RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 PHAXQ9H814 394 aaKnown RBP13.2□□□□□ -0.3
LRRC28-221ENST00000561276 HYPKQ9NX55 129 aa13.2□□□□□ -0.3
LRRC28-221ENST00000561276 NUP98P52948 1817 aa13.19□□□□□ -0.3
LRRC28-221ENST00000561276 ZPR1O75312 459 aa13.19□□□□□ -0.3
LRRC28-221ENST00000561276 DZIP3Q86Y13 1208 aaKnown RBP13.19□□□□□ -0.3
LRRC28-221ENST00000561276 ZNF428Q96B54 188 aa13.19□□□□□ -0.3
LRRC28-221ENST00000561276 NARFQ9UHQ1 456 aa13.19□□□□□ -0.3
LRRC28-221ENST00000561276 CASZ1Q86V15 1759 aa13.18□□□□□ -0.3
LRRC28-221ENST00000561276 TTLL7Q6ZT98 887 aa13.18□□□□□ -0.3
LRRC28-221ENST00000561276 XAGE3Q8WTP9 111 aa13.18□□□□□ -0.3
LRRC28-221ENST00000561276 SRP68Q9UHB9 627 aaKnown RBP13.18□□□□□ -0.3
LRRC28-221ENST00000561276 MYCNP04198 464 aaPredicted RBP13.17□□□□□ -0.3
LRRC28-221ENST00000561276 RARSP54136 660 aaKnown RBP13.17□□□□□ -0.3
LRRC28-221ENST00000561276 ALDH1L2Q3SY69 923 aa13.17□□□□□ -0.3
LRRC28-221ENST00000561276 USPL1Q5W0Q7 1092 aa13.17□□□□□ -0.3
LRRC28-221ENST00000561276 ANKRD13DQ6ZTN6 518 aa13.17□□□□□ -0.3
LRRC28-221ENST00000561276 G2E3Q7L622 706 aa13.17□□□□□ -0.3
LRRC28-221ENST00000561276 SLC16A10Q8TF71 515 aa13.17□□□□□ -0.3
LRRC28-221ENST00000561276 SSH1Q8WYL5 1049 aa13.17□□□□□ -0.3
LRRC28-221ENST00000561276 USP42Q9H9J4 1324 aaKnown RBP13.16□□□□□ -0.3
LRRC28-221ENST00000561276 KIF6Q6ZMV9 814 aa13.16□□□□□ -0.3
LRRC28-221ENST00000561276 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
LRRC28-221ENST00000561276 BCL2L13Q9BXK5 485 aa13.16□□□□□ -0.3
LRRC28-221ENST00000561276 BCORQ6W2J9 1755 aa13.16□□□□□ -0.3
LRRC28-221ENST00000561276 ERVV-1B6SEH8 477 aa13.15□□□□□ -0.3
LRRC28-221ENST00000561276 CAMTA2O94983 1202 aa13.15□□□□□ -0.3
LRRC28-221ENST00000561276 GYS1P13807 737 aa13.15□□□□□ -0.3
LRRC28-221ENST00000561276 POTEHQ6S545 545 aa13.15□□□□□ -0.3
LRRC28-221ENST00000561276 ZBTB3Q9H5J0 574 aa13.15□□□□□ -0.3
LRRC28-221ENST00000561276 SMC4Q9NTJ3 1288 aa13.15□□□□□ -0.3
LRRC28-221ENST00000561276 ARFGEF2Q9Y6D5 1785 aa13.15□□□□□ -0.31
LRRC28-221ENST00000561276 MAP3K15Q6ZN16 1313 aa13.14□□□□□ -0.31
LRRC28-221ENST00000561276 BCAR3O75815 825 aa13.14□□□□□ -0.31
LRRC28-221ENST00000561276 ZBTB7AO95365 584 aa13.14□□□□□ -0.31
LRRC28-221ENST00000561276 FLIIQ13045 1269 aa13.14□□□□□ -0.31
LRRC28-221ENST00000561276 FKBP8Q14318 412 aa13.14□□□□□ -0.31
LRRC28-221ENST00000561276 HLFQ16534 295 aa13.14□□□□□ -0.31
LRRC28-221ENST00000561276 NLGN1Q8N2Q7 840 aa13.14□□□□□ -0.31
LRRC28-221ENST00000561276 PLBD2Q8NHP8 589 aa13.14□□□□□ -0.31
LRRC28-221ENST00000561276 BCL2L12Q9HB09 334 aa13.14□□□□□ -0.31
LRRC28-221ENST00000561276 ATF5Q9Y2D1 282 aaPredicted RBP13.14□□□□□ -0.31
LRRC28-221ENST00000561276 SCN7AQ01118 1682 aa13.14□□□□□ -0.31
LRRC28-221ENST00000561276 DDX58O95786 925 aaKnown RBP13.13□□□□□ -0.31
LRRC28-221ENST00000561276 FKBP5Q13451 457 aaPredicted RBP13.13□□□□□ -0.31
LRRC28-221ENST00000561276 MSL1Q68DK7 614 aa13.13□□□□□ -0.31
LRRC28-221ENST00000561276 CLEC4GQ6UXB4 293 aa13.13□□□□□ -0.31
LRRC28-221ENST00000561276 KSR2Q6VAB6 950 aa13.13□□□□□ -0.31
LRRC28-221ENST00000561276 GIGYF2Q6Y7W6 1299 aaKnown RBP13.13□□□□□ -0.31
LRRC28-221ENST00000561276 RIC3Q7Z5B4 369 aa13.13□□□□□ -0.31
LRRC28-221ENST00000561276 MTFR1LQ9H019 292 aa13.13□□□□□ -0.31
LRRC28-221ENST00000561276 COL24A1Q17RW2 1714 aa13.13□□□□□ -0.31
LRRC28-221ENST00000561276 ANKRD36CQ5JPF3 1778 aa13.12□□□□□ -0.31
LRRC28-221ENST00000561276 PI4KAP2A4QPH2 592 aa13.12□□□□□ -0.31
LRRC28-221ENST00000561276 TM4SF1P30408 202 aa13.12□□□□□ -0.31
LRRC28-221ENST00000561276 BRPF1P55201 1214 aaPredicted RBP13.12□□□□□ -0.31
LRRC28-221ENST00000561276 PI4KAP1Q8N8J0 262 aa13.12□□□□□ -0.31
LRRC28-221ENST00000561276 RCAN3Q9UKA8 241 aa13.12□□□□□ -0.31
LRRC28-221ENST00000561276 ZNF652Q9Y2D9 606 aa13.12□□□□□ -0.31
LRRC28-221ENST00000561276 MAP3K2Q9Y2U5 619 aa13.12□□□□□ -0.31
LRRC28-221ENST00000561276 RGL2O15211 777 aa13.11□□□□□ -0.31
LRRC28-221ENST00000561276 TCIRG1Q13488 830 aa13.11□□□□□ -0.31
LRRC28-221ENST00000561276 TBC1D9BQ66K14 1250 aa13.11□□□□□ -0.31
LRRC28-221ENST00000561276 BICDL1Q6ZP65 573 aa13.11□□□□□ -0.31
LRRC28-221ENST00000561276 NOB1Q9ULX3 412 aaKnown RBP13.11□□□□□ -0.31
LRRC28-221ENST00000561276 NFIXQ14938 502 aa13.1□□□□□ -0.31
LRRC28-221ENST00000561276 ZNF34Q8IZ26 560 aa13.1□□□□□ -0.31
LRRC28-221ENST00000561276 FRAT1Q92837 279 aaPredicted RBP13.1□□□□□ -0.31
LRRC28-221ENST00000561276 SETDB2Q96T68 719 aa13.1□□□□□ -0.31
LRRC28-221ENST00000561276 SPON1Q9HCB6 807 aa13.1□□□□□ -0.31
LRRC28-221ENST00000561276 AFDNP55196 1824 aaKnown RBP13.1□□□□□ -0.31
LRRC28-221ENST00000561276 PTPRCP08575 1304 aa13.1□□□□□ -0.31
LRRC28-221ENST00000561276 ADCY9O60503 1353 aa13.09□□□□□ -0.31
LRRC28-221ENST00000561276 F6X3S4 739 aa13.09□□□□□ -0.31
LRRC28-221ENST00000561276 MMP10P09238 476 aa13.09□□□□□ -0.31
LRRC28-221ENST00000561276 HSP90AB3PQ58FF7 597 aa13.09□□□□□ -0.31
LRRC28-221ENST00000561276 METTL22Q9BUU2 404 aaPredicted RBP13.09□□□□□ -0.31
LRRC28-221ENST00000561276 NIP7Q9Y221 180 aaKnown RBP eCLIP13.09□□□□□ -0.31
LRRC28-221ENST00000561276 ATP5J2-PTCD1G3V325 749 aa13.08□□□□□ -0.32
LRRC28-221ENST00000561276 IPO8O15397 1037 aaKnown RBP13.08□□□□□ -0.32
LRRC28-221ENST00000561276 GPTP24298 496 aa13.08□□□□□ -0.32
LRRC28-221ENST00000561276 DNAAF4Q8WXU2 420 aa13.08□□□□□ -0.32
LRRC28-221ENST00000561276 ARHGAP45Q92619 1136 aa13.08□□□□□ -0.32
LRRC28-221ENST00000561276 MYD88Q99836 296 aa13.08□□□□□ -0.32
LRRC28-221ENST00000561276 PARP3Q9Y6F1 533 aa13.08□□□□□ -0.32
LRRC28-221ENST00000561276 FAM177BA6PVY3 158 aa13.07□□□□□ -0.32
LRRC28-221ENST00000561276 POLD1P28340 1107 aa13.07□□□□□ -0.32
LRRC28-221ENST00000561276 PTGER2P43116 358 aa13.07□□□□□ -0.32
LRRC28-221ENST00000561276 NEXNQ0ZGT2 675 aa13.07□□□□□ -0.32
LRRC28-221ENST00000561276 SLC4A10Q6U841 1118 aa13.07□□□□□ -0.32
LRRC28-221ENST00000561276 SGIP1Q9BQI5 828 aa13.07□□□□□ -0.32
LRRC28-221ENST00000561276 ISCA1Q9BUE6 129 aa13.07□□□□□ -0.32
LRRC28-221ENST00000561276 KIF16BQ96L93 1317 aa13.07□□□□□ -0.32
LRRC28-221ENST00000561276 ATP10DQ9P241 1426 aa13.06□□□□□ -0.32
LRRC28-221ENST00000561276 POLRMTO00411 1230 aaKnown RBP13.06□□□□□ -0.32
LRRC28-221ENST00000561276 SERPINB2P05120 415 aa13.06□□□□□ -0.32
LRRC28-221ENST00000561276 DDR1Q08345 913 aa13.06□□□□□ -0.32
LRRC28-221ENST00000561276 API5Q9BZZ5 524 aaKnown RBP13.06□□□□□ -0.32
LRRC28-221ENST00000561276 UBN2Q6ZU65 1347 aa13.06□□□□□ -0.32
LRRC28-221ENST00000561276 IGKV5-2P06315 115 aa13.05□□□□□ -0.32
LRRC28-221ENST00000561276 TRIM28Q13263 835 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms