RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 CNKSR1Q969H4 720 aa10.22□□□□□ -0.77
APH1B-209ENST00000560716 SNED1Q8TER0 1413 aa10.22□□□□□ -0.77
APH1B-209ENST00000560716 C21orf2O43822 256 aa10.21□□□□□ -0.77
APH1B-209ENST00000560716 DDNO94850 711 aaPredicted RBP10.21□□□□□ -0.77
APH1B-209ENST00000560716 SRGNP10124 158 aa10.21□□□□□ -0.77
APH1B-209ENST00000560716 HSPA8P11142 646 aaKnown RBP10.21□□□□□ -0.77
APH1B-209ENST00000560716 IL6STP40189 918 aaPredicted RBP10.21□□□□□ -0.77
APH1B-209ENST00000560716 AIDAQ96BJ3 306 aa10.21□□□□□ -0.77
APH1B-209ENST00000560716 TEX13AQ9BXU3 409 aaPredicted RBP10.21□□□□□ -0.77
APH1B-209ENST00000560716 LGR6Q9HBX8 967 aa10.21□□□□□ -0.77
APH1B-209ENST00000560716 STARD3NLO95772 234 aa10.2□□□□□ -0.78
APH1B-209ENST00000560716 MAP2K1Q02750 393 aaPredicted RBP10.2□□□□□ -0.78
APH1B-209ENST00000560716 TBC1D9BQ66K14 1250 aa10.2□□□□□ -0.78
APH1B-209ENST00000560716 ABHD8Q96I13 439 aa10.2□□□□□ -0.78
APH1B-209ENST00000560716 HEG1Q9ULI3 1381 aa10.19□□□□□ -0.78
APH1B-209ENST00000560716 PNMA8AQ86V59 439 aaPredicted RBP10.19□□□□□ -0.78
APH1B-209ENST00000560716 MASTLQ96GX5 879 aa10.19□□□□□ -0.78
APH1B-209ENST00000560716 FZD9O00144 591 aa10.18□□□□□ -0.78
APH1B-209ENST00000560716 LBX1P52954 281 aa10.18□□□□□ -0.78
APH1B-209ENST00000560716 SLC39A6Q13433 755 aa10.18□□□□□ -0.78
APH1B-209ENST00000560716 DEFB115Q30KQ5 88 aa10.18□□□□□ -0.78
APH1B-209ENST00000560716 PRPF40BQ6NWY9 871 aaKnown RBP10.18□□□□□ -0.78
APH1B-209ENST00000560716 CLEC4GQ6UXB4 293 aa10.18□□□□□ -0.78
APH1B-209ENST00000560716 ZNF622Q969S3 477 aaKnown RBP eCLIP10.18□□□□□ -0.78
APH1B-209ENST00000560716 SPINK5Q9NQ38 1064 aaPredicted RBP10.18□□□□□ -0.78
APH1B-209ENST00000560716 TNRC18O15417 2968 aaPredicted RBP10.18□□□□□ -0.78
APH1B-209ENST00000560716 LTBP1Q14766 1721 aa10.18□□□□□ -0.78
APH1B-209ENST00000560716 WDR33Q9C0J8 1336 aaKnown RBP10.17□□□□□ -0.78
APH1B-209ENST00000560716 CAMTA2O94983 1202 aa10.17□□□□□ -0.78
APH1B-209ENST00000560716 TNNT2P45379 298 aaPredicted RBP10.17□□□□□ -0.78
APH1B-209ENST00000560716 FKBP4Q02790 459 aaKnown RBP eCLIP10.17□□□□□ -0.78
APH1B-209ENST00000560716 HACL1Q9UJ83 578 aa10.17□□□□□ -0.78
APH1B-209ENST00000560716 EPHX2P34913 555 aa10.16□□□□□ -0.78
APH1B-209ENST00000560716 MKRN4PQ13434 485 aaPredicted RBP10.16□□□□□ -0.78
APH1B-209ENST00000560716 MTHFSDQ2M296 383 aaKnown RBP10.16□□□□□ -0.78
APH1B-209ENST00000560716 CCDC93Q567U6 631 aa10.16□□□□□ -0.78
APH1B-209ENST00000560716 CNBD1Q8NA66 436 aa10.16□□□□□ -0.78
APH1B-209ENST00000560716 SETDB2Q96T68 719 aa10.16□□□□□ -0.78
APH1B-209ENST00000560716 PANK3Q9H999 370 aa10.16□□□□□ -0.78
APH1B-209ENST00000560716 CEMIPQ8WUJ3 1361 aa10.15□□□□□ -0.78
APH1B-209ENST00000560716 NUP98P52948 1817 aa10.15□□□□□ -0.78
APH1B-209ENST00000560716 NPR1P16066 1061 aa10.15□□□□□ -0.78
APH1B-209ENST00000560716 CANXP27824 592 aaKnown RBP10.15□□□□□ -0.78
APH1B-209ENST00000560716 ST5P78524 1137 aa10.15□□□□□ -0.78
APH1B-209ENST00000560716 MLLT1Q03111 559 aaPredicted RBP10.15□□□□□ -0.78
APH1B-209ENST00000560716 FAM161AQ3B820 660 aa10.15□□□□□ -0.78
APH1B-209ENST00000560716 ZNF790Q6PG37 636 aa10.15□□□□□ -0.78
APH1B-209ENST00000560716 MORC1Q86VD1 984 aa10.15□□□□□ -0.78
APH1B-209ENST00000560716 RTKN2Q8IZC4 609 aa10.15□□□□□ -0.78
APH1B-209ENST00000560716 CNTROBQ8N137 903 aa10.15□□□□□ -0.78
APH1B-209ENST00000560716 GPC2Q8N158 579 aa10.15□□□□□ -0.78
APH1B-209ENST00000560716 ZNF496Q96IT1 587 aaPredicted RBP10.15□□□□□ -0.78
APH1B-209ENST00000560716 RNF39Q9H2S5 420 aa10.15□□□□□ -0.78
APH1B-209ENST00000560716 RIC1Q4ADV7 1423 aa10.15□□□□□ -0.79
APH1B-209ENST00000560716 ZNF541Q9H0D2 1346 aa10.14□□□□□ -0.79
APH1B-209ENST00000560716 MAP2K2P36507 400 aa10.14□□□□□ -0.79
APH1B-209ENST00000560716 GRIPAP1Q4V328 841 aa10.14□□□□□ -0.79
APH1B-209ENST00000560716 HHIPL1Q96JK4 782 aa10.14□□□□□ -0.79
APH1B-209ENST00000560716 PSMD1Q99460 953 aa10.14□□□□□ -0.79
APH1B-209ENST00000560716 COL3A1P02461 1466 aaPredicted RBP10.14□□□□□ -0.79
APH1B-209ENST00000560716 LAMB4A4D0S4 1761 aa10.14□□□□□ -0.79
APH1B-209ENST00000560716 CLSPNQ9HAW4 1339 aa10.13□□□□□ -0.79
APH1B-209ENST00000560716 ECE1P42892 770 aa10.13□□□□□ -0.79
APH1B-209ENST00000560716 CC2D2BQ6DHV5 1058 aa10.13□□□□□ -0.79
APH1B-209ENST00000560716 BICDL1Q6ZP65 573 aa10.13□□□□□ -0.79
APH1B-209ENST00000560716 TTC5Q8N0Z6 440 aa10.13□□□□□ -0.79
APH1B-209ENST00000560716 DDX21Q9NR30 783 aaKnown RBP eCLIP10.13□□□□□ -0.79
APH1B-209ENST00000560716 TBC1D2BQ9UPU7 963 aa10.13□□□□□ -0.79
APH1B-209ENST00000560716 CASP8AP2Q9UKL3 1982 aa10.13□□□□□ -0.79
APH1B-209ENST00000560716 COL4A5P29400 1685 aa10.12□□□□□ -0.79
APH1B-209ENST00000560716 CA12O43570 354 aa10.12□□□□□ -0.79
APH1B-209ENST00000560716 ALDH1B1P30837 517 aa10.12□□□□□ -0.79
APH1B-209ENST00000560716 IARSP41252 1262 aaKnown RBP10.12□□□□□ -0.79
APH1B-209ENST00000560716 CRY2Q49AN0 593 aa10.12□□□□□ -0.79
APH1B-209ENST00000560716 IL17REQ8NFR9 667 aa10.12□□□□□ -0.79
APH1B-209ENST00000560716 FMNL2Q96PY5 1086 aa10.11□□□□□ -0.79
APH1B-209ENST00000560716 TLL2Q9Y6L7 1015 aa10.11□□□□□ -0.79
APH1B-209ENST00000560716 GNAT3A8MTJ3 354 aa10.1□□□□□ -0.79
APH1B-209ENST00000560716 A1BGP04217 495 aa10.1□□□□□ -0.79
APH1B-209ENST00000560716 HOXA10P31260 410 aaPredicted RBP10.1□□□□□ -0.79
APH1B-209ENST00000560716 EAPPQ56P03 285 aaPredicted RBP10.1□□□□□ -0.79
APH1B-209ENST00000560716 CST9Q5W186 159 aa10.1□□□□□ -0.79
APH1B-209ENST00000560716 MAP1SQ66K74 1059 aaPredicted RBP10.1□□□□□ -0.79
APH1B-209ENST00000560716 TPTE2Q6XPS3 522 aa10.1□□□□□ -0.79
APH1B-209ENST00000560716 USP50Q70EL3 339 aaPredicted RBP10.1□□□□□ -0.79
APH1B-209ENST00000560716 DZIP3Q86Y13 1208 aaKnown RBP10.1□□□□□ -0.79
APH1B-209ENST00000560716 GAS2L2Q8NHY3 880 aa10.1□□□□□ -0.79
APH1B-209ENST00000560716 CAPNS2Q96L46 248 aa10.1□□□□□ -0.79
APH1B-209ENST00000560716 VPS33BQ9H267 617 aa10.1□□□□□ -0.79
APH1B-209ENST00000560716 PGAP2Q9UHJ9 254 aa10.1□□□□□ -0.79
APH1B-209ENST00000560716 ZNF652Q9Y2D9 606 aa10.1□□□□□ -0.79
APH1B-209ENST00000560716 IBTKQ9P2D0 1353 aaPredicted RBP10.1□□□□□ -0.79
APH1B-209ENST00000560716 NPC1L1Q9UHC9 1359 aa10.1□□□□□ -0.79
APH1B-209ENST00000560716 PDE4DIPQ5VU43 2346 aa10.1□□□□□ -0.79
APH1B-209ENST00000560716 KIF7Q2M1P5 1343 aa10.09□□□□□ -0.79
APH1B-209ENST00000560716 RNF123Q5XPI4 1314 aa10.09□□□□□ -0.79
APH1B-209ENST00000560716 DIAPH1O60610 1272 aaKnown RBP10.09□□□□□ -0.79
APH1B-209ENST00000560716 SCNN1DP51172 638 aa10.09□□□□□ -0.79
APH1B-209ENST00000560716 TEFQ10587 303 aa10.09□□□□□ -0.79
APH1B-209ENST00000560716 SYNE4Q8N205 404 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms