RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 SSFA2P28290 1259 aa8.1□□□□□ -1.11
AP4E1-203ENST00000560508 SYCP1Q15431 976 aa8.1□□□□□ -1.11
AP4E1-203ENST00000560508 CARD14Q9BXL6 1004 aa8.1□□□□□ -1.11
AP4E1-203ENST00000560508 EXOC5O00471 708 aa8.1□□□□□ -1.11
AP4E1-203ENST00000560508 PI4KAP2A4QPH2 592 aa8.1□□□□□ -1.11
AP4E1-203ENST00000560508 PI4KAP1Q8N8J0 262 aa8.1□□□□□ -1.11
AP4E1-203ENST00000560508 C8orf76Q96K31 380 aa8.1□□□□□ -1.11
AP4E1-203ENST00000560508 SEC63Q9UGP8 760 aaKnown RBP8.1□□□□□ -1.11
AP4E1-203ENST00000560508 DMRT2Q9Y5R5 561 aa8.1□□□□□ -1.11
AP4E1-203ENST00000560508 GJB2P29033 226 aa8.1□□□□□ -1.11
AP4E1-203ENST00000560508 ANO10Q9NW15 660 aa8.1□□□□□ -1.11
AP4E1-203ENST00000560508 ABCF2Q9UG63 623 aa8.09□□□□□ -1.11
AP4E1-203ENST00000560508 SLC12A7Q9Y666 1083 aa8.09□□□□□ -1.11
AP4E1-203ENST00000560508 ALDH1L1O75891 902 aa8.09□□□□□ -1.11
AP4E1-203ENST00000560508 SLF2Q8IX21 1173 aa8.09□□□□□ -1.11
AP4E1-203ENST00000560508 RDXP35241 583 aaKnown RBP8.09□□□□□ -1.11
AP4E1-203ENST00000560508 DZIP1Q86YF9 867 aaKnown RBP8.09□□□□□ -1.11
AP4E1-203ENST00000560508 C8orf58Q8NAV2 365 aa8.09□□□□□ -1.11
AP4E1-203ENST00000560508 POLR3DP05423 398 aaPredicted RBP8.09□□□□□ -1.11
AP4E1-203ENST00000560508 ATP8B2P98198 1209 aa8.09□□□□□ -1.11
AP4E1-203ENST00000560508 CAMK4Q16566 473 aa8.09□□□□□ -1.12
AP4E1-203ENST00000560508 NPHP3Q7Z494 1330 aa8.09□□□□□ -1.12
AP4E1-203ENST00000560508 PCDHB15Q9Y5E8 787 aa8.09□□□□□ -1.12
AP4E1-203ENST00000560508 SDSP20132 328 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 FBLN1P23142 703 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 NOM1Q5C9Z4 860 aaKnown RBP8.08□□□□□ -1.12
AP4E1-203ENST00000560508 DEF6Q9H4E7 631 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 ANKIB1Q9P2G1 1089 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 MINDY4BA8MYZ0 360 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 RHPN1Q8TCX5 695 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 MEIS3Q99687 375 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 PHF23Q9BUL5 403 aaPredicted RBP8.08□□□□□ -1.12
AP4E1-203ENST00000560508 BMP2KQ9NSY1 1161 aaPredicted RBP8.08□□□□□ -1.12
AP4E1-203ENST00000560508 GOLGA8BA8MQT2 603 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 GOLIM4O00461 696 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 TMEM132AQ24JP5 1023 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 WWC2Q6AWC2 1192 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 ZCRB1Q8TBF4 217 aaKnown RBP8.08□□□□□ -1.12
AP4E1-203ENST00000560508 CDC5LQ99459 802 aaKnown RBP8.08□□□□□ -1.12
AP4E1-203ENST00000560508 TANGO6Q9C0B7 1094 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 MYOM2P54296 1465 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 MPHOSPH10O00566 681 aaKnown RBP8.08□□□□□ -1.12
AP4E1-203ENST00000560508 MTHFSDQ2M296 383 aaKnown RBP8.08□□□□□ -1.12
AP4E1-203ENST00000560508 RPGRQ92834 1020 aaKnown RBP8.08□□□□□ -1.12
AP4E1-203ENST00000560508 GOLGA8AA7E2F4 631 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 STX6O43752 255 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 ANKRD13DQ6ZTN6 518 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 CCDC112Q8NEF3 446 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 SNX21Q969T3 373 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 BCL11BQ9C0K0 894 aaPredicted RBP8.08□□□□□ -1.12
AP4E1-203ENST00000560508 ZBTB3Q9H5J0 574 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 MKNK2Q9HBH9 465 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 CDC42BPBQ9Y5S2 1711 aa8.08□□□□□ -1.12
AP4E1-203ENST00000560508 PRDM15P57071 1507 aaPredicted RBP8.07□□□□□ -1.12
AP4E1-203ENST00000560508 UQCRHLA0A096LP55 91 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 UQCRHP07919 91 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 UQCRFS1P1P0C7P4 283 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 ANAPC15P60006 121 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 NEK1Q96PY6 1258 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 DCAF8L1A6NGE4 600 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 IQCEQ6IPM2 695 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 IQCA1Q86XH1 822 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 ZSCAN29Q8IWY8 852 aaPredicted RBP8.07□□□□□ -1.12
AP4E1-203ENST00000560508 ESYT1Q9BSJ8 1104 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 CLASP1Q7Z460 1538 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 PER1O15534 1290 aaPredicted RBP8.07□□□□□ -1.12
AP4E1-203ENST00000560508 KSR2Q6VAB6 950 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 CATIPQ7Z7H3 387 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 DDX19AQ9NUU7 478 aaKnown RBP8.07□□□□□ -1.12
AP4E1-203ENST00000560508 CWC15Q9P013 229 aaKnown RBP8.07□□□□□ -1.12
AP4E1-203ENST00000560508 SBNO1A3KN83 1393 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 GRM8O00222 908 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 C8orf34Q49A92 452 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 ZRANB1Q9UGI0 708 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 TRPM1Q7Z4N2 1603 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 ZNF76P36508 570 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 PDE1AP54750 535 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 VSIG10Q8N0Z9 540 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 ZHX3Q9H4I2 956 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 TTC41PQ6P2S7 1318 aa8.07□□□□□ -1.12
AP4E1-203ENST00000560508 IFIT3O14879 490 aaKnown RBP8.06□□□□□ -1.12
AP4E1-203ENST00000560508 UBE3BQ7Z3V4 1068 aa8.06□□□□□ -1.12
AP4E1-203ENST00000560508 ZNF397Q8NF99 534 aaPredicted RBP8.06□□□□□ -1.12
AP4E1-203ENST00000560508 ESPNB1AK53 854 aa8.06□□□□□ -1.12
AP4E1-203ENST00000560508 ATP5J2-PTCD1G3V325 749 aa8.06□□□□□ -1.12
AP4E1-203ENST00000560508 VAMP4O75379 141 aa8.06□□□□□ -1.12
AP4E1-203ENST00000560508 HOXC9P31274 260 aa8.06□□□□□ -1.12
AP4E1-203ENST00000560508 ZSCAN30Q86W11 494 aa8.06□□□□□ -1.12
AP4E1-203ENST00000560508 NCOA7Q8NI08 942 aa8.06□□□□□ -1.12
AP4E1-203ENST00000560508 CTCFLQ8NI51 663 aaPredicted RBP8.06□□□□□ -1.12
AP4E1-203ENST00000560508 ARHGEF10O15013 1369 aa8.06□□□□□ -1.12
AP4E1-203ENST00000560508 CCDC152Q4G0S7 254 aa8.06□□□□□ -1.12
AP4E1-203ENST00000560508 ZNF444Q8N0Y2 327 aaPredicted RBP8.06□□□□□ -1.12
AP4E1-203ENST00000560508 TMOD2Q9NZR1 351 aa8.06□□□□□ -1.12
AP4E1-203ENST00000560508 ERLIN2O94905 339 aa8.06□□□□□ -1.12
AP4E1-203ENST00000560508 BAG4O95429 457 aaKnown RBP8.06□□□□□ -1.12
AP4E1-203ENST00000560508 ADAMTS2O95450 1211 aa8.06□□□□□ -1.12
AP4E1-203ENST00000560508 GPTP24298 496 aa8.06□□□□□ -1.12
AP4E1-203ENST00000560508 CCDC181Q5TID7 509 aa8.06□□□□□ -1.12
AP4E1-203ENST00000560508 CEP85Q6P2H3 762 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms