RNA–Protein interactions for RNA: ENST00000560808.1

NEO1-211, Transcript of neogenin 1, humanhuman

TSL 3

Gene NEO1, Length 1,046 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-211ENST00000560808 NBPF10Q6P3W6 841 aaKnown RBP12.72□□□□□ -0.37
NEO1-211ENST00000560808 TPTE2Q6XPS3 522 aa12.72□□□□□ -0.37
NEO1-211ENST00000560808 NBPF15Q8N660 670 aa12.72□□□□□ -0.37
NEO1-211ENST00000560808 TAOK3Q9H2K8 898 aa12.72□□□□□ -0.37
NEO1-211ENST00000560808 ZNF652Q9Y2D9 606 aa12.72□□□□□ -0.37
NEO1-211ENST00000560808 JMYQ8N9B5 988 aa12.71□□□□□ -0.37
NEO1-211ENST00000560808 FAM177BA6PVY3 158 aa12.7□□□□□ -0.38
NEO1-211ENST00000560808 NEFMP07197 916 aa12.7□□□□□ -0.38
NEO1-211ENST00000560808 SOGA3Q5TF21 947 aa12.7□□□□□ -0.38
NEO1-211ENST00000560808 NIP7Q9Y221 180 aaKnown RBP eCLIP12.7□□□□□ -0.38
NEO1-211ENST00000560808 DDNO94850 711 aaPredicted RBP12.69□□□□□ -0.38
NEO1-211ENST00000560808 NPR1P16066 1061 aa12.69□□□□□ -0.38
NEO1-211ENST00000560808 GTF2E1P29083 439 aaPredicted RBP12.69□□□□□ -0.38
NEO1-211ENST00000560808 NGEFQ8N5V2 710 aa12.69□□□□□ -0.38
NEO1-211ENST00000560808 C7orf43Q8WVR3 580 aa12.69□□□□□ -0.38
NEO1-211ENST00000560808 BRCA1P38398 1863 aaKnown RBP12.69□□□□□ -0.38
NEO1-211ENST00000560808 ARFGEF1Q9Y6D6 1849 aa12.69□□□□□ -0.38
NEO1-211ENST00000560808 LTBP3Q9NS15 1303 aa12.68□□□□□ -0.38
NEO1-211ENST00000560808 KLRG2A4D1S0 409 aaPredicted RBP12.68□□□□□ -0.38
NEO1-211ENST00000560808 HLFQ16534 295 aa12.68□□□□□ -0.38
NEO1-211ENST00000560808 RGL2O15211 777 aa12.67□□□□□ -0.38
NEO1-211ENST00000560808 PNISRQ8TF01 805 aaKnown RBP12.67□□□□□ -0.38
NEO1-211ENST00000560808 RRP7AQ9Y3A4 280 aaKnown RBP12.67□□□□□ -0.38
NEO1-211ENST00000560808 NRXN2Q9P2S2 1712 aa12.66□□□□□ -0.38
NEO1-211ENST00000560808 ALDH1B1P30837 517 aa12.66□□□□□ -0.38
NEO1-211ENST00000560808 CCDC93Q567U6 631 aa12.66□□□□□ -0.38
NEO1-211ENST00000560808 COL13A1Q5TAT6 717 aaPredicted RBP12.66□□□□□ -0.38
NEO1-211ENST00000560808 CHADLQ6NUI6 762 aa12.65□□□□□ -0.38
NEO1-211ENST00000560808 OLFM4Q6UX06 510 aa12.65□□□□□ -0.38
NEO1-211ENST00000560808 RTKN2Q8IZC4 609 aa12.65□□□□□ -0.38
NEO1-211ENST00000560808 PLEKHF1Q96S99 279 aa12.65□□□□□ -0.38
NEO1-211ENST00000560808 THUMPD2Q9BTF0 503 aaKnown RBP12.65□□□□□ -0.38
NEO1-211ENST00000560808 PNNQ9H307 717 aaKnown RBP12.65□□□□□ -0.38
NEO1-211ENST00000560808 ZNF277Q9NRM2 450 aaPredicted RBP12.65□□□□□ -0.38
NEO1-211ENST00000560808 UBR2Q8IWV8 1755 aa12.65□□□□□ -0.38
NEO1-211ENST00000560808 AFDNP55196 1824 aaKnown RBP12.65□□□□□ -0.39
NEO1-211ENST00000560808 ERVV-1B6SEH8 477 aa12.64□□□□□ -0.39
NEO1-211ENST00000560808 MYL6BP14649 208 aa12.64□□□□□ -0.39
NEO1-211ENST00000560808 EIF4A1P60842 406 aaKnown RBP12.64□□□□□ -0.39
NEO1-211ENST00000560808 FKBP4Q02790 459 aaKnown RBP eCLIP12.64□□□□□ -0.39
NEO1-211ENST00000560808 NFE2L2Q16236 605 aa12.64□□□□□ -0.39
NEO1-211ENST00000560808 IQCA1LA6NCM1 817 aa12.63□□□□□ -0.39
NEO1-211ENST00000560808 POTEIP0CG38 1075 aa12.63□□□□□ -0.39
NEO1-211ENST00000560808 POTEJP0CG39 1038 aa12.63□□□□□ -0.39
NEO1-211ENST00000560808 KIF6Q6ZMV9 814 aa12.63□□□□□ -0.39
NEO1-211ENST00000560808 TTLL7Q6ZT98 887 aa12.63□□□□□ -0.39
NEO1-211ENST00000560808 NUTM1Q86Y26 1132 aa12.63□□□□□ -0.39
NEO1-211ENST00000560808 SYNE4Q8N205 404 aa12.63□□□□□ -0.39
NEO1-211ENST00000560808 NYXQ9GZU5 481 aa12.63□□□□□ -0.39
NEO1-211ENST00000560808 GPTP24298 496 aa12.62□□□□□ -0.39
NEO1-211ENST00000560808 TAF1DQ9H5J8 278 aaPredicted RBP12.62□□□□□ -0.39
NEO1-211ENST00000560808 MAP3K15Q6ZN16 1313 aa12.62□□□□□ -0.39
NEO1-211ENST00000560808 SBF1O95248 1867 aa12.61□□□□□ -0.39
NEO1-211ENST00000560808 LDHDQ86WU2 507 aa12.61□□□□□ -0.39
NEO1-211ENST00000560808 L3MBTL3Q96JM7 780 aaPredicted RBP12.61□□□□□ -0.39
NEO1-211ENST00000560808 ZBTB3Q9H5J0 574 aa12.61□□□□□ -0.39
NEO1-211ENST00000560808 CREBZFQ9NS37 354 aa12.61□□□□□ -0.39
NEO1-211ENST00000560808 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
NEO1-211ENST00000560808 MAPK8IP3Q9UPT6 1336 aa12.61□□□□□ -0.39
NEO1-211ENST00000560808 HSPA1AP0DMV8 641 aaKnown RBP12.6□□□□□ -0.39
NEO1-211ENST00000560808 HSPA1BP0DMV9 641 aaKnown RBP12.6□□□□□ -0.39
NEO1-211ENST00000560808 IARSP41252 1262 aaKnown RBP12.6□□□□□ -0.39
NEO1-211ENST00000560808 CRY2Q49AN0 593 aa12.6□□□□□ -0.39
NEO1-211ENST00000560808 EAPPQ56P03 285 aaPredicted RBP12.6□□□□□ -0.39
NEO1-211ENST00000560808 SUSD4Q5VX71 490 aa12.6□□□□□ -0.39
NEO1-211ENST00000560808 JDP2Q8WYK2 163 aa12.6□□□□□ -0.39
NEO1-211ENST00000560808 RPGRQ92834 1020 aaKnown RBP12.6□□□□□ -0.39
NEO1-211ENST00000560808 MKRN1Q9UHC7 482 aaKnown RBP12.6□□□□□ -0.39
NEO1-211ENST00000560808 HACL1Q9UJ83 578 aa12.6□□□□□ -0.39
NEO1-211ENST00000560808 ZNF541Q9H0D2 1346 aa12.6□□□□□ -0.39
NEO1-211ENST00000560808 FZD9O00144 591 aa12.59□□□□□ -0.39
NEO1-211ENST00000560808 EIF2S2P20042 333 aaKnown RBP12.59□□□□□ -0.39
NEO1-211ENST00000560808 HOXA10P31260 410 aaPredicted RBP12.59□□□□□ -0.39
NEO1-211ENST00000560808 RIPK4P57078 832 aa12.59□□□□□ -0.39
NEO1-211ENST00000560808 CC2D2BQ6DHV5 1058 aa12.59□□□□□ -0.39
NEO1-211ENST00000560808 ZNF34Q8IZ26 560 aa12.59□□□□□ -0.39
NEO1-211ENST00000560808 TNS4Q8IZW8 715 aa12.59□□□□□ -0.39
NEO1-211ENST00000560808 TSPYL4Q9UJ04 414 aa12.59□□□□□ -0.39
NEO1-211ENST00000560808 TNRC6CQ9HCJ0 1690 aaKnown RBP12.58□□□□□ -0.4
NEO1-211ENST00000560808 TCERG1O14776 1098 aaKnown RBP12.58□□□□□ -0.4
NEO1-211ENST00000560808 ITGBL1O95965 494 aaPredicted RBP12.58□□□□□ -0.4
NEO1-211ENST00000560808 EPHX2P34913 555 aa12.58□□□□□ -0.4
NEO1-211ENST00000560808 RBM17Q96I25 401 aaKnown RBP12.58□□□□□ -0.4
NEO1-211ENST00000560808 WDR90Q96KV7 1748 aa12.58□□□□□ -0.4
NEO1-211ENST00000560808 PSMD1Q99460 953 aa12.58□□□□□ -0.4
NEO1-211ENST00000560808 SIPA1L3O60292 1781 aaPredicted RBP12.58□□□□□ -0.4
NEO1-211ENST00000560808 SLX4Q8IY92 1834 aa12.58□□□□□ -0.4
NEO1-211ENST00000560808 SCN7AQ01118 1682 aa12.57□□□□□ -0.4
NEO1-211ENST00000560808 ANKRD31Q8N7Z5 1873 aa12.57□□□□□ -0.4
NEO1-211ENST00000560808 DLEC1Q9Y238 1755 aa12.57□□□□□ -0.4
NEO1-211ENST00000560808 CAPN15O75808 1086 aa12.57□□□□□ -0.4
NEO1-211ENST00000560808 GRIPAP1Q4V328 841 aa12.57□□□□□ -0.4
NEO1-211ENST00000560808 GIGYF2Q6Y7W6 1299 aaKnown RBP12.57□□□□□ -0.4
NEO1-211ENST00000560808 PPP1R42Q7Z4L9 355 aa12.57□□□□□ -0.4
NEO1-211ENST00000560808 PNMA8AQ86V59 439 aaPredicted RBP12.57□□□□□ -0.4
NEO1-211ENST00000560808 GPC2Q8N158 579 aa12.57□□□□□ -0.4
NEO1-211ENST00000560808 CRAMP1Q96RY5 1269 aa12.57□□□□□ -0.4
NEO1-211ENST00000560808 GJA3Q9Y6H8 435 aa12.57□□□□□ -0.4
NEO1-211ENST00000560808 UBN2Q6ZU65 1347 aa12.57□□□□□ -0.4
NEO1-211ENST00000560808 PASKQ96RG2 1323 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms