RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 FAM184AQ8NB25 1140 aa16.83■□□□□ 0.28
RABGGTA-220ENST00000560998 DNAAF4Q8WXU2 420 aa16.83■□□□□ 0.28
RABGGTA-220ENST00000560998 DDX17Q92841 729 aaKnown RBP16.83■□□□□ 0.28
RABGGTA-220ENST00000560998 BEND3Q5T5X7 828 aa16.82■□□□□ 0.28
RABGGTA-220ENST00000560998 RBM42Q9BTD8 480 aaKnown RBP16.82■□□□□ 0.28
RABGGTA-220ENST00000560998 USP26Q9BXU7 913 aa16.82■□□□□ 0.28
RABGGTA-220ENST00000560998 TSPY26PQ9H489 355 aa16.82■□□□□ 0.28
RABGGTA-220ENST00000560998 TMEM63CQ9P1W3 806 aa16.82■□□□□ 0.28
RABGGTA-220ENST00000560998 ADCY9O60503 1353 aa16.82■□□□□ 0.28
RABGGTA-220ENST00000560998 PI4KAP2A4QPH2 592 aa16.82■□□□□ 0.28
RABGGTA-220ENST00000560998 GIGYF1O75420 1035 aaPredicted RBP16.82■□□□□ 0.28
RABGGTA-220ENST00000560998 PHF14O94880 888 aa16.82■□□□□ 0.28
RABGGTA-220ENST00000560998 GTF2E1P29083 439 aaPredicted RBP16.82■□□□□ 0.28
RABGGTA-220ENST00000560998 PI4KAP1Q8N8J0 262 aa16.82■□□□□ 0.28
RABGGTA-220ENST00000560998 SSH3Q8TE77 659 aa16.82■□□□□ 0.28
RABGGTA-220ENST00000560998 SYCE3A1L190 88 aa16.81■□□□□ 0.28
RABGGTA-220ENST00000560998 ANXA1P04083 346 aa16.81■□□□□ 0.28
RABGGTA-220ENST00000560998 CBX1P83916 185 aa16.81■□□□□ 0.28
RABGGTA-220ENST00000560998 SPTLC3Q9NUV7 552 aa16.81■□□□□ 0.28
RABGGTA-220ENST00000560998 DBF4Q9UBU7 674 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-220ENST00000560998 SCN11AQ9UI33 1791 aa16.81■□□□□ 0.28
RABGGTA-220ENST00000560998 POLA2Q14181 598 aa16.8■□□□□ 0.28
RABGGTA-220ENST00000560998 KLHL34Q8N239 644 aa16.8■□□□□ 0.28
RABGGTA-220ENST00000560998 RBM27Q9P2N5 1060 aaKnown RBP16.8■□□□□ 0.28
RABGGTA-220ENST00000560998 ABCC6O95255 1503 aa16.8■□□□□ 0.28
RABGGTA-220ENST00000560998 ST18O60284 1047 aa16.8■□□□□ 0.28
RABGGTA-220ENST00000560998 NOLC1Q14978 699 aaKnown RBP eCLIP16.8■□□□□ 0.28
RABGGTA-220ENST00000560998 CADPS2Q86UW7 1296 aa16.8■□□□□ 0.28
RABGGTA-220ENST00000560998 NPHP3Q7Z494 1330 aa16.8■□□□□ 0.28
RABGGTA-220ENST00000560998 TNS3Q68CZ2 1445 aa16.8■□□□□ 0.28
RABGGTA-220ENST00000560998 AK9Q5TCS8 1911 aa16.8■□□□□ 0.28
RABGGTA-220ENST00000560998 MX1P20591 662 aa16.79■□□□□ 0.28
RABGGTA-220ENST00000560998 PPP1R42Q7Z4L9 355 aa16.79■□□□□ 0.28
RABGGTA-220ENST00000560998 RAPGEF4Q8WZA2 1011 aa16.79■□□□□ 0.28
RABGGTA-220ENST00000560998 FEZ1Q99689 392 aa16.79■□□□□ 0.28
RABGGTA-220ENST00000560998 NLRP2Q9NX02 1062 aa16.79■□□□□ 0.28
RABGGTA-220ENST00000560998 STAP2Q9UGK3 403 aa16.79■□□□□ 0.28
RABGGTA-220ENST00000560998 DIAPH3Q9NSV4 1193 aa16.78■□□□□ 0.28
RABGGTA-220ENST00000560998 NBPF7P0C2Y1 421 aaPredicted RBP16.78■□□□□ 0.28
RABGGTA-220ENST00000560998 ATP2B3Q16720 1220 aa16.78■□□□□ 0.28
RABGGTA-220ENST00000560998 PROSER3Q2NL68 480 aa16.78■□□□□ 0.28
RABGGTA-220ENST00000560998 TSHZ3Q63HK5 1081 aa16.78■□□□□ 0.28
RABGGTA-220ENST00000560998 PDCL2Q8N4E4 241 aa16.78■□□□□ 0.28
RABGGTA-220ENST00000560998 KDM6AO15550 1401 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-220ENST00000560998 ERC2O15083 957 aa16.77■□□□□ 0.28
RABGGTA-220ENST00000560998 RAB11FIP3O75154 756 aa16.77■□□□□ 0.28
RABGGTA-220ENST00000560998 REC8O95072 547 aa16.77■□□□□ 0.28
RABGGTA-220ENST00000560998 TATP17735 454 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-220ENST00000560998 MEGF6O75095 1541 aa16.77■□□□□ 0.28
RABGGTA-220ENST00000560998 XIRP1Q702N8 1843 aaKnown RBP16.77■□□□□ 0.27
RABGGTA-220ENST00000560998 AOX1Q06278 1338 aa16.77■□□□□ 0.27
RABGGTA-220ENST00000560998 PRAMEF22A3QJZ6 481 aa16.77■□□□□ 0.27
RABGGTA-220ENST00000560998 CABLES1Q8TDN4 633 aa16.77■□□□□ 0.27
RABGGTA-220ENST00000560998 ANKRD7Q92527 254 aa16.76■□□□□ 0.27
RABGGTA-220ENST00000560998 BCL2L12Q9HB09 334 aa16.76■□□□□ 0.27
RABGGTA-220ENST00000560998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.76■□□□□ 0.271e-7■□□□□ 10.6
RABGGTA-220ENST00000560998 SPG7Q9UQ90 795 aa16.76■□□□□ 0.27
RABGGTA-220ENST00000560998 SPATA31A3Q5VYP0 1347 aa16.75■□□□□ 0.27
RABGGTA-220ENST00000560998 SURF6O75683 361 aaKnown RBP16.75■□□□□ 0.27
RABGGTA-220ENST00000560998 ALDH1L1O75891 902 aa16.75■□□□□ 0.27
RABGGTA-220ENST00000560998 PHKG2P15735 406 aa16.75■□□□□ 0.27
RABGGTA-220ENST00000560998 CHAF1AQ13111 956 aaPredicted RBP16.75■□□□□ 0.27
RABGGTA-220ENST00000560998 KSR2Q6VAB6 950 aa16.75■□□□□ 0.27
RABGGTA-220ENST00000560998 HYPKQ9NX55 129 aa16.75■□□□□ 0.27
RABGGTA-220ENST00000560998 MAP3K2Q9Y2U5 619 aa16.75■□□□□ 0.27
RABGGTA-220ENST00000560998 PLEKHG2Q9H7P9 1386 aa16.75■□□□□ 0.27
RABGGTA-220ENST00000560998 C5P01031 1676 aa16.75■□□□□ 0.27
RABGGTA-220ENST00000560998 SRGAP3O43295 1099 aa16.75■□□□□ 0.27
RABGGTA-220ENST00000560998 TPM3P06753 285 aa16.75■□□□□ 0.27
RABGGTA-220ENST00000560998 HSPA2P54652 639 aa16.75■□□□□ 0.27
RABGGTA-220ENST00000560998 GABPB1Q06547 395 aaPredicted RBP16.75■□□□□ 0.27
RABGGTA-220ENST00000560998 SLC52A2Q9HAB3 445 aa16.75■□□□□ 0.27
RABGGTA-220ENST00000560998 ZDHHC9Q9Y397 364 aa16.75■□□□□ 0.27
RABGGTA-220ENST00000560998 PKP1Q13835 747 aa16.74■□□□□ 0.27
RABGGTA-220ENST00000560998 CPDO75976 1380 aa16.74■□□□□ 0.27
RABGGTA-220ENST00000560998 PKD1L3Q7Z443 1732 aa16.73■□□□□ 0.27
RABGGTA-220ENST00000560998 CSB-PGBD3P0DP91 1061 aa16.73■□□□□ 0.27
RABGGTA-220ENST00000560998 SYCP1Q15431 976 aa16.73■□□□□ 0.27
RABGGTA-220ENST00000560998 CHRNA2Q15822 529 aa16.73■□□□□ 0.27
RABGGTA-220ENST00000560998 ZNF790Q6PG37 636 aa16.73■□□□□ 0.27
RABGGTA-220ENST00000560998 IL1RAPL2Q9NP60 686 aa16.73■□□□□ 0.27
RABGGTA-220ENST00000560998 DDX21Q9NR30 783 aaKnown RBP eCLIP16.73■□□□□ 0.27
RABGGTA-220ENST00000560998 MTX1Q13505 466 aa16.73■□□□□ 0.27
RABGGTA-220ENST00000560998 RNF214Q8ND24 703 aa16.73■□□□□ 0.27
RABGGTA-220ENST00000560998 RHPN1Q8TCX5 695 aa16.73■□□□□ 0.27
RABGGTA-220ENST00000560998 ESYT1Q9BSJ8 1104 aa16.73■□□□□ 0.27
RABGGTA-220ENST00000560998 PDIA6Q15084 440 aa16.72■□□□□ 0.27
RABGGTA-220ENST00000560998 IFNL2Q8IZJ0 200 aa16.72■□□□□ 0.27
RABGGTA-220ENST00000560998 TMEM51Q9NW97 253 aa16.72■□□□□ 0.27
RABGGTA-220ENST00000560998 OGFRQ9NZT2 677 aa16.72■□□□□ 0.27
RABGGTA-220ENST00000560998 MRC1P22897 1456 aa16.72■□□□□ 0.27
RABGGTA-220ENST00000560998 CTIFO43310 598 aaKnown RBP16.71■□□□□ 0.27
RABGGTA-220ENST00000560998 CHMLP26374 656 aa16.71■□□□□ 0.27
RABGGTA-220ENST00000560998 MCM2P49736 904 aa16.71■□□□□ 0.27
RABGGTA-220ENST00000560998 SLC39A6Q13433 755 aa16.71■□□□□ 0.27
RABGGTA-220ENST00000560998 NUTM1Q86Y26 1132 aa16.71■□□□□ 0.27
RABGGTA-220ENST00000560998 IPO4Q8TEX9 1081 aaKnown RBP16.71■□□□□ 0.27
RABGGTA-220ENST00000560998 KIF1BPQ96EK5 621 aa16.71■□□□□ 0.27
RABGGTA-220ENST00000560998 TRIM6-TRIM34B2RNG4 842 aa16.71■□□□□ 0.27
RABGGTA-220ENST00000560998 HSP90AB4PQ58FF6 505 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms