RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 KLF15Q9UIH9 416 aa8.11□□□□□ -1.11
CASC4-211ENST00000561305 NEURL1BA8MQ27 555 aa8.1□□□□□ -1.11
CASC4-211ENST00000561305 C21orf2O43822 256 aa8.1□□□□□ -1.11
CASC4-211ENST00000561305 STAG2Q8N3U4 1231 aa8.1□□□□□ -1.11
CASC4-211ENST00000561305 DCAF5Q96JK2 942 aa8.1□□□□□ -1.11
CASC4-211ENST00000561305 BTBD6Q96KE9 485 aa8.1□□□□□ -1.11
CASC4-211ENST00000561305 MARK1Q9P0L2 795 aa8.1□□□□□ -1.11
CASC4-211ENST00000561305 RBM19Q9Y4C8 960 aaKnown RBP8.1□□□□□ -1.11
CASC4-211ENST00000561305 ADH6P28332 368 aa8.09□□□□□ -1.11
CASC4-211ENST00000561305 SEC13P55735 322 aa8.09□□□□□ -1.11
CASC4-211ENST00000561305 PTK7Q13308 1070 aa8.09□□□□□ -1.11
CASC4-211ENST00000561305 LRRC69Q6ZNQ3 347 aa8.09□□□□□ -1.11
CASC4-211ENST00000561305 MKL2Q9ULH7 1088 aa8.09□□□□□ -1.11
CASC4-211ENST00000561305 CHMP3Q9Y3E7 222 aa8.09□□□□□ -1.11
CASC4-211ENST00000561305 IGHA1P01876 353 aa8.08□□□□□ -1.12
CASC4-211ENST00000561305 ZNF468Q5VIY5 522 aaPredicted RBP8.08□□□□□ -1.12
CASC4-211ENST00000561305 LARP1Q6PKG0 1096 aaKnown RBP8.08□□□□□ -1.12
CASC4-211ENST00000561305 LINC00114Q6XXX2 140 aa8.08□□□□□ -1.12
CASC4-211ENST00000561305 GAS2L2Q8NHY3 880 aa8.08□□□□□ -1.12
CASC4-211ENST00000561305 RHPN1Q8TCX5 695 aa8.08□□□□□ -1.12
CASC4-211ENST00000561305 PHACTR1Q9C0D0 580 aa8.08□□□□□ -1.12
CASC4-211ENST00000561305 HCN4Q9Y3Q4 1203 aa8.08□□□□□ -1.12
CASC4-211ENST00000561305 ATAD2Q6PL18 1390 aa8.08□□□□□ -1.12
CASC4-211ENST00000561305 PPP1R12BO60237 982 aaPredicted RBP8.07□□□□□ -1.12
CASC4-211ENST00000561305 CRTC2Q53ET0 693 aaPredicted RBP8.07□□□□□ -1.12
CASC4-211ENST00000561305 FCHSD1Q86WN1 690 aa8.07□□□□□ -1.12
CASC4-211ENST00000561305 C2orf49Q9BVC5 232 aaPredicted RBP8.07□□□□□ -1.12
CASC4-211ENST00000561305 NEUROD4Q9HD90 331 aa8.07□□□□□ -1.12
CASC4-211ENST00000561305 FAM196BA6NMK8 535 aa8.06□□□□□ -1.12
CASC4-211ENST00000561305 LMOD1P29536 600 aaPredicted RBP8.06□□□□□ -1.12
CASC4-211ENST00000561305 GPAT2Q6NUI2 795 aa8.06□□□□□ -1.12
CASC4-211ENST00000561305 VRTNQ9H8Y1 702 aa8.06□□□□□ -1.12
CASC4-211ENST00000561305 RRAGCQ9HB90 399 aa8.06□□□□□ -1.12
CASC4-211ENST00000561305 PRR12Q9ULL5 1215 aa8.06□□□□□ -1.12
CASC4-211ENST00000561305 LOC100996750A0A140TA64 210 aa8.05□□□□□ -1.12
CASC4-211ENST00000561305 ITGB2P05107 769 aa8.05□□□□□ -1.12
CASC4-211ENST00000561305 AMPD1P23109 780 aa8.05□□□□□ -1.12
CASC4-211ENST00000561305 DGKGP49619 791 aa8.05□□□□□ -1.12
CASC4-211ENST00000561305 PCBP4P57723 403 aaKnown RBP8.05□□□□□ -1.12
CASC4-211ENST00000561305 DPYDQ12882 1025 aa8.05□□□□□ -1.12
CASC4-211ENST00000561305 SCG3Q8WXD2 468 aaKnown RBP8.05□□□□□ -1.12
CASC4-211ENST00000561305 MDFIQ99750 246 aa8.05□□□□□ -1.12
CASC4-211ENST00000561305 KRTAP4-6Q9BYQ5 205 aa8.05□□□□□ -1.12
CASC4-211ENST00000561305 ANKIB1Q9P2G1 1089 aa8.05□□□□□ -1.12
CASC4-211ENST00000561305 USP17L15C9J2P7 530 aa8.04□□□□□ -1.12
CASC4-211ENST00000561305 USP17L10C9JJH3 530 aa8.04□□□□□ -1.12
CASC4-211ENST00000561305 USP17L13C9JLJ4 530 aa8.04□□□□□ -1.12
CASC4-211ENST00000561305 USP17L12C9JPN9 530 aa8.04□□□□□ -1.12
CASC4-211ENST00000561305 USP17L11C9JVI0 530 aa8.04□□□□□ -1.12
CASC4-211ENST00000561305 USP17L21D6R901 530 aa8.04□□□□□ -1.12
CASC4-211ENST00000561305 USP17L18D6R9N7 530 aa8.04□□□□□ -1.12
CASC4-211ENST00000561305 USP17L22D6RA61 530 aa8.04□□□□□ -1.12
CASC4-211ENST00000561305 USP17L17D6RBQ6 530 aa8.04□□□□□ -1.12
CASC4-211ENST00000561305 USP17L19D6RCP7 530 aa8.04□□□□□ -1.12
CASC4-211ENST00000561305 USP17L20D6RJB6 530 aa8.04□□□□□ -1.12
CASC4-211ENST00000561305 USP17L24Q0WX57 530 aa8.04□□□□□ -1.12
CASC4-211ENST00000561305 SFSWAPQ12872 951 aaKnown RBP8.04□□□□□ -1.12
CASC4-211ENST00000561305 PLA2G4EQ3MJ16 856 aa8.04□□□□□ -1.12
CASC4-211ENST00000561305 CHSY3Q70JA7 882 aa8.04□□□□□ -1.12
CASC4-211ENST00000561305 ALYREFQ86V81 257 aaKnown RBP8.04□□□□□ -1.12
CASC4-211ENST00000561305 ANKMY2Q8IV38 441 aa8.04□□□□□ -1.12
CASC4-211ENST00000561305 ALDH16A1Q8IZ83 802 aa8.04□□□□□ -1.12
CASC4-211ENST00000561305 ZNF777Q9ULD5 760 aaPredicted RBP8.04□□□□□ -1.12
CASC4-211ENST00000561305 COL8A1P27658 744 aa8.03□□□□□ -1.12
CASC4-211ENST00000561305 KCNQ4P56696 695 aa8.03□□□□□ -1.12
CASC4-211ENST00000561305 GRIN2CQ14957 1233 aa8.03□□□□□ -1.12
CASC4-211ENST00000561305 CFAP70Q5T0N1 1121 aa8.03□□□□□ -1.12
CASC4-211ENST00000561305 ZNF280CQ8ND82 737 aa8.03□□□□□ -1.12
CASC4-211ENST00000561305 HSH2DQ96JZ2 352 aa8.03□□□□□ -1.12
CASC4-211ENST00000561305 SUSD3Q96L08 255 aa8.03□□□□□ -1.12
CASC4-211ENST00000561305 ARXQ96QS3 562 aa8.03□□□□□ -1.12
CASC4-211ENST00000561305 PIK3R2O00459 728 aa8.02□□□□□ -1.13
CASC4-211ENST00000561305 SIN3BO75182 1162 aa8.02□□□□□ -1.13
CASC4-211ENST00000561305 IGFBP4P22692 258 aa8.02□□□□□ -1.13
CASC4-211ENST00000561305 TYRO3Q06418 890 aa8.02□□□□□ -1.13
CASC4-211ENST00000561305 SYT9Q86SS6 491 aa8.02□□□□□ -1.13
CASC4-211ENST00000561305 SLC30A3Q99726 388 aa8.02□□□□□ -1.13
CASC4-211ENST00000561305 HINFPQ9BQA5 517 aa8.02□□□□□ -1.13
CASC4-211ENST00000561305 SUV39H2Q9H5I1 410 aa8.02□□□□□ -1.13
CASC4-211ENST00000561305 ELOA3CA0A087WX78 387 aaPredicted RBP8.01□□□□□ -1.13
CASC4-211ENST00000561305 KRBA1A5PL33 1030 aa8.01□□□□□ -1.13
CASC4-211ENST00000561305 ELOA3DA6NLF2 546 aaPredicted RBP8.01□□□□□ -1.13
CASC4-211ENST00000561305 GNB5O14775 395 aa8.01□□□□□ -1.13
CASC4-211ENST00000561305 ELOA3BQ3SY89 546 aa8.01□□□□□ -1.13
CASC4-211ENST00000561305 ELOA3Q8NG57 546 aa8.01□□□□□ -1.13
CASC4-211ENST00000561305 CEP63Q96MT8 703 aa8.01□□□□□ -1.13
CASC4-211ENST00000561305 BRD7Q9NPI1 651 aa8.01□□□□□ -1.13
CASC4-211ENST00000561305 ADARB2-AS1A8MUL3 147 aa8□□□□□ -1.13
CASC4-211ENST00000561305 HIF1AQ16665 826 aa8□□□□□ -1.13
CASC4-211ENST00000561305 CHMP7Q8WUX9 453 aaPredicted RBP8□□□□□ -1.13
CASC4-211ENST00000561305 KCNH4Q9UQ05 1017 aa8□□□□□ -1.13
CASC4-211ENST00000561305 MSTNO14793 375 aa7.99□□□□□ -1.13
CASC4-211ENST00000561305 SPEM2Q0P670 501 aa7.99□□□□□ -1.13
CASC4-211ENST00000561305 RTN1Q16799 776 aa7.99□□□□□ -1.13
CASC4-211ENST00000561305 TNFRSF25Q93038 417 aa7.99□□□□□ -1.13
CASC4-211ENST00000561305 SPOCK3Q9BQ16 436 aa7.99□□□□□ -1.13
CASC4-211ENST00000561305 LGR5O75473 907 aa7.98□□□□□ -1.13
CASC4-211ENST00000561305 PROCP04070 461 aa7.98□□□□□ -1.13
CASC4-211ENST00000561305 WEE1P30291 646 aa7.98□□□□□ -1.13
CASC4-211ENST00000561305 SUZ12Q15022 739 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms