RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 SLC39A6Q13433 755 aa12.64□□□□□ -0.39
SMAD3-215ENST00000560424 CCDC93Q567U6 631 aa12.64□□□□□ -0.39
SMAD3-215ENST00000560424 TBC1D9BQ66K14 1250 aa12.64□□□□□ -0.39
SMAD3-215ENST00000560424 STYK1Q6J9G0 422 aa12.64□□□□□ -0.39
SMAD3-215ENST00000560424 PRR5LQ6MZQ0 368 aa12.64□□□□□ -0.39
SMAD3-215ENST00000560424 AEBP1Q8IUX7 1158 aa12.64□□□□□ -0.39
SMAD3-215ENST00000560424 TTC5Q8N0Z6 440 aa12.64□□□□□ -0.39
SMAD3-215ENST00000560424 CNBD1Q8NA66 436 aa12.64□□□□□ -0.39
SMAD3-215ENST00000560424 MASTLQ96GX5 879 aa12.64□□□□□ -0.39
SMAD3-215ENST00000560424 COL11A2P13942 1736 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-215ENST00000560424 MAP1SQ66K74 1059 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-215ENST00000560424 VSIG10Q8N0Z9 540 aa12.63□□□□□ -0.39
SMAD3-215ENST00000560424 SETDB2Q96T68 719 aa12.63□□□□□ -0.39
SMAD3-215ENST00000560424 ANKRD31Q8N7Z5 1873 aa12.63□□□□□ -0.39
SMAD3-215ENST00000560424 CAPNS2Q96L46 248 aa12.62□□□□□ -0.39
SMAD3-215ENST00000560424 RNF123Q5XPI4 1314 aa12.62□□□□□ -0.39
SMAD3-215ENST00000560424 LMOD1P29536 600 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-215ENST00000560424 GPR101Q96P66 508 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-215ENST00000560424 ZNF541Q9H0D2 1346 aa12.61□□□□□ -0.39
SMAD3-215ENST00000560424 SLX4Q8IY92 1834 aa12.6□□□□□ -0.39
SMAD3-215ENST00000560424 SRGNP10124 158 aa12.6□□□□□ -0.39
SMAD3-215ENST00000560424 EIF5P55010 431 aaKnown RBP12.6□□□□□ -0.39
SMAD3-215ENST00000560424 FKBP4Q02790 459 aaKnown RBP eCLIP12.6□□□□□ -0.39
SMAD3-215ENST00000560424 LGR6Q9HBX8 967 aa12.6□□□□□ -0.39
SMAD3-215ENST00000560424 DDX21Q9NR30 783 aaKnown RBP eCLIP12.6□□□□□ -0.39
SMAD3-215ENST00000560424 ZNF277Q9NRM2 450 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-215ENST00000560424 TBC1D2BQ9UPU7 963 aa12.6□□□□□ -0.39
SMAD3-215ENST00000560424 SCN7AQ01118 1682 aa12.59□□□□□ -0.39
SMAD3-215ENST00000560424 ZNF316A6NFI3 1004 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-215ENST00000560424 RNMTO43148 476 aaKnown RBP12.59□□□□□ -0.39
SMAD3-215ENST00000560424 CYP4F22Q6NT55 531 aa12.59□□□□□ -0.39
SMAD3-215ENST00000560424 RTKN2Q8IZC4 609 aa12.59□□□□□ -0.39
SMAD3-215ENST00000560424 JDP2Q8WYK2 163 aa12.59□□□□□ -0.39
SMAD3-215ENST00000560424 TSKSQ9UJT2 592 aa12.59□□□□□ -0.39
SMAD3-215ENST00000560424 ARFGEF2Q9Y6D5 1785 aa12.58□□□□□ -0.39
SMAD3-215ENST00000560424 CA12O43570 354 aa12.58□□□□□ -0.4
SMAD3-215ENST00000560424 GPC2Q8N158 579 aa12.58□□□□□ -0.4
SMAD3-215ENST00000560424 TEX13AQ9BXU3 409 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-215ENST00000560424 MCOLN1Q9GZU1 580 aa12.58□□□□□ -0.4
SMAD3-215ENST00000560424 ADAMTSL1Q8N6G6 1762 aa12.58□□□□□ -0.4
SMAD3-215ENST00000560424 MRC1P22897 1456 aa12.58□□□□□ -0.4
SMAD3-215ENST00000560424 IARSP41252 1262 aaKnown RBP12.57□□□□□ -0.4
SMAD3-215ENST00000560424 EIF6P56537 245 aaKnown RBP12.57□□□□□ -0.4
SMAD3-215ENST00000560424 MORC1Q86VD1 984 aa12.57□□□□□ -0.4
SMAD3-215ENST00000560424 NBPF5PQ86XG9 351 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-215ENST00000560424 GJA3Q9Y6H8 435 aa12.57□□□□□ -0.4
SMAD3-215ENST00000560424 THSD7BQ9C0I4 1608 aa12.56□□□□□ -0.4
SMAD3-215ENST00000560424 NPR1P16066 1061 aa12.56□□□□□ -0.4
SMAD3-215ENST00000560424 MAP2K2P36507 400 aa12.56□□□□□ -0.4
SMAD3-215ENST00000560424 IL6STP40189 918 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-215ENST00000560424 DGKZQ13574 1117 aa12.56□□□□□ -0.4
SMAD3-215ENST00000560424 FZD9O00144 591 aa12.55□□□□□ -0.4
SMAD3-215ENST00000560424 TEFQ10587 303 aa12.55□□□□□ -0.4
SMAD3-215ENST00000560424 ZNF652Q9Y2D9 606 aa12.55□□□□□ -0.4
SMAD3-215ENST00000560424 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
SMAD3-215ENST00000560424 SYNE4Q8N205 404 aa12.54□□□□□ -0.4
SMAD3-215ENST00000560424 TLL2Q9Y6L7 1015 aa12.54□□□□□ -0.4
SMAD3-215ENST00000560424 UBR2Q8IWV8 1755 aa12.53□□□□□ -0.4
SMAD3-215ENST00000560424 AOC2O75106 756 aa12.53□□□□□ -0.4
SMAD3-215ENST00000560424 HMOX1P09601 288 aa12.53□□□□□ -0.4
SMAD3-215ENST00000560424 GTF2E1P29083 439 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-215ENST00000560424 ALDH1B1P30837 517 aa12.53□□□□□ -0.4
SMAD3-215ENST00000560424 IL13P35225 146 aa12.53□□□□□ -0.4
SMAD3-215ENST00000560424 TPTE2Q6XPS3 522 aa12.53□□□□□ -0.4
SMAD3-215ENST00000560424 C7orf43Q8WVR3 580 aa12.53□□□□□ -0.4
SMAD3-215ENST00000560424 HEG1Q9ULI3 1381 aa12.53□□□□□ -0.4
SMAD3-215ENST00000560424 CAMTA2O94983 1202 aa12.52□□□□□ -0.41
SMAD3-215ENST00000560424 ZNF496Q96IT1 587 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-215ENST00000560424 FMNL2Q96PY5 1086 aa12.52□□□□□ -0.41
SMAD3-215ENST00000560424 TRPM7Q96QT4 1865 aa12.52□□□□□ -0.41
SMAD3-215ENST00000560424 A1BGP04217 495 aa12.51□□□□□ -0.41
SMAD3-215ENST00000560424 BRPF1P55201 1214 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-215ENST00000560424 FMR1Q06787 632 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMAD3-215ENST00000560424 MTHFSDQ2M296 383 aaKnown RBP12.51□□□□□ -0.41
SMAD3-215ENST00000560424 ZNF790Q6PG37 636 aa12.51□□□□□ -0.41
SMAD3-215ENST00000560424 OLFM4Q6UX06 510 aa12.51□□□□□ -0.41
SMAD3-215ENST00000560424 USP50Q70EL3 339 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-215ENST00000560424 PANK3Q9H999 370 aa12.51□□□□□ -0.41
SMAD3-215ENST00000560424 LTBP1Q14766 1721 aa12.51□□□□□ -0.41
SMAD3-215ENST00000560424 CASP8AP2Q9UKL3 1982 aa12.5□□□□□ -0.41
SMAD3-215ENST00000560424 FAM177BA6PVY3 158 aa12.5□□□□□ -0.41
SMAD3-215ENST00000560424 TRAF5O00463 557 aa12.5□□□□□ -0.41
SMAD3-215ENST00000560424 CELF2O95319 508 aaKnown RBP12.5□□□□□ -0.41
SMAD3-215ENST00000560424 EPS15P42566 896 aa12.5□□□□□ -0.41
SMAD3-215ENST00000560424 CST9Q5W186 159 aa12.5□□□□□ -0.41
SMAD3-215ENST00000560424 CLEC4GQ6UXB4 293 aa12.5□□□□□ -0.41
SMAD3-215ENST00000560424 PSMD1Q99460 953 aa12.5□□□□□ -0.41
SMAD3-215ENST00000560424 PDE4DIPQ5VU43 2346 aa12.5□□□□□ -0.41
SMAD3-215ENST00000560424 BCORQ6W2J9 1755 aa12.49□□□□□ -0.41
SMAD3-215ENST00000560424 SAPCD2Q86UD0 394 aa12.49□□□□□ -0.41
SMAD3-215ENST00000560424 LARGE2Q8N3Y3 721 aa12.49□□□□□ -0.41
SMAD3-215ENST00000560424 ZNF408Q9H9D4 720 aa12.49□□□□□ -0.41
SMAD3-215ENST00000560424 NIP7Q9Y221 180 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMAD3-215ENST00000560424 SCNN1DP51172 638 aa12.48□□□□□ -0.41
SMAD3-215ENST00000560424 SOX10P56693 466 aa12.48□□□□□ -0.41
SMAD3-215ENST00000560424 PRPF38BQ5VTL8 546 aaKnown RBP12.48□□□□□ -0.41
SMAD3-215ENST00000560424 CC2D2BQ6DHV5 1058 aa12.48□□□□□ -0.41
SMAD3-215ENST00000560424 CIAPIN1Q6FI81 312 aa12.48□□□□□ -0.41
SMAD3-215ENST00000560424 NIM1KQ8IY84 436 aa12.48□□□□□ -0.41
SMAD3-215ENST00000560424 TMX4Q9H1E5 349 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms