.06□□□□□ -0.96
SPRED1-203ENST00000561317 PCDH11XQ9BZA7 1347 aa9.06□□□□□ -0.96
SPRED1-203ENST00000561317 PCDH11YQ9BZA8 1340 aa9.06□□□□□ -0.96
SPRED1-203ENST00000561317 SPDYE16A6NNV3 312 aaPredicted RBP9.06□□□□□ -0.96
SPRED1-203ENST00000561317 TRAPPC3LQ5T215 181 aa9.06□□□□□ -0.96
SPRED1-203ENST00000561317 SPNS2Q8IVW8 549 aa9.06□□□□□ -0.96
SPRED1-203ENST00000561317 CCDC87Q9NVE4 849 aa9.06□□□□□ -0.96
SPRED1-203ENST00000561317 FAM208AQ9UK61 1670 aaKnown RBP9.05□□□□□ -0.96
SPRED1-203ENST00000561317 PXDNLA1KZ92 1463 aa9.05□□□□□ -0.96
SPRED1-203ENST00000561317 CYP27B1O15528 508 aa9.05□□□□□ -0.96
SPRED1-203ENST00000561317 MAP3K9P80192 1104 aa9.05□□□□□ -0.96
SPRED1-203ENST00000561317 ITPK1Q13572 414 aa9.05□□□□□ -0.96
SPRED1-203ENST00000561317 GPR153Q6NV75 609 aa9.05□□□□□ -0.96
SPRED1-203ENST00000561317 SMC1BQ8NDV3 1235 aa9.05□□□□□ -0.96
SPRED1-203ENST00000561317 EYA1Q99502 592 aa9.05□□□□□ -0.96
SPRED1-203ENST00000561317 ASAP1Q9ULH1 1129 aa9.05□□□□□ -0.96
SPRED1-203ENST00000561317 PARP3Q9Y6F1 533 aa9.05□□□□□ -0.96
SPRED1-203ENST00000561317 KCPQ6ZWJ8 1503 aa9.05□□□□□ -0.96
SPRED1-203ENST00000561317 UBR3Q6ZT12 1888 aa9.04□□□□□ -0.96
SPRED1-203ENST00000561317 TESPA1A2RU30 521 aaPredicted RBP9.04□□□□□ -0.96
SPRED1-203ENST00000561317 SEMA3EO15041 775 aa9.04□□□□□ -0.96
SPRED1-203ENST00000561317 HMOX1P09601 288 aa9.04□□□□□ -0.96
SPRED1-203ENST00000561317 NLGN1Q8N2Q7 840 aa9.04□□□□□ -0.96
SPRED1-203ENST00000561317 KHSRPQ92945 711 aaKnown RBP eCLIP9.04□□□□□ -0.968e-7■■□□□ 13.7
SPRED1-203ENST00000561317 KRTAP3-3Q9BYR6 98 aa9.04□□□□□ -0.96
SPRED1-203ENST00000561317 KRTAP3-2Q9BYR7 98 aa9.04□□□□□ -0.96
SPRED1-203ENST00000561317 TMOD3Q9NYL9 352 aa9.04□□□□□ -0.96
SPRED1-203ENST00000561317 PIM2Q9P1W9 311 aa9.04□□□□□ -0.96
SPRED1-203ENST00000561317 PCDHGA4Q9Y5G9 962 aa9.04□□□□□ -0.96
SPRED1-203ENST00000561317 TBC1D12O60347 775 aa9.03□□□□□ -0.96
SPRED1-203ENST00000561317 RFC4P35249 363 aa9.03□□□□□ -0.96
SPRED1-203ENST00000561317 MMRN1Q13201 1228 aa9.03□□□□□ -0.96
SPRED1-203ENST00000561317 DALRD3Q5D0E6 543 aaKnown RBP9.03□□□□□ -0.96
SPRED1-203ENST00000561317 SULT6B1Q6IMI4 303 aa9.03□□□□□ -0.96
SPRED1-203ENST00000561317 PNNQ9H307 717 aaKnown RBP9.03□□□□□ -0.96
SPRED1-203ENST00000561317 RTCBQ9Y3I0 505 aaKnown RBP9.03□□□□□ -0.96
SPRED1-203ENST00000561317 KCNA3P22001 575 aa9.02□□□□□ -0.97
SPRED1-203ENST00000561317 AEBP1Q8IUX7 1158 aa9.02□□□□□ -0.97
SPRED1-203ENST00000561317 CCDC146Q8IYE0 955 aa9.02□□□□□ -0.97
SPRED1-203ENST00000561317 RUNDC1Q96C34 613 aa9.02□□□□□ -0.97
SPRED1-203ENST00000561317 RSPH6AQ9H0K4 717 aa9.02□□□□□ -0.97
SPRED1-203ENST00000561317 ITGB4P16144 1822 aa9.02□□□□□ -0.97
SPRED1-203ENST00000561317 TOGARAM1Q9Y4F4 1720 aa9.02□□□□□ -0.97
SPRED1-203ENST00000561317 CICQ96RK0 1608 aaPredicted RBP9.02□□□□□ -0.97
SPRED1-203ENST00000561317 PLEKHG2Q9H7P9 1386 aa9.01□□□□□ -0.97
SPRED1-203ENST00000561317 PCNTO95613 3336 aa9.01□□□□□ -0.97
SPRED1-203ENST00000561317 NEFMP07197 916 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms