RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 ITPK1Q13572 414 aa14.25□□□□□ -0.13
SNX1-212ENST00000560861 FAM182BQ5T319 152 aa14.25□□□□□ -0.13
SNX1-212ENST00000560861 SIRT2Q8IXJ6 389 aa14.25□□□□□ -0.13
SNX1-212ENST00000560861 RNF216Q9NWF9 866 aaPredicted RBP14.25□□□□□ -0.13
SNX1-212ENST00000560861 STARD3NLO95772 234 aa14.24□□□□□ -0.13
SNX1-212ENST00000560861 SRCIN1Q9C0H9 1055 aa14.24□□□□□ -0.13
SNX1-212ENST00000560861 USP44Q9H0E7 712 aa14.24□□□□□ -0.13
SNX1-212ENST00000560861 C1orf115Q9H7X2 142 aa14.24□□□□□ -0.13
SNX1-212ENST00000560861 IGKV5-2P06315 115 aa14.23□□□□□ -0.13
SNX1-212ENST00000560861 AIMP1Q12904 312 aaKnown RBP14.23□□□□□ -0.13
SNX1-212ENST00000560861 INTS5Q6P9B9 1019 aaKnown RBP14.23□□□□□ -0.13
SNX1-212ENST00000560861 TTLL7Q6ZT98 887 aa14.23□□□□□ -0.13
SNX1-212ENST00000560861 KRT27Q7Z3Y8 459 aa14.23□□□□□ -0.13
SNX1-212ENST00000560861 LINS1Q8NG48 757 aa14.23□□□□□ -0.13
SNX1-212ENST00000560861 PLBD2Q8NHP8 589 aa14.23□□□□□ -0.13
SNX1-212ENST00000560861 METTL22Q9BUU2 404 aaPredicted RBP14.23□□□□□ -0.13
SNX1-212ENST00000560861 ANKRD36CQ5JPF3 1778 aa14.23□□□□□ -0.13
SNX1-212ENST00000560861 UTYO14607 1347 aa14.22□□□□□ -0.13
SNX1-212ENST00000560861 ANKRD13DQ6ZTN6 518 aa14.22□□□□□ -0.13
SNX1-212ENST00000560861 RWDD1Q9H446 243 aaPredicted RBP14.22□□□□□ -0.13
SNX1-212ENST00000560861 ZBTB1Q9Y2K1 713 aa14.22□□□□□ -0.13
SNX1-212ENST00000560861 NUP98P52948 1817 aa14.21□□□□□ -0.13
SNX1-212ENST00000560861 ATP6V1AP38606 617 aa14.21□□□□□ -0.13
SNX1-212ENST00000560861 CEP85Q6P2H3 762 aa14.21□□□□□ -0.13
SNX1-212ENST00000560861 FAM196AQ6ZSG2 479 aa14.21□□□□□ -0.13
SNX1-212ENST00000560861 RIC3Q7Z5B4 369 aa14.21□□□□□ -0.13
SNX1-212ENST00000560861 SMC5Q8IY18 1101 aa14.21□□□□□ -0.13
SNX1-212ENST00000560861 ANKRD44Q8N8A2 993 aa14.21□□□□□ -0.13
SNX1-212ENST00000560861 BCL11BQ9C0K0 894 aaPredicted RBP14.21□□□□□ -0.13
SNX1-212ENST00000560861 BCORQ6W2J9 1755 aa14.21□□□□□ -0.13
SNX1-212ENST00000560861 NEURL1BA8MQ27 555 aa14.2□□□□□ -0.14
SNX1-212ENST00000560861 GNAI3P08754 354 aa14.2□□□□□ -0.14
SNX1-212ENST00000560861 IL6STP40189 918 aaPredicted RBP14.2□□□□□ -0.14
SNX1-212ENST00000560861 EIF5P55010 431 aaKnown RBP14.2□□□□□ -0.14
SNX1-212ENST00000560861 RPAP2Q8IXW5 612 aaPredicted RBP14.2□□□□□ -0.14
SNX1-212ENST00000560861 CCDC87Q9NVE4 849 aa14.2□□□□□ -0.14
SNX1-212ENST00000560861 CNTNAP4Q9C0A0 1308 aa14.19□□□□□ -0.14
SNX1-212ENST00000560861 TNS1Q9HBL0 1735 aaKnown RBP14.19□□□□□ -0.14
SNX1-212ENST00000560861 GNAI2P04899 355 aa14.19□□□□□ -0.14
SNX1-212ENST00000560861 CRKLP46109 303 aaKnown RBP14.19□□□□□ -0.14
SNX1-212ENST00000560861 CWF19L2Q2TBE0 894 aaKnown RBP14.19□□□□□ -0.14
SNX1-212ENST00000560861 LINC00116Q8NCU8 138 aa14.19□□□□□ -0.14
SNX1-212ENST00000560861 SRCAPQ6ZRS2 3230 aa14.18□□□□□ -0.14
SNX1-212ENST00000560861 NBPF7P0C2Y1 421 aaPredicted RBP14.18□□□□□ -0.14
SNX1-212ENST00000560861 MYD88Q99836 296 aa14.18□□□□□ -0.14
SNX1-212ENST00000560861 COL15A1P39059 1388 aa14.18□□□□□ -0.14
SNX1-212ENST00000560861 MAP3K15Q6ZN16 1313 aa14.17□□□□□ -0.14
SNX1-212ENST00000560861 SCN7AQ01118 1682 aa14.17□□□□□ -0.14
SNX1-212ENST00000560861 UBTFL1P0CB47 393 aaPredicted RBP14.17□□□□□ -0.14
SNX1-212ENST00000560861 GCKRQ14397 625 aa14.17□□□□□ -0.14
SNX1-212ENST00000560861 ISCA1Q9BUE6 129 aa14.17□□□□□ -0.14
SNX1-212ENST00000560861 LRRFIP2Q9Y608 721 aaKnown RBP14.17□□□□□ -0.14
SNX1-212ENST00000560861 C4BP0C0L5 1744 aa14.17□□□□□ -0.14
SNX1-212ENST00000560861 GRM8O00222 908 aa14.16□□□□□ -0.14
SNX1-212ENST00000560861 CASP7P55210 303 aa14.16□□□□□ -0.14
SNX1-212ENST00000560861 ATP8B2P98198 1209 aa14.16□□□□□ -0.14
SNX1-212ENST00000560861 NEXNQ0ZGT2 675 aa14.16□□□□□ -0.14
SNX1-212ENST00000560861 TRIM28Q13263 835 aaKnown RBP14.16□□□□□ -0.14
SNX1-212ENST00000560861 MTX1Q13505 466 aa14.16□□□□□ -0.14
SNX1-212ENST00000560861 RC3H1Q5TC82 1133 aaKnown RBP14.16□□□□□ -0.14
SNX1-212ENST00000560861 SKAP1Q86WV1 359 aa14.16□□□□□ -0.14
SNX1-212ENST00000560861 KAZALD1Q96I82 304 aa14.16□□□□□ -0.14
SNX1-212ENST00000560861 ZBTB3Q9H5J0 574 aa14.16□□□□□ -0.14
SNX1-212ENST00000560861 RGPD3A6NKT7 1758 aaPredicted RBP14.16□□□□□ -0.14
SNX1-212ENST00000560861 RGPD4Q7Z3J3 1758 aa14.16□□□□□ -0.14
SNX1-212ENST00000560861 TCIRG1Q13488 830 aa14.15□□□□□ -0.14
SNX1-212ENST00000560861 POLA2Q14181 598 aa14.15□□□□□ -0.14
SNX1-212ENST00000560861 GIGYF2Q6Y7W6 1299 aaKnown RBP14.15□□□□□ -0.14
SNX1-212ENST00000560861 DCTPP1Q9H773 170 aa14.15□□□□□ -0.14
SNX1-212ENST00000560861 PDZRN3Q9UPQ7 1066 aa14.15□□□□□ -0.14
SNX1-212ENST00000560861 UBR3Q6ZT12 1888 aa14.14□□□□□ -0.15
SNX1-212ENST00000560861 ERVV-1B6SEH8 477 aa14.14□□□□□ -0.15
SNX1-212ENST00000560861 KIF6Q6ZMV9 814 aa14.14□□□□□ -0.15
SNX1-212ENST00000560861 GCC1Q96CN9 775 aa14.14□□□□□ -0.15
SNX1-212ENST00000560861 CCNL1Q9UK58 526 aaPredicted RBP14.14□□□□□ -0.15
SNX1-212ENST00000560861 C4AP0C0L4 1744 aa14.14□□□□□ -0.15
SNX1-212ENST00000560861 PNMA6EA0A0J9YXQ4 647 aa14.13□□□□□ -0.15
SNX1-212ENST00000560861 ATP5J2-PTCD1G3V325 749 aa14.13□□□□□ -0.15
SNX1-212ENST00000560861 H7C1W4 665 aa14.13□□□□□ -0.15
SNX1-212ENST00000560861 KCNQ4P56696 695 aa14.13□□□□□ -0.15
SNX1-212ENST00000560861 HLFQ16534 295 aa14.13□□□□□ -0.15
SNX1-212ENST00000560861 CCDC191Q8NCU4 936 aa14.13□□□□□ -0.15
SNX1-212ENST00000560861 SSH3Q8TE77 659 aa14.13□□□□□ -0.15
SNX1-212ENST00000560861 SUCLG2Q96I99 432 aa14.13□□□□□ -0.15
SNX1-212ENST00000560861 RGL2O15211 777 aa14.12□□□□□ -0.15
SNX1-212ENST00000560861 TRIM37O94972 964 aa14.12□□□□□ -0.15
SNX1-212ENST00000560861 CAMTA2O94983 1202 aa14.12□□□□□ -0.15
SNX1-212ENST00000560861 DZIP3Q86Y13 1208 aaKnown RBP14.12□□□□□ -0.15
SNX1-212ENST00000560861 LRRC4BQ9NT99 713 aa14.12□□□□□ -0.15
SNX1-212ENST00000560861 C9orf78Q9NZ63 289 aaPredicted RBP14.12□□□□□ -0.15
SNX1-212ENST00000560861 HMMRO75330 724 aa14.11□□□□□ -0.15
SNX1-212ENST00000560861 RPS6KA4O75676 772 aa14.11□□□□□ -0.15
SNX1-212ENST00000560861 NUCB1Q02818 461 aa14.11□□□□□ -0.15
SNX1-212ENST00000560861 EPHA10Q5JZY3 1008 aa14.11□□□□□ -0.15
SNX1-212ENST00000560861 PPP1R42Q7Z4L9 355 aa14.11□□□□□ -0.15
SNX1-212ENST00000560861 CWC25Q9NXE8 425 aaPredicted RBP14.11□□□□□ -0.15
SNX1-212ENST00000560861 TBC1D2BQ9UPU7 963 aa14.11□□□□□ -0.15
SNX1-212ENST00000560861 ZNF330Q9Y3S2 320 aaPredicted RBP14.11□□□□□ -0.15
SNX1-212ENST00000560861 COL24A1Q17RW2 1714 aa14.1□□□□□ -0.15
SNX1-212ENST00000560861 LAMB2P55268 1798 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms