RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 C1orf141Q5JVX7 400 aa14.26□□□□□ -0.13
APH1B-208ENST00000560353 MAP1SQ66K74 1059 aaPredicted RBP14.26□□□□□ -0.13
APH1B-208ENST00000560353 CNKSR1Q969H4 720 aa14.26□□□□□ -0.13
APH1B-208ENST00000560353 CAPNS2Q96L46 248 aa14.26□□□□□ -0.13
APH1B-208ENST00000560353 GPR101Q96P66 508 aaPredicted RBP14.26□□□□□ -0.13
APH1B-208ENST00000560353 MCOLN1Q9GZU1 580 aa14.26□□□□□ -0.13
APH1B-208ENST00000560353 POLKQ9UBT6 870 aa14.26□□□□□ -0.13
APH1B-208ENST00000560353 SCN4AP35499 1836 aa14.26□□□□□ -0.13
APH1B-208ENST00000560353 KIF20BQ96Q89 1820 aa14.26□□□□□ -0.13
APH1B-208ENST00000560353 POTEHQ6S545 545 aa14.25□□□□□ -0.13
APH1B-208ENST00000560353 CARD14Q9BXL6 1004 aa14.25□□□□□ -0.13
APH1B-208ENST00000560353 PDE4DIPQ5VU43 2346 aa14.25□□□□□ -0.13
APH1B-208ENST00000560353 FER1L6Q2WGJ9 1857 aa14.25□□□□□ -0.13
APH1B-208ENST00000560353 TJP1Q07157 1748 aa14.24□□□□□ -0.13
APH1B-208ENST00000560353 CA12O43570 354 aa14.24□□□□□ -0.13
APH1B-208ENST00000560353 CDCA8Q53HL2 280 aa14.24□□□□□ -0.13
APH1B-208ENST00000560353 STYK1Q6J9G0 422 aa14.24□□□□□ -0.13
APH1B-208ENST00000560353 BICDL1Q6ZP65 573 aa14.24□□□□□ -0.13
APH1B-208ENST00000560353 PAXIP1Q6ZW49 1069 aaPredicted RBP14.24□□□□□ -0.13
APH1B-208ENST00000560353 DDX21Q9NR30 783 aaKnown RBP eCLIP14.24□□□□□ -0.13
APH1B-208ENST00000560353 ANKRD26Q9UPS8 1709 aa14.24□□□□□ -0.13
APH1B-208ENST00000560353 MAP2K2P36507 400 aa14.23□□□□□ -0.13
APH1B-208ENST00000560353 PRPF40BQ6NWY9 871 aaKnown RBP14.23□□□□□ -0.13
APH1B-208ENST00000560353 GRM1Q13255 1194 aa14.22□□□□□ -0.13
APH1B-208ENST00000560353 ZBTB1Q9Y2K1 713 aa14.22□□□□□ -0.13
APH1B-208ENST00000560353 A0A087WZG4 1122 aa14.21□□□□□ -0.13
APH1B-208ENST00000560353 PRR5LQ6MZQ0 368 aa14.21□□□□□ -0.13
APH1B-208ENST00000560353 CYP4F22Q6NT55 531 aa14.21□□□□□ -0.13
APH1B-208ENST00000560353 TSKSQ9UJT2 592 aa14.21□□□□□ -0.13
APH1B-208ENST00000560353 ZNF541Q9H0D2 1346 aa14.2□□□□□ -0.14
APH1B-208ENST00000560353 SRGNP10124 158 aa14.2□□□□□ -0.14
APH1B-208ENST00000560353 DGKZQ13574 1117 aa14.2□□□□□ -0.14
APH1B-208ENST00000560353 TBC1D9BQ66K14 1250 aa14.2□□□□□ -0.14
APH1B-208ENST00000560353 MASTLQ96GX5 879 aa14.2□□□□□ -0.14
APH1B-208ENST00000560353 ADAMTSL1Q8N6G6 1762 aa14.19□□□□□ -0.14
APH1B-208ENST00000560353 THSD7BQ9C0I4 1608 aa14.19□□□□□ -0.14
APH1B-208ENST00000560353 CANXP27824 592 aaKnown RBP14.19□□□□□ -0.14
APH1B-208ENST00000560353 CCDC93Q567U6 631 aa14.19□□□□□ -0.14
APH1B-208ENST00000560353 PRPF38BQ5VTL8 546 aaKnown RBP14.19□□□□□ -0.14
APH1B-208ENST00000560353 GPC2Q8N158 579 aa14.19□□□□□ -0.14
APH1B-208ENST00000560353 CCDC24Q8N4L8 307 aa14.19□□□□□ -0.14
APH1B-208ENST00000560353 C7orf43Q8WVR3 580 aa14.19□□□□□ -0.14
APH1B-208ENST00000560353 RNF123Q5XPI4 1314 aa14.18□□□□□ -0.14
APH1B-208ENST00000560353 NPHP1O15259 732 aa14.18□□□□□ -0.14
APH1B-208ENST00000560353 FKBP4Q02790 459 aaKnown RBP eCLIP14.18□□□□□ -0.14
APH1B-208ENST00000560353 VSIG10Q8N0Z9 540 aa14.18□□□□□ -0.14
APH1B-208ENST00000560353 SLC52A2Q9HAB3 445 aa14.18□□□□□ -0.14
APH1B-208ENST00000560353 FZD9O00144 591 aa14.17□□□□□ -0.14
APH1B-208ENST00000560353 AOC2O75106 756 aa14.17□□□□□ -0.14
APH1B-208ENST00000560353 STARD3NLO95772 234 aa14.17□□□□□ -0.14
APH1B-208ENST00000560353 EIF5P55010 431 aaKnown RBP14.17□□□□□ -0.14
APH1B-208ENST00000560353 ST5P78524 1137 aa14.17□□□□□ -0.14
APH1B-208ENST00000560353 CNBD1Q8NA66 436 aa14.17□□□□□ -0.14
APH1B-208ENST00000560353 ZNF277Q9NRM2 450 aaPredicted RBP14.17□□□□□ -0.14
APH1B-208ENST00000560353 TLL2Q9Y6L7 1015 aa14.17□□□□□ -0.14
APH1B-208ENST00000560353 ANKRD31Q8N7Z5 1873 aa14.16□□□□□ -0.14
APH1B-208ENST00000560353 PRR29P0C7W0 189 aa14.16□□□□□ -0.14
APH1B-208ENST00000560353 TNNT2P45379 298 aaPredicted RBP14.16□□□□□ -0.14
APH1B-208ENST00000560353 BRPF1P55201 1214 aaPredicted RBP14.16□□□□□ -0.14
APH1B-208ENST00000560353 CST9Q5W186 159 aa14.16□□□□□ -0.14
APH1B-208ENST00000560353 RTKN2Q8IZC4 609 aa14.16□□□□□ -0.14
APH1B-208ENST00000560353 SETDB2Q96T68 719 aa14.16□□□□□ -0.14
APH1B-208ENST00000560353 SLX4Q8IY92 1834 aa14.15□□□□□ -0.14
APH1B-208ENST00000560353 SLC39A6Q13433 755 aa14.15□□□□□ -0.14
APH1B-208ENST00000560353 AEBP1Q8IUX7 1158 aa14.15□□□□□ -0.14
APH1B-208ENST00000560353 COL11A2P13942 1736 aaPredicted RBP14.15□□□□□ -0.14
APH1B-208ENST00000560353 LMOD1P29536 600 aaPredicted RBP14.14□□□□□ -0.15
APH1B-208ENST00000560353 FMR1Q06787 632 aaKnown RBP eCLIP14.14□□□□□ -0.15
APH1B-208ENST00000560353 AKAP4Q5JQC9 854 aa14.14□□□□□ -0.15
APH1B-208ENST00000560353 LTBP1Q14766 1721 aa14.13□□□□□ -0.15
APH1B-208ENST00000560353 NPR1P16066 1061 aa14.13□□□□□ -0.15
APH1B-208ENST00000560353 IARSP41252 1262 aaKnown RBP14.13□□□□□ -0.15
APH1B-208ENST00000560353 JDP2Q8WYK2 163 aa14.13□□□□□ -0.15
APH1B-208ENST00000560353 HHIPL1Q96JK4 782 aa14.13□□□□□ -0.15
APH1B-208ENST00000560353 LGR6Q9HBX8 967 aa14.13□□□□□ -0.15
APH1B-208ENST00000560353 TBC1D2BQ9UPU7 963 aa14.13□□□□□ -0.15
APH1B-208ENST00000560353 TRAF5O00463 557 aa14.12□□□□□ -0.15
APH1B-208ENST00000560353 SOX10P56693 466 aa14.12□□□□□ -0.15
APH1B-208ENST00000560353 SULT6B1Q6IMI4 303 aa14.12□□□□□ -0.15
APH1B-208ENST00000560353 USP50Q70EL3 339 aaPredicted RBP14.12□□□□□ -0.15
APH1B-208ENST00000560353 SAPCD2Q86UD0 394 aa14.12□□□□□ -0.15
APH1B-208ENST00000560353 EIF6P56537 245 aaKnown RBP14.11□□□□□ -0.15
APH1B-208ENST00000560353 NPM2Q86SE8 214 aaKnown RBP14.11□□□□□ -0.15
APH1B-208ENST00000560353 SYNE4Q8N205 404 aa14.11□□□□□ -0.15
APH1B-208ENST00000560353 GJA3Q9Y6H8 435 aa14.11□□□□□ -0.15
APH1B-208ENST00000560353 SCN11AQ9UI33 1791 aa14.1□□□□□ -0.15
APH1B-208ENST00000560353 RNMTO43148 476 aaKnown RBP14.1□□□□□ -0.15
APH1B-208ENST00000560353 IL6STP40189 918 aaPredicted RBP14.1□□□□□ -0.15
APH1B-208ENST00000560353 CIAPIN1Q6FI81 312 aa14.1□□□□□ -0.15
APH1B-208ENST00000560353 TEX13AQ9BXU3 409 aaPredicted RBP14.1□□□□□ -0.15
APH1B-208ENST00000560353 ZNF330Q9Y3S2 320 aaPredicted RBP14.1□□□□□ -0.15
APH1B-208ENST00000560353 CASP8AP2Q9UKL3 1982 aa14.09□□□□□ -0.15
APH1B-208ENST00000560353 KLRG2A4D1S0 409 aaPredicted RBP14.09□□□□□ -0.15
APH1B-208ENST00000560353 EPS15P42566 896 aa14.09□□□□□ -0.15
APH1B-208ENST00000560353 NBPF5PQ86XG9 351 aaPredicted RBP14.09□□□□□ -0.15
APH1B-208ENST00000560353 ARFGEF2Q9Y6D5 1785 aa14.09□□□□□ -0.15
APH1B-208ENST00000560353 CELF2O95319 508 aaKnown RBP14.08□□□□□ -0.16
APH1B-208ENST00000560353 ALDH1B1P30837 517 aa14.08□□□□□ -0.16
APH1B-208ENST00000560353 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.16
APH1B-208ENST00000560353 SCNN1DP51172 638 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms