RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 KDM2BQ8NHM5 1336 aa23.71■■□□□ 1.39
RPL28-210ENST00000560583 LMNB1P20700 586 aa23.71■■□□□ 1.39
RPL28-210ENST00000560583 CLEC4GQ6UXB4 293 aa23.71■■□□□ 1.39
RPL28-210ENST00000560583 ZNF622Q969S3 477 aaKnown RBP eCLIP23.71■■□□□ 1.39
RPL28-210ENST00000560583 PDZRN3Q9UPQ7 1066 aa23.71■■□□□ 1.39
RPL28-210ENST00000560583 NEFMP07197 916 aa23.69■■□□□ 1.38
RPL28-210ENST00000560583 ST5P78524 1137 aa23.69■■□□□ 1.38
RPL28-210ENST00000560583 MAPK8IP3Q9UPT6 1336 aa23.68■■□□□ 1.38
RPL28-210ENST00000560583 RGL2O15211 777 aa23.68■■□□□ 1.38
RPL28-210ENST00000560583 SRGNP10124 158 aa23.68■■□□□ 1.38
RPL28-210ENST00000560583 EIF4A1P60842 406 aaKnown RBP23.68■■□□□ 1.38
RPL28-210ENST00000560583 RBM46Q8TBY0 533 aaKnown RBP23.68■■□□□ 1.38
RPL28-210ENST00000560583 ZNF652Q9Y2D9 606 aa23.68■■□□□ 1.38
RPL28-210ENST00000560583 C21orf2O43822 256 aa23.67■■□□□ 1.38
RPL28-210ENST00000560583 PNISRQ8TF01 805 aaKnown RBP23.67■■□□□ 1.38
RPL28-210ENST00000560583 ZNF219Q9P2Y4 722 aaPredicted RBP23.67■■□□□ 1.38
RPL28-210ENST00000560583 RALBP1Q15311 655 aa23.66■■□□□ 1.38
RPL28-210ENST00000560583 HLFQ16534 295 aa23.66■■□□□ 1.38
RPL28-210ENST00000560583 STYK1Q6J9G0 422 aa23.66■■□□□ 1.38
RPL28-210ENST00000560583 NBPF5PQ86XG9 351 aaPredicted RBP23.66■■□□□ 1.38
RPL28-210ENST00000560583 RRAGCQ9HB90 399 aa23.66■■□□□ 1.38
RPL28-210ENST00000560583 NPHP1O15259 732 aa23.65■■□□□ 1.38
RPL28-210ENST00000560583 PRPF40BQ6NWY9 871 aaKnown RBP23.65■■□□□ 1.38
RPL28-210ENST00000560583 NIP7Q9Y221 180 aaKnown RBP eCLIP23.65■■□□□ 1.38
RPL28-210ENST00000560583 MASTLQ96GX5 879 aa23.64■■□□□ 1.37
RPL28-210ENST00000560583 LTBP3Q9NS15 1303 aa23.63■■□□□ 1.37
RPL28-210ENST00000560583 GLTPD2A6NH11 291 aa23.63■■□□□ 1.37
RPL28-210ENST00000560583 APLP1P51693 650 aa23.63■■□□□ 1.37
RPL28-210ENST00000560583 CNKSR1Q969H4 720 aa23.63■■□□□ 1.37
RPL28-210ENST00000560583 ABCC12Q96J65 1359 aa23.63■■□□□ 1.37
RPL28-210ENST00000560583 KLRG2A4D1S0 409 aaPredicted RBP23.62■■□□□ 1.37
RPL28-210ENST00000560583 DDX10Q13206 875 aaKnown RBP23.62■■□□□ 1.37
RPL28-210ENST00000560583 PNNQ9H307 717 aaKnown RBP23.62■■□□□ 1.37
RPL28-210ENST00000560583 C16orf71Q8IYS4 520 aaPredicted RBP23.61■■□□□ 1.37
RPL28-210ENST00000560583 MYBBP1AQ9BQG0 1328 aaKnown RBP23.6■■□□□ 1.37
RPL28-210ENST00000560583 FAM177BA6PVY3 158 aa23.6■■□□□ 1.37
RPL28-210ENST00000560583 TTLL7Q6ZT98 887 aa23.6■■□□□ 1.37
RPL28-210ENST00000560583 NGEFQ8N5V2 710 aa23.6■■□□□ 1.37
RPL28-210ENST00000560583 C7orf43Q8WVR3 580 aa23.6■■□□□ 1.37
RPL28-210ENST00000560583 TAOK3Q9H2K8 898 aa23.6■■□□□ 1.37
RPL28-210ENST00000560583 ANKRD36CQ5JPF3 1778 aa23.6■■□□□ 1.37
RPL28-210ENST00000560583 MAP3K15Q6ZN16 1313 aa23.59■■□□□ 1.37
RPL28-210ENST00000560583 FSTL1Q12841 308 aa23.59■■□□□ 1.37
RPL28-210ENST00000560583 TPTE2Q6XPS3 522 aa23.59■■□□□ 1.37
RPL28-210ENST00000560583 RRP7AQ9Y3A4 280 aaKnown RBP23.59■■□□□ 1.37
RPL28-210ENST00000560583 RIPK4P57078 832 aa23.58■■□□□ 1.37
RPL28-210ENST00000560583 UBN2Q6ZU65 1347 aa23.58■■□□□ 1.36
RPL28-210ENST00000560583 POTECB2RU33 542 aa23.57■■□□□ 1.36
RPL28-210ENST00000560583 ERVV-1B6SEH8 477 aa23.57■■□□□ 1.36
RPL28-210ENST00000560583 MYL6BP14649 208 aa23.57■■□□□ 1.36
RPL28-210ENST00000560583 NPR1P16066 1061 aa23.57■■□□□ 1.36
RPL28-210ENST00000560583 TMPOP42166 694 aaKnown RBP23.57■■□□□ 1.36
RPL28-210ENST00000560583 LRP10Q7Z4F1 713 aa23.57■■□□□ 1.36
RPL28-210ENST00000560583 DNAJC5GQ8N7S2 189 aa23.57■■□□□ 1.36
RPL28-210ENST00000560583 TSPYL4Q9UJ04 414 aa23.57■■□□□ 1.36
RPL28-210ENST00000560583 RIC1Q4ADV7 1423 aa23.57■■□□□ 1.36
RPL28-210ENST00000560583 SNED1Q8TER0 1413 aa23.57■■□□□ 1.36
RPL28-210ENST00000560583 IBTKQ9P2D0 1353 aaPredicted RBP23.56■■□□□ 1.36
RPL28-210ENST00000560583 ERFEQ4G0M1 354 aa23.56■■□□□ 1.36
RPL28-210ENST00000560583 ERBB4Q15303 1308 aa23.56■■□□□ 1.36
RPL28-210ENST00000560583 HTRA3P83110 453 aa23.55■■□□□ 1.36
RPL28-210ENST00000560583 SOGA3Q5TF21 947 aa23.55■■□□□ 1.36
RPL28-210ENST00000560583 OLFM4Q6UX06 510 aa23.55■■□□□ 1.36
RPL28-210ENST00000560583 ZBTB3Q9H5J0 574 aa23.55■■□□□ 1.36
RPL28-210ENST00000560583 VEGFAP15692 232 aaPredicted RBP23.54■■□□□ 1.36
RPL28-210ENST00000560583 KIF6Q6ZMV9 814 aa23.54■■□□□ 1.36
RPL28-210ENST00000560583 NUTM1Q86Y26 1132 aa23.54■■□□□ 1.36
RPL28-210ENST00000560583 CCDC146Q8IYE0 955 aa23.54■■□□□ 1.36
RPL28-210ENST00000560583 LAMB2P55268 1798 aa23.53■■□□□ 1.36
RPL28-210ENST00000560583 PDIA6Q15084 440 aa23.53■■□□□ 1.36
RPL28-210ENST00000560583 PROSER3Q2NL68 480 aa23.53■■□□□ 1.36
RPL28-210ENST00000560583 CRY2Q49AN0 593 aa23.53■■□□□ 1.36
RPL28-210ENST00000560583 CCDC93Q567U6 631 aa23.53■■□□□ 1.36
RPL28-210ENST00000560583 SMC1BQ8NDV3 1235 aa23.53■■□□□ 1.36
RPL28-210ENST00000560583 GPTP24298 496 aa23.52■■□□□ 1.36
RPL28-210ENST00000560583 LMOD3Q0VAK6 560 aa23.51■■□□□ 1.35
RPL28-210ENST00000560583 ZNF34Q8IZ26 560 aa23.51■■□□□ 1.35
RPL28-210ENST00000560583 NYXQ9GZU5 481 aa23.51■■□□□ 1.35
RPL28-210ENST00000560583 BABAM1Q9NWV8 329 aa23.51■■□□□ 1.35
RPL28-210ENST00000560583 SCN4AP35499 1836 aa23.5■■□□□ 1.35
RPL28-210ENST00000560583 ANXA1P04083 346 aa23.5■■□□□ 1.35
RPL28-210ENST00000560583 SUSD4Q5VX71 490 aa23.5■■□□□ 1.35
RPL28-210ENST00000560583 GIGYF2Q6Y7W6 1299 aaKnown RBP23.5■■□□□ 1.35
RPL28-210ENST00000560583 NTSR2O95665 410 aa23.49■■□□□ 1.35
RPL28-210ENST00000560583 GTF2E1P29083 439 aaPredicted RBP23.49■■□□□ 1.35
RPL28-210ENST00000560583 FKBP4Q02790 459 aaKnown RBP eCLIP23.49■■□□□ 1.35
RPL28-210ENST00000560583 DPY19L2Q6NUT2 758 aa23.49■■□□□ 1.35
RPL28-210ENST00000560583 TRIM35Q9UPQ4 493 aa23.49■■□□□ 1.35
RPL28-210ENST00000560583 COL4A5P29400 1685 aa23.48■■□□□ 1.35
RPL28-210ENST00000560583 DDNO94850 711 aaPredicted RBP23.48■■□□□ 1.35
RPL28-210ENST00000560583 EIF2S2P20042 333 aaKnown RBP23.48■■□□□ 1.35
RPL28-210ENST00000560583 ZEB1P37275 1124 aaPredicted RBP23.48■■□□□ 1.35
RPL28-210ENST00000560583 KRT24Q2M2I5 525 aa23.48■■□□□ 1.35
RPL28-210ENST00000560583 NEUROD2Q15784 382 aa23.47■■□□□ 1.35
RPL28-210ENST00000560583 SLC51AQ86UW1 340 aa23.47■■□□□ 1.35
RPL28-210ENST00000560583 RUNDC1Q96C34 613 aa23.47■■□□□ 1.35
RPL28-210ENST00000560583 ZNF277Q9NRM2 450 aaPredicted RBP23.47■■□□□ 1.35
RPL28-210ENST00000560583 C3orf67Q6ZVT6 689 aa23.46■■□□□ 1.35
RPL28-210ENST00000560583 ZNF541Q9H0D2 1346 aa23.46■■□□□ 1.35
RPL28-210ENST00000560583 ADAMTSL1Q8N6G6 1762 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms