RNA–Protein interactions for RNA: ENST00000560912.5

CRNDE-210, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-210ENST00000560912 PRKAR2BP31323 418 aa25.55■■□□□ 1.68
CRNDE-210ENST00000560912 DZIP3Q86Y13 1208 aaKnown RBP25.55■■□□□ 1.68
CRNDE-210ENST00000560912 TAOK3Q9H2K8 898 aa25.55■■□□□ 1.68
CRNDE-210ENST00000560912 ST5P78524 1137 aa25.54■■□□□ 1.68
CRNDE-210ENST00000560912 PRPF40BQ6NWY9 871 aaKnown RBP25.54■■□□□ 1.68
CRNDE-210ENST00000560912 CNKSR1Q969H4 720 aa25.54■■□□□ 1.68
CRNDE-210ENST00000560912 CNGB1Q14028 1251 aaPredicted RBP25.52■■□□□ 1.68
CRNDE-210ENST00000560912 NPM2Q86SE8 214 aaKnown RBP25.52■■□□□ 1.68
CRNDE-210ENST00000560912 MASTLQ96GX5 879 aa25.52■■□□□ 1.68
CRNDE-210ENST00000560912 USP16Q9Y5T5 823 aa25.52■■□□□ 1.68
CRNDE-210ENST00000560912 DLG5Q8TDM6 1919 aa25.52■■□□□ 1.68
CRNDE-210ENST00000560912 SOGA3Q5TF21 947 aa25.51■■□□□ 1.67
CRNDE-210ENST00000560912 PRAMEF22A3QJZ6 481 aa25.5■■□□□ 1.67
CRNDE-210ENST00000560912 HSPA1AP0DMV8 641 aaKnown RBP25.5■■□□□ 1.67
CRNDE-210ENST00000560912 HSPA1BP0DMV9 641 aaKnown RBP25.5■■□□□ 1.67
CRNDE-210ENST00000560912 PIP4K2AP48426 406 aaPredicted RBP25.5■■□□□ 1.67
CRNDE-210ENST00000560912 CLEC4GQ6UXB4 293 aa25.5■■□□□ 1.67
CRNDE-210ENST00000560912 KDM3BQ7LBC6 1761 aa25.5■■□□□ 1.67
CRNDE-210ENST00000560912 NPHP1O15259 732 aa25.49■■□□□ 1.67
CRNDE-210ENST00000560912 CFAP53Q96M91 514 aa25.49■■□□□ 1.67
CRNDE-210ENST00000560912 ADAMTSL1Q8N6G6 1762 aa25.49■■□□□ 1.67
CRNDE-210ENST00000560912 DDNO94850 711 aaPredicted RBP25.48■■□□□ 1.67
CRNDE-210ENST00000560912 C7orf43Q8WVR3 580 aa25.48■■□□□ 1.67
CRNDE-210ENST00000560912 NUP98P52948 1817 aa25.47■■□□□ 1.67
CRNDE-210ENST00000560912 RGL2O15211 777 aa25.47■■□□□ 1.67
CRNDE-210ENST00000560912 CHADLQ6NUI6 762 aa25.47■■□□□ 1.67
CRNDE-210ENST00000560912 TNS4Q8IZW8 715 aa25.47■■□□□ 1.67
CRNDE-210ENST00000560912 KLRG2A4D1S0 409 aaPredicted RBP25.46■■□□□ 1.67
CRNDE-210ENST00000560912 SNRPA1P09661 255 aaKnown RBP25.46■■□□□ 1.67
CRNDE-210ENST00000560912 POTEIP0CG38 1075 aa25.46■■□□□ 1.67
CRNDE-210ENST00000560912 POTEJP0CG39 1038 aa25.46■■□□□ 1.67
CRNDE-210ENST00000560912 NBPF5PQ86XG9 351 aaPredicted RBP25.46■■□□□ 1.67
CRNDE-210ENST00000560912 ZNF652Q9Y2D9 606 aa25.46■■□□□ 1.67
CRNDE-210ENST00000560912 MCM10Q7L590 875 aa25.45■■□□□ 1.66
CRNDE-210ENST00000560912 CREBZFQ9NS37 354 aa25.45■■□□□ 1.66
CRNDE-210ENST00000560912 NBPF26B4DH59 902 aa25.44■■□□□ 1.66
CRNDE-210ENST00000560912 CCDC93Q567U6 631 aa25.44■■□□□ 1.66
CRNDE-210ENST00000560912 NBPF10Q6P3W6 841 aaKnown RBP25.44■■□□□ 1.66
CRNDE-210ENST00000560912 NBPF15Q8N660 670 aa25.44■■□□□ 1.66
CRNDE-210ENST00000560912 L3MBTL3Q96JM7 780 aaPredicted RBP25.44■■□□□ 1.66
CRNDE-210ENST00000560912 NUDCQ9Y266 331 aa25.44■■□□□ 1.66
CRNDE-210ENST00000560912 NPR1P16066 1061 aa25.43■■□□□ 1.66
CRNDE-210ENST00000560912 RTF1Q92541 710 aaKnown RBP25.42■■□□□ 1.66
CRNDE-210ENST00000560912 SNED1Q8TER0 1413 aa25.41■■□□□ 1.66
CRNDE-210ENST00000560912 U2AF1L5P0DN76 240 aaPredicted RBP25.41■■□□□ 1.66
CRNDE-210ENST00000560912 U2AF1Q01081 240 aaKnown RBP eCLIP25.41■■□□□ 1.66
CRNDE-210ENST00000560912 PASKQ96RG2 1323 aa25.4■■□□□ 1.66
CRNDE-210ENST00000560912 IQCA1LA6NCM1 817 aa25.4■■□□□ 1.66
CRNDE-210ENST00000560912 HTATSF1O43719 755 aaKnown RBP25.4■■□□□ 1.66
CRNDE-210ENST00000560912 PPP2R1AP30153 589 aa25.4■■□□□ 1.66
CRNDE-210ENST00000560912 FKBP4Q02790 459 aaKnown RBP eCLIP25.4■■□□□ 1.66
CRNDE-210ENST00000560912 NIP7Q9Y221 180 aaKnown RBP eCLIP25.4■■□□□ 1.66
CRNDE-210ENST00000560912 DCTN1Q14203 1278 aa25.39■■□□□ 1.66
CRNDE-210ENST00000560912 TPTE2Q6XPS3 522 aa25.39■■□□□ 1.66
CRNDE-210ENST00000560912 LDHDQ86WU2 507 aa25.39■■□□□ 1.66
CRNDE-210ENST00000560912 TAF1DQ9H5J8 278 aaPredicted RBP25.39■■□□□ 1.66
CRNDE-210ENST00000560912 ZNF541Q9H0D2 1346 aa25.38■■□□□ 1.65
CRNDE-210ENST00000560912 CAPN15O75808 1086 aa25.38■■□□□ 1.65
CRNDE-210ENST00000560912 CNTNAP1P78357 1384 aa25.38■■□□□ 1.65
CRNDE-210ENST00000560912 MKRN1Q9UHC7 482 aaKnown RBP25.37■■□□□ 1.65
CRNDE-210ENST00000560912 OLFM4Q6UX06 510 aa25.36■■□□□ 1.65
CRNDE-210ENST00000560912 ZNF277Q9NRM2 450 aaPredicted RBP25.36■■□□□ 1.65
CRNDE-210ENST00000560912 ABCC12Q96J65 1359 aa25.35■■□□□ 1.65
CRNDE-210ENST00000560912 HLFQ16534 295 aa25.35■■□□□ 1.65
CRNDE-210ENST00000560912 RTKN2Q8IZC4 609 aa25.34■■□□□ 1.65
CRNDE-210ENST00000560912 RIC1Q4ADV7 1423 aa25.34■■□□□ 1.65
CRNDE-210ENST00000560912 COL4A5P29400 1685 aa25.33■■□□□ 1.65
CRNDE-210ENST00000560912 LTBP1Q14766 1721 aa25.33■■□□□ 1.65
CRNDE-210ENST00000560912 TAF7Q15545 349 aaPredicted RBP25.33■■□□□ 1.65
CRNDE-210ENST00000560912 FAM177BA6PVY3 158 aa25.32■■□□□ 1.64
CRNDE-210ENST00000560912 ITGBL1O95965 494 aaPredicted RBP25.32■■□□□ 1.64
CRNDE-210ENST00000560912 CRY2Q49AN0 593 aa25.32■■□□□ 1.64
CRNDE-210ENST00000560912 IBTKQ9P2D0 1353 aaPredicted RBP25.31■■□□□ 1.64
CRNDE-210ENST00000560912 FZD9O00144 591 aa25.31■■□□□ 1.64
CRNDE-210ENST00000560912 ALDH1B1P30837 517 aa25.31■■□□□ 1.64
CRNDE-210ENST00000560912 IARSP41252 1262 aaKnown RBP25.31■■□□□ 1.64
CRNDE-210ENST00000560912 HACL1Q9UJ83 578 aa25.31■■□□□ 1.64
CRNDE-210ENST00000560912 PSMD1Q99460 953 aa25.29■■□□□ 1.64
CRNDE-210ENST00000560912 MIS18AQ9NYP9 233 aa25.29■■□□□ 1.64
CRNDE-210ENST00000560912 ERVV-1B6SEH8 477 aa25.28■■□□□ 1.64
CRNDE-210ENST00000560912 EPHX2P34913 555 aa25.28■■□□□ 1.64
CRNDE-210ENST00000560912 EAPPQ56P03 285 aaPredicted RBP25.28■■□□□ 1.64
CRNDE-210ENST00000560912 SYNE4Q8N205 404 aa25.28■■□□□ 1.64
CRNDE-210ENST00000560912 NYXQ9GZU5 481 aa25.28■■□□□ 1.64
CRNDE-210ENST00000560912 RNF123Q5XPI4 1314 aa25.28■■□□□ 1.64
CRNDE-210ENST00000560912 MAP3K15Q6ZN16 1313 aa25.28■■□□□ 1.64
CRNDE-210ENST00000560912 THSD7BQ9C0I4 1608 aa25.27■■□□□ 1.64
CRNDE-210ENST00000560912 ANKRD36CQ5JPF3 1778 aa25.27■■□□□ 1.64
CRNDE-210ENST00000560912 TMEM88BA6NKF7 163 aa25.27■■□□□ 1.64
CRNDE-210ENST00000560912 FOXN1O15353 648 aa25.27■■□□□ 1.64
CRNDE-210ENST00000560912 TRPM7Q96QT4 1865 aa25.27■■□□□ 1.64
CRNDE-210ENST00000560912 GTF2E1P29083 439 aaPredicted RBP25.26■■□□□ 1.63
CRNDE-210ENST00000560912 NUTM1Q86Y26 1132 aa25.26■■□□□ 1.63
CRNDE-210ENST00000560912 GPC2Q8N158 579 aa25.26■■□□□ 1.63
CRNDE-210ENST00000560912 PNISRQ8TF01 805 aaKnown RBP25.26■■□□□ 1.63
CRNDE-210ENST00000560912 LAMB2P55268 1798 aa25.26■■□□□ 1.63
CRNDE-210ENST00000560912 PNMA8AQ86V59 439 aaPredicted RBP25.25■■□□□ 1.63
CRNDE-210ENST00000560912 UBN2Q6ZU65 1347 aa25.25■■□□□ 1.63
CRNDE-210ENST00000560912 VEGFBP49765 207 aa25.24■■□□□ 1.63
CRNDE-210ENST00000560912 EIF4A1P60842 406 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms