RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 ADCY9O60503 1353 aa11.92□□□□□ -0.5
RTF1-206ENST00000560447 ZBTB7CA1YPR0 619 aa11.91□□□□□ -0.5
RTF1-206ENST00000560447 LMOD2Q6P5Q4 547 aa11.91□□□□□ -0.5
RTF1-206ENST00000560447 MPRIPQ6WCQ1 1025 aa11.91□□□□□ -0.5
RTF1-206ENST00000560447 C16orf71Q8IYS4 520 aaPredicted RBP11.91□□□□□ -0.5
RTF1-206ENST00000560447 IFNL2Q8IZJ0 200 aa11.91□□□□□ -0.5
RTF1-206ENST00000560447 KIF1BPQ96EK5 621 aa11.91□□□□□ -0.5
RTF1-206ENST00000560447 PHAXQ9H814 394 aaKnown RBP11.91□□□□□ -0.5
RTF1-206ENST00000560447 CHPF2Q9P2E5 772 aa11.91□□□□□ -0.5
RTF1-206ENST00000560447 AXIN2Q9Y2T1 843 aa11.91□□□□□ -0.5
RTF1-206ENST00000560447 STRCQ7RTU9 1775 aa11.91□□□□□ -0.5
RTF1-206ENST00000560447 ABCA3Q99758 1704 aa11.91□□□□□ -0.5
RTF1-206ENST00000560447 UTYO14607 1347 aa11.9□□□□□ -0.5
RTF1-206ENST00000560447 USP42Q9H9J4 1324 aaKnown RBP11.9□□□□□ -0.5
RTF1-206ENST00000560447 PNMA6EA0A0J9YXQ4 647 aa11.9□□□□□ -0.5
RTF1-206ENST00000560447 DDX11L8A8MPP1 907 aa11.9□□□□□ -0.5
RTF1-206ENST00000560447 KDM6AO15550 1401 aaPredicted RBP11.9□□□□□ -0.5
RTF1-206ENST00000560447 ANAPC15P60006 121 aa11.9□□□□□ -0.5
RTF1-206ENST00000560447 ZNF467Q7Z7K2 595 aaPredicted RBP11.9□□□□□ -0.5
RTF1-206ENST00000560447 ERC1Q8IUD2 1116 aa11.9□□□□□ -0.5
RTF1-206ENST00000560447 SLC52A2Q9HAB3 445 aa11.9□□□□□ -0.5
RTF1-206ENST00000560447 ERBB4Q15303 1308 aa11.89□□□□□ -0.51
RTF1-206ENST00000560447 PI4KAP2A4QPH2 592 aa11.89□□□□□ -0.51
RTF1-206ENST00000560447 SMARCA5O60264 1052 aaPredicted RBP11.89□□□□□ -0.51
RTF1-206ENST00000560447 PHKG2P15735 406 aa11.89□□□□□ -0.51
RTF1-206ENST00000560447 EIF2S2P20042 333 aaKnown RBP11.89□□□□□ -0.51
RTF1-206ENST00000560447 MCCP23508 829 aa11.89□□□□□ -0.51
RTF1-206ENST00000560447 MCM2P49736 904 aa11.89□□□□□ -0.51
RTF1-206ENST00000560447 XPCQ01831 940 aaPredicted RBP11.89□□□□□ -0.51
RTF1-206ENST00000560447 MAMSTRQ6ZN01 415 aa11.89□□□□□ -0.51
RTF1-206ENST00000560447 PI4KAP1Q8N8J0 262 aa11.89□□□□□ -0.51
RTF1-206ENST00000560447 LINS1Q8NG48 757 aa11.89□□□□□ -0.51
RTF1-206ENST00000560447 DCAF5Q96JK2 942 aa11.89□□□□□ -0.51
RTF1-206ENST00000560447 EXOC6BQ9Y2D4 811 aa11.89□□□□□ -0.51
RTF1-206ENST00000560447 MEGF6O75095 1541 aa11.89□□□□□ -0.51
RTF1-206ENST00000560447 UBR2Q8IWV8 1755 aa11.89□□□□□ -0.51
RTF1-206ENST00000560447 COL15A1P39059 1388 aa11.89□□□□□ -0.51
RTF1-206ENST00000560447 NHSL1Q5SYE7 1610 aa11.89□□□□□ -0.51
RTF1-206ENST00000560447 TTC41PQ6P2S7 1318 aa11.88□□□□□ -0.51
RTF1-206ENST00000560447 ST18O60284 1047 aa11.88□□□□□ -0.51
RTF1-206ENST00000560447 MCM4P33991 863 aa11.88□□□□□ -0.51
RTF1-206ENST00000560447 ZNF790Q6PG37 636 aa11.88□□□□□ -0.51
RTF1-206ENST00000560447 CLEC17AQ6ZS10 378 aa11.88□□□□□ -0.51
RTF1-206ENST00000560447 PPP1R42Q7Z4L9 355 aa11.88□□□□□ -0.51
RTF1-206ENST00000560447 OTUD7AQ8TE49 926 aaPredicted RBP11.88□□□□□ -0.51
RTF1-206ENST00000560447 NECTIN2Q92692 538 aa11.88□□□□□ -0.51
RTF1-206ENST00000560447 PAPPAQ13219 1627 aa11.88□□□□□ -0.51
RTF1-206ENST00000560447 KCNQ3O43525 872 aa11.87□□□□□ -0.51
RTF1-206ENST00000560447 IRX5P78411 483 aaPredicted RBP11.87□□□□□ -0.51
RTF1-206ENST00000560447 LARP1Q6PKG0 1096 aaKnown RBP11.87□□□□□ -0.51
RTF1-206ENST00000560447 GBP4Q96PP9 640 aa11.87□□□□□ -0.51
RTF1-206ENST00000560447 CWC22Q9HCG8 908 aaKnown RBP11.87□□□□□ -0.51
RTF1-206ENST00000560447 NLRP2Q9NX02 1062 aa11.87□□□□□ -0.51
RTF1-206ENST00000560447 ISY1Q9ULR0 285 aaKnown RBP11.87□□□□□ -0.51
RTF1-206ENST00000560447 SOS2Q07890 1332 aaPredicted RBP11.86□□□□□ -0.51
RTF1-206ENST00000560447 SRGAP3O43295 1099 aa11.86□□□□□ -0.51
RTF1-206ENST00000560447 SURF6O75683 361 aaKnown RBP11.86□□□□□ -0.51
RTF1-206ENST00000560447 ZC3H6P61129 1189 aaKnown RBP11.86□□□□□ -0.51
RTF1-206ENST00000560447 RAB3GAP1Q15042 981 aa11.86□□□□□ -0.51
RTF1-206ENST00000560447 RHPN1Q8TCX5 695 aa11.86□□□□□ -0.51
RTF1-206ENST00000560447 ESYT1Q9BSJ8 1104 aa11.86□□□□□ -0.51
RTF1-206ENST00000560447 GLI3P10071 1580 aa11.86□□□□□ -0.51
RTF1-206ENST00000560447 ARFGEF2Q9Y6D5 1785 aa11.86□□□□□ -0.51
RTF1-206ENST00000560447 AFDNP55196 1824 aaKnown RBP11.86□□□□□ -0.51
RTF1-206ENST00000560447 HSP90AA1P07900 732 aaKnown RBP11.85□□□□□ -0.51
RTF1-206ENST00000560447 NUCB2P80303 420 aa11.85□□□□□ -0.51
RTF1-206ENST00000560447 SKOR2Q2VWA4 1001 aaPredicted RBP11.85□□□□□ -0.51
RTF1-206ENST00000560447 C9orf78Q9NZ63 289 aaPredicted RBP11.85□□□□□ -0.51
RTF1-206ENST00000560447 MAP3K2Q9Y2U5 619 aa11.85□□□□□ -0.51
RTF1-206ENST00000560447 WDR17Q8IZU2 1322 aa11.85□□□□□ -0.51
RTF1-206ENST00000560447 APBB1O00213 710 aa11.84□□□□□ -0.51
RTF1-206ENST00000560447 SNRPA1P09661 255 aaKnown RBP11.84□□□□□ -0.51
RTF1-206ENST00000560447 NBPF7P0C2Y1 421 aaPredicted RBP11.84□□□□□ -0.51
RTF1-206ENST00000560447 CSB-PGBD3P0DP91 1061 aa11.84□□□□□ -0.51
RTF1-206ENST00000560447 CHMLP26374 656 aa11.84□□□□□ -0.51
RTF1-206ENST00000560447 NEXNQ0ZGT2 675 aa11.84□□□□□ -0.51
RTF1-206ENST00000560447 PDIA6Q15084 440 aa11.84□□□□□ -0.51
RTF1-206ENST00000560447 L1TD1Q5T7N2 865 aaKnown RBP11.84□□□□□ -0.51
RTF1-206ENST00000560447 GPATCH3Q96I76 525 aa11.84□□□□□ -0.51
RTF1-206ENST00000560447 FMNL2Q96PY5 1086 aa11.84□□□□□ -0.51
RTF1-206ENST00000560447 SHANK3Q9BYB0 1731 aa11.83□□□□□ -0.52
RTF1-206ENST00000560447 GRM8O00222 908 aa11.83□□□□□ -0.52
RTF1-206ENST00000560447 GLRX3O76003 335 aaKnown RBP11.83□□□□□ -0.52
RTF1-206ENST00000560447 BRINP3Q76B58 766 aa11.83□□□□□ -0.52
RTF1-206ENST00000560447 TTC5Q8N0Z6 440 aa11.83□□□□□ -0.52
RTF1-206ENST00000560447 CNTROBQ8N137 903 aa11.83□□□□□ -0.52
RTF1-206ENST00000560447 CLASRPQ8N2M8 674 aaKnown RBP11.83□□□□□ -0.52
RTF1-206ENST00000560447 PCDH11XQ9BZA7 1347 aa11.83□□□□□ -0.52
RTF1-206ENST00000560447 PCDH11YQ9BZA8 1340 aa11.83□□□□□ -0.52
RTF1-206ENST00000560447 COL5A2P05997 1499 aaPredicted RBP11.83□□□□□ -0.52
RTF1-206ENST00000560447 ERVV-2B6SEH9 535 aa11.82□□□□□ -0.52
RTF1-206ENST00000560447 NKX1-1Q15270 411 aaPredicted RBP11.82□□□□□ -0.52
RTF1-206ENST00000560447 PI4K2BQ8TCG2 481 aa11.82□□□□□ -0.52
RTF1-206ENST00000560447 METTL22Q9BUU2 404 aaPredicted RBP11.82□□□□□ -0.52
RTF1-206ENST00000560447 SCUBE2Q9NQ36 999 aa11.82□□□□□ -0.52
RTF1-206ENST00000560447 NUP188Q5SRE5 1749 aa11.82□□□□□ -0.52
RTF1-206ENST00000560447 TRIM6-TRIM34B2RNG4 842 aa11.81□□□□□ -0.52
RTF1-206ENST00000560447 GOLGA6L22H0YM25 854 aa11.81□□□□□ -0.52
RTF1-206ENST00000560447 HIP1O00291 1037 aa11.81□□□□□ -0.52
RTF1-206ENST00000560447 TICAM2Q86XR7 235 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms