RNA–Protein interactions for RNA: ENST00000560273.2

TUBBP8-201, Transcript of tubulin beta class I pseudogene 8, humanhuman

BASIC

Gene TUBBP8, Length 1,232 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP8-201ENST00000560273 PROSER3Q2NL68 480 aa12.12□□□□□ -0.47
TUBBP8-201ENST00000560273 MSL1Q68DK7 614 aa12.12□□□□□ -0.47
TUBBP8-201ENST00000560273 KIF6Q6ZMV9 814 aa12.12□□□□□ -0.47
TUBBP8-201ENST00000560273 HYPKQ9NX55 129 aa12.12□□□□□ -0.47
TUBBP8-201ENST00000560273 TCERG1O14776 1098 aaKnown RBP12.11□□□□□ -0.47
TUBBP8-201ENST00000560273 AIMP1Q12904 312 aaKnown RBP12.11□□□□□ -0.47
TUBBP8-201ENST00000560273 COPS6Q7L5N1 327 aa12.11□□□□□ -0.47
TUBBP8-201ENST00000560273 CICQ96RK0 1608 aaPredicted RBP12.11□□□□□ -0.47
TUBBP8-201ENST00000560273 CAMTA2O94983 1202 aa12.1□□□□□ -0.47
TUBBP8-201ENST00000560273 ATXN8OSP0DMR3 200 aa12.1□□□□□ -0.47
TUBBP8-201ENST00000560273 FKBP8Q14318 412 aa12.1□□□□□ -0.47
TUBBP8-201ENST00000560273 TTLL7Q6ZT98 887 aa12.1□□□□□ -0.47
TUBBP8-201ENST00000560273 LRP10Q7Z4F1 713 aa12.1□□□□□ -0.47
TUBBP8-201ENST00000560273 XAGE3Q8WTP9 111 aa12.1□□□□□ -0.47
TUBBP8-201ENST00000560273 YTHDC1Q96MU7 727 aaKnown RBP12.1□□□□□ -0.47
TUBBP8-201ENST00000560273 ZNF652Q9Y2D9 606 aa12.1□□□□□ -0.47
TUBBP8-201ENST00000560273 ERVV-1B6SEH8 477 aa12.09□□□□□ -0.47
TUBBP8-201ENST00000560273 PTGER2P43116 358 aa12.09□□□□□ -0.47
TUBBP8-201ENST00000560273 CLEC4GQ6UXB4 293 aa12.09□□□□□ -0.47
TUBBP8-201ENST00000560273 ZBTB3Q9H5J0 574 aa12.09□□□□□ -0.47
TUBBP8-201ENST00000560273 BCL2L12Q9HB09 334 aa12.09□□□□□ -0.47
TUBBP8-201ENST00000560273 PPP1R1BQ9UD71 204 aaPredicted RBP12.09□□□□□ -0.47
TUBBP8-201ENST00000560273 TAF1LQ8IZX4 1826 aa12.09□□□□□ -0.47
TUBBP8-201ENST00000560273 MAP3K15Q6ZN16 1313 aa12.09□□□□□ -0.47
TUBBP8-201ENST00000560273 COL5A3P25940 1745 aaPredicted RBP12.08□□□□□ -0.47
TUBBP8-201ENST00000560273 RGL2O15211 777 aa12.08□□□□□ -0.48
TUBBP8-201ENST00000560273 MMP10P09238 476 aa12.08□□□□□ -0.48
TUBBP8-201ENST00000560273 CT47B1P0C2W7 299 aaPredicted RBP12.08□□□□□ -0.48
TUBBP8-201ENST00000560273 BICDL1Q6ZP65 573 aa12.08□□□□□ -0.48
TUBBP8-201ENST00000560273 ANKRD13DQ6ZTN6 518 aa12.08□□□□□ -0.48
TUBBP8-201ENST00000560273 ZNF428Q96B54 188 aa12.08□□□□□ -0.48
TUBBP8-201ENST00000560273 PHAXQ9H814 394 aaKnown RBP12.08□□□□□ -0.48
TUBBP8-201ENST00000560273 PARP3Q9Y6F1 533 aa12.08□□□□□ -0.48
TUBBP8-201ENST00000560273 DDX58O95786 925 aaKnown RBP12.07□□□□□ -0.48
TUBBP8-201ENST00000560273 TM4SF1P30408 202 aa12.07□□□□□ -0.48
TUBBP8-201ENST00000560273 NFIXQ14938 502 aa12.07□□□□□ -0.48
TUBBP8-201ENST00000560273 HLFQ16534 295 aa12.07□□□□□ -0.48
TUBBP8-201ENST00000560273 TBC1D9BQ66K14 1250 aa12.07□□□□□ -0.48
TUBBP8-201ENST00000560273 SETDB2Q96T68 719 aa12.07□□□□□ -0.48
TUBBP8-201ENST00000560273 SGIP1Q9BQI5 828 aa12.07□□□□□ -0.48
TUBBP8-201ENST00000560273 MYH14Q7Z406 1995 aaKnown RBP12.07□□□□□ -0.48
TUBBP8-201ENST00000560273 HSP90AB3PQ58FF7 597 aa12.06□□□□□ -0.48
TUBBP8-201ENST00000560273 RIC3Q7Z5B4 369 aa12.06□□□□□ -0.48
TUBBP8-201ENST00000560273 PLBD2Q8NHP8 589 aa12.06□□□□□ -0.48
TUBBP8-201ENST00000560273 NIP7Q9Y221 180 aaKnown RBP eCLIP12.06□□□□□ -0.48
TUBBP8-201ENST00000560273 ALDH1L2Q3SY69 923 aa12.05□□□□□ -0.48
TUBBP8-201ENST00000560273 GIGYF2Q6Y7W6 1299 aaKnown RBP12.05□□□□□ -0.48
TUBBP8-201ENST00000560273 G2E3Q7L622 706 aa12.05□□□□□ -0.48
TUBBP8-201ENST00000560273 UBR3Q6ZT12 1888 aa12.05□□□□□ -0.48
TUBBP8-201ENST00000560273 POLRMTO00411 1230 aaKnown RBP12.04□□□□□ -0.48
TUBBP8-201ENST00000560273 NPHP1O15259 732 aa12.04□□□□□ -0.48
TUBBP8-201ENST00000560273 SERPINB2P05120 415 aa12.04□□□□□ -0.48
TUBBP8-201ENST00000560273 YY1P25490 414 aa12.04□□□□□ -0.48
TUBBP8-201ENST00000560273 DDR1Q08345 913 aa12.04□□□□□ -0.48
TUBBP8-201ENST00000560273 FLIIQ13045 1269 aa12.04□□□□□ -0.48
TUBBP8-201ENST00000560273 FKBP5Q13451 457 aaPredicted RBP12.04□□□□□ -0.48
TUBBP8-201ENST00000560273 TCIRG1Q13488 830 aa12.04□□□□□ -0.48
TUBBP8-201ENST00000560273 KSR2Q6VAB6 950 aa12.04□□□□□ -0.48
TUBBP8-201ENST00000560273 KLHL34Q8N239 644 aa12.04□□□□□ -0.48
TUBBP8-201ENST00000560273 SSH1Q8WYL5 1049 aa12.04□□□□□ -0.48
TUBBP8-201ENST00000560273 CASZ1Q86V15 1759 aa12.03□□□□□ -0.48
TUBBP8-201ENST00000560273 PI4KAP2A4QPH2 592 aa12.03□□□□□ -0.48
TUBBP8-201ENST00000560273 GPTP24298 496 aa12.03□□□□□ -0.48
TUBBP8-201ENST00000560273 MRPL50Q8N5N7 158 aaKnown RBP12.03□□□□□ -0.48
TUBBP8-201ENST00000560273 PI4KAP1Q8N8J0 262 aa12.03□□□□□ -0.48
TUBBP8-201ENST00000560273 SMC4Q9NTJ3 1288 aa12.03□□□□□ -0.48
TUBBP8-201ENST00000560273 QSER1Q2KHR3 1735 aa12.03□□□□□ -0.48
TUBBP8-201ENST00000560273 FAM177BA6PVY3 158 aa12.02□□□□□ -0.49
TUBBP8-201ENST00000560273 GTF2E1P29083 439 aaPredicted RBP12.02□□□□□ -0.49
TUBBP8-201ENST00000560273 PARP10Q53GL7 1025 aa12.02□□□□□ -0.49
TUBBP8-201ENST00000560273 TPTE2Q6XPS3 522 aa12.02□□□□□ -0.49
TUBBP8-201ENST00000560273 NBPF5PQ86XG9 351 aaPredicted RBP12.02□□□□□ -0.49
TUBBP8-201ENST00000560273 ZNF34Q8IZ26 560 aa12.02□□□□□ -0.49
TUBBP8-201ENST00000560273 BCL2L13Q9BXK5 485 aa12.02□□□□□ -0.49
TUBBP8-201ENST00000560273 MAP3K2Q9Y2U5 619 aa12.02□□□□□ -0.49
TUBBP8-201ENST00000560273 CARMIL3Q8ND23 1372 aa12.02□□□□□ -0.49
TUBBP8-201ENST00000560273 LAMB4A4D0S4 1761 aa12.02□□□□□ -0.49
TUBBP8-201ENST00000560273 ATP5J2-PTCD1G3V325 749 aa12.01□□□□□ -0.49
TUBBP8-201ENST00000560273 RARSP54136 660 aaKnown RBP12.01□□□□□ -0.49
TUBBP8-201ENST00000560273 NEXNQ0ZGT2 675 aa12.01□□□□□ -0.49
TUBBP8-201ENST00000560273 POLA2Q14181 598 aa12.01□□□□□ -0.49
TUBBP8-201ENST00000560273 PPP1R42Q7Z4L9 355 aa12.01□□□□□ -0.49
TUBBP8-201ENST00000560273 CNBD1Q8NA66 436 aa12.01□□□□□ -0.49
TUBBP8-201ENST00000560273 MYD88Q99836 296 aa12.01□□□□□ -0.49
TUBBP8-201ENST00000560273 METTL22Q9BUU2 404 aaPredicted RBP12.01□□□□□ -0.49
TUBBP8-201ENST00000560273 FHDC1Q9C0D6 1143 aaPredicted RBP12.01□□□□□ -0.49
TUBBP8-201ENST00000560273 CD2APQ9Y5K6 639 aa12.01□□□□□ -0.49
TUBBP8-201ENST00000560273 TUBGCP6Q96RT7 1819 aa12□□□□□ -0.49
TUBBP8-201ENST00000560273 SUSD4Q5VX71 490 aa12□□□□□ -0.49
TUBBP8-201ENST00000560273 DNAAF4Q8WXU2 420 aa12□□□□□ -0.49
TUBBP8-201ENST00000560273 SYT17Q9BSW7 474 aa12□□□□□ -0.49
TUBBP8-201ENST00000560273 ISCA1Q9BUE6 129 aa12□□□□□ -0.49
TUBBP8-201ENST00000560273 UTP14AQ9BVJ6 771 aaKnown RBP12□□□□□ -0.49
TUBBP8-201ENST00000560273 NYXQ9GZU5 481 aa12□□□□□ -0.49
TUBBP8-201ENST00000560273 ATP10DQ9P241 1426 aa12□□□□□ -0.49
TUBBP8-201ENST00000560273 ST5P78524 1137 aa11.99□□□□□ -0.49
TUBBP8-201ENST00000560273 TRIM28Q13263 835 aaKnown RBP11.99□□□□□ -0.49
TUBBP8-201ENST00000560273 PRR5LQ6MZQ0 368 aa11.99□□□□□ -0.49
TUBBP8-201ENST00000560273 NLRP10Q86W26 655 aa11.99□□□□□ -0.49
TUBBP8-201ENST00000560273 NOB1Q9ULX3 412 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms