RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 KRTAP4-12Q9BQ66 201 aa9.2□□□□□ -0.94
PSMA4-221ENST00000560842 ALG2Q9H553 416 aa9.2□□□□□ -0.94
PSMA4-221ENST00000560842 SERTAD1Q9UHV2 236 aa9.2□□□□□ -0.94
PSMA4-221ENST00000560842 A6NJY4 79 aa9.19□□□□□ -0.94
PSMA4-221ENST00000560842 ADARB2-AS1A8MUL3 147 aa9.19□□□□□ -0.94
PSMA4-221ENST00000560842 TMEM229AB2RXF0 380 aa9.19□□□□□ -0.94
PSMA4-221ENST00000560842 PRDM6Q9NQX0 595 aa9.19□□□□□ -0.94
PSMA4-221ENST00000560842 CABP1Q9NZU7 370 aa9.19□□□□□ -0.94
PSMA4-221ENST00000560842 USP3Q9Y6I4 520 aa9.19□□□□□ -0.94
PSMA4-221ENST00000560842 SIN3BO75182 1162 aa9.18□□□□□ -0.94
PSMA4-221ENST00000560842 C14orf37Q86TY3 774 aa9.18□□□□□ -0.94
PSMA4-221ENST00000560842 PRSS36Q5K4E3 855 aa9.17□□□□□ -0.94
PSMA4-221ENST00000560842 LCE3BQ5TA77 95 aa9.17□□□□□ -0.94
PSMA4-221ENST00000560842 BICDL1Q6ZP65 573 aa9.17□□□□□ -0.94
PSMA4-221ENST00000560842 NACC1Q96RE7 527 aa9.17□□□□□ -0.94
PSMA4-221ENST00000560842 POM121CA8CG34 1229 aa9.16□□□□□ -0.94
PSMA4-221ENST00000560842 M0R082 166 aa9.16□□□□□ -0.94
PSMA4-221ENST00000560842 TRIM28Q13263 835 aaKnown RBP9.16□□□□□ -0.94
PSMA4-221ENST00000560842 ZNF417Q8TAU3 575 aa9.16□□□□□ -0.94
PSMA4-221ENST00000560842 ZNF587Q96SQ5 575 aaPredicted RBP9.16□□□□□ -0.94
PSMA4-221ENST00000560842 FAM229AH3BQW9 127 aa9.15□□□□□ -0.94
PSMA4-221ENST00000560842 PLPP7Q8NBV4 271 aa9.15□□□□□ -0.94
PSMA4-221ENST00000560842 ADAMTS19Q8TE59 1207 aa9.15□□□□□ -0.94
PSMA4-221ENST00000560842 TNFRSF25Q93038 417 aa9.15□□□□□ -0.94
PSMA4-221ENST00000560842 TIMELESSQ9UNS1 1208 aa9.15□□□□□ -0.94
PSMA4-221ENST00000560842 STARD13Q9Y3M8 1113 aa9.15□□□□□ -0.94
PSMA4-221ENST00000560842 TXLNAP40222 546 aa9.14□□□□□ -0.95
PSMA4-221ENST00000560842 NBPF11Q86T75 865 aa9.14□□□□□ -0.95
PSMA4-221ENST00000560842 MICALL1Q8N3F8 863 aa9.14□□□□□ -0.95
PSMA4-221ENST00000560842 PARP3Q9Y6F1 533 aa9.14□□□□□ -0.95
PSMA4-221ENST00000560842 GRIK4Q16099 956 aa9.13□□□□□ -0.95
PSMA4-221ENST00000560842 NID1P14543 1247 aa9.12□□□□□ -0.95
PSMA4-221ENST00000560842 SEMA3FQ13275 785 aa9.12□□□□□ -0.95
PSMA4-221ENST00000560842 PCDHGA11Q9Y5H2 935 aa9.12□□□□□ -0.95
PSMA4-221ENST00000560842 ALBP02768 609 aa9.11□□□□□ -0.95
PSMA4-221ENST00000560842 H2AFB1P0C5Y9 115 aa9.11□□□□□ -0.95
PSMA4-221ENST00000560842 H2AFB2P0C5Z0 115 aa9.11□□□□□ -0.95
PSMA4-221ENST00000560842 HDGFL1Q5TGJ6 251 aa9.11□□□□□ -0.95
PSMA4-221ENST00000560842 C8orf86Q6ZUL3 223 aa9.11□□□□□ -0.95
PSMA4-221ENST00000560842 C9orf172C9J069 976 aa9.1□□□□□ -0.95
PSMA4-221ENST00000560842 EML1O00423 815 aa9.1□□□□□ -0.95
PSMA4-221ENST00000560842 BACH1O14867 736 aa9.1□□□□□ -0.95
PSMA4-221ENST00000560842 SFSWAPQ12872 951 aaKnown RBP9.1□□□□□ -0.95
PSMA4-221ENST00000560842 LRRC69Q6ZNQ3 347 aa9.1□□□□□ -0.95
PSMA4-221ENST00000560842 ZDHHC1Q8WTX9 485 aa9.1□□□□□ -0.95
PSMA4-221ENST00000560842 C7orf43Q8WVR3 580 aa9.1□□□□□ -0.95
PSMA4-221ENST00000560842 SLC30A3Q99726 388 aa9.1□□□□□ -0.95
PSMA4-221ENST00000560842 TEAD4Q15561 434 aa9.09□□□□□ -0.95
PSMA4-221ENST00000560842 C20orf204Q6ZNR8 217 aa9.09□□□□□ -0.95
PSMA4-221ENST00000560842 NFATC2IPQ8NCF5 419 aa9.09□□□□□ -0.95
PSMA4-221ENST00000560842 GLMNQ92990 594 aa9.09□□□□□ -0.95
PSMA4-221ENST00000560842 L3MBTL2Q969R5 705 aa9.09□□□□□ -0.95
PSMA4-221ENST00000560842 SCHIP1Q9P0W5 487 aaPredicted RBP9.09□□□□□ -0.95
PSMA4-221ENST00000560842 GPC6Q9Y625 555 aaPredicted RBP9.09□□□□□ -0.95
PSMA4-221ENST00000560842 NOS2P35228 1153 aa9.08□□□□□ -0.96
PSMA4-221ENST00000560842 LRP8Q14114 963 aa9.08□□□□□ -0.96
PSMA4-221ENST00000560842 ADGRE1Q14246 886 aa9.08□□□□□ -0.96
PSMA4-221ENST00000560842 ZNF777Q9ULD5 760 aaPredicted RBP9.08□□□□□ -0.96
PSMA4-221ENST00000560842 ADH7P40394 386 aa9.07□□□□□ -0.96
PSMA4-221ENST00000560842 UCN2Q96RP3 112 aa9.07□□□□□ -0.96
PSMA4-221ENST00000560842 NEUROD4Q9HD90 331 aa9.07□□□□□ -0.96
PSMA4-221ENST00000560842 HYAL3O43820 417 aaPredicted RBP9.05□□□□□ -0.96
PSMA4-221ENST00000560842 SELPP16109 830 aa9.05□□□□□ -0.96
PSMA4-221ENST00000560842 SPEM2Q0P670 501 aa9.05□□□□□ -0.96
PSMA4-221ENST00000560842 NEUROD1Q13562 356 aa9.05□□□□□ -0.96
PSMA4-221ENST00000560842 MBTPS1Q14703 1052 aa9.05□□□□□ -0.96
PSMA4-221ENST00000560842 TRAPPC3LQ5T215 181 aa9.05□□□□□ -0.96
PSMA4-221ENST00000560842 ELNP15502 786 aa9.04□□□□□ -0.96
PSMA4-221ENST00000560842 TXNRD3Q86VQ6 643 aa9.04□□□□□ -0.96
PSMA4-221ENST00000560842 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.04□□□□□ -0.96
PSMA4-221ENST00000560842 LENG1Q96BZ8 264 aaPredicted RBP9.04□□□□□ -0.96
PSMA4-221ENST00000560842 CALR3Q96L12 384 aaKnown RBP9.04□□□□□ -0.96
PSMA4-221ENST00000560842 PIK3CDO00329 1044 aa9.03□□□□□ -0.96
PSMA4-221ENST00000560842 LILRB5O75023 590 aa9.03□□□□□ -0.96
PSMA4-221ENST00000560842 EPHA4P54764 986 aa9.03□□□□□ -0.96
PSMA4-221ENST00000560842 KCNQ4P56696 695 aa9.03□□□□□ -0.96
PSMA4-221ENST00000560842 ZNF358Q9NW07 568 aa9.03□□□□□ -0.96
PSMA4-221ENST00000560842 A0A0A0MRY4 1105 aa9.02□□□□□ -0.97
PSMA4-221ENST00000560842 LZTS3O60299 673 aaPredicted RBP9.02□□□□□ -0.97
PSMA4-221ENST00000560842 NRG1Q02297 640 aaPredicted RBP9.02□□□□□ -0.97
PSMA4-221ENST00000560842 EML3Q32P44 896 aa9.02□□□□□ -0.97
PSMA4-221ENST00000560842 ZNF232Q9UNY5 417 aa9.02□□□□□ -0.97
PSMA4-221ENST00000560842 RAB44Q7Z6P3 723 aaPredicted RBP9.01□□□□□ -0.97
PSMA4-221ENST00000560842 SLC9A9Q8IVB4 645 aa9.01□□□□□ -0.97
PSMA4-221ENST00000560842 KRTAP9-9Q9BYP9 154 aa9.01□□□□□ -0.97
PSMA4-221ENST00000560842 KRTAP9-4Q9BYQ2 154 aa9.01□□□□□ -0.97
PSMA4-221ENST00000560842 C1orf115Q9H7X2 142 aa9.01□□□□□ -0.97
PSMA4-221ENST00000560842 NOD1Q9Y239 953 aa9.01□□□□□ -0.97
PSMA4-221ENST00000560842 SERTM1A2A2V5 107 aa9□□□□□ -0.97
PSMA4-221ENST00000560842 ATP9BO43861 1147 aa9□□□□□ -0.97
PSMA4-221ENST00000560842 GTF2IP78347 998 aa9□□□□□ -0.97
PSMA4-221ENST00000560842 KRTAP19-1Q8IUB9 90 aa9□□□□□ -0.97
PSMA4-221ENST00000560842 PLEKHM2Q8IWE5 1019 aa9□□□□□ -0.97
PSMA4-221ENST00000560842 RHPN1Q8TCX5 695 aa9□□□□□ -0.97
PSMA4-221ENST00000560842 PPP1R12CQ9BZL4 782 aa9□□□□□ -0.97
PSMA4-221ENST00000560842 BRD7Q9NPI1 651 aa9□□□□□ -0.97
PSMA4-221ENST00000560842 BTBD11A6QL63 1104 aa8.99□□□□□ -0.97
PSMA4-221ENST00000560842 TBCELQ5QJ74 424 aa8.99□□□□□ -0.97
PSMA4-221ENST00000560842 SH3PXD2AQ5TCZ1 1133 aa8.99□□□□□ -0.97
PSMA4-221ENST00000560842 C1orf53Q5VUE5 145 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms