RNA–Protein interactions for RNA: ENST00000560213.1

LRRC28-217, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-217ENST00000560213 LRP5O75197 1615 aa21■□□□□ 0.95
LRRC28-217ENST00000560213 TCERG1O14776 1098 aaKnown RBP21■□□□□ 0.95
LRRC28-217ENST00000560213 MMP10P09238 476 aa21■□□□□ 0.95
LRRC28-217ENST00000560213 XAGE3Q8WTP9 111 aa21■□□□□ 0.95
LRRC28-217ENST00000560213 ZNF652Q9Y2D9 606 aa21■□□□□ 0.95
LRRC28-217ENST00000560213 CLEC4GQ6UXB4 293 aa20.99■□□□□ 0.95
LRRC28-217ENST00000560213 MAP3K15Q6ZN16 1313 aa20.99■□□□□ 0.95
LRRC28-217ENST00000560213 ERVV-1B6SEH8 477 aa20.98■□□□□ 0.95
LRRC28-217ENST00000560213 BICDL1Q6ZP65 573 aa20.98■□□□□ 0.95
LRRC28-217ENST00000560213 PARP3Q9Y6F1 533 aa20.98■□□□□ 0.95
LRRC28-217ENST00000560213 BCORQ6W2J9 1755 aa20.97■□□□□ 0.95
LRRC28-217ENST00000560213 SCN7AQ01118 1682 aa20.97■□□□□ 0.95
LRRC28-217ENST00000560213 RGL2O15211 777 aa20.97■□□□□ 0.95
LRRC28-217ENST00000560213 TM4SF1P30408 202 aa20.97■□□□□ 0.95
LRRC28-217ENST00000560213 NFIXQ14938 502 aa20.97■□□□□ 0.95
LRRC28-217ENST00000560213 ZBTB3Q9H5J0 574 aa20.97■□□□□ 0.95
LRRC28-217ENST00000560213 SLC4A2P04920 1241 aa20.96■□□□□ 0.95
LRRC28-217ENST00000560213 HLFQ16534 295 aa20.96■□□□□ 0.95
LRRC28-217ENST00000560213 TBC1D9BQ66K14 1250 aa20.96■□□□□ 0.95
LRRC28-217ENST00000560213 PHAXQ9H814 394 aaKnown RBP20.96■□□□□ 0.95
LRRC28-217ENST00000560213 SETDB2Q96T68 719 aa20.95■□□□□ 0.94
LRRC28-217ENST00000560213 CACNA1FO60840 1977 aa20.95■□□□□ 0.94
LRRC28-217ENST00000560213 NUP98P52948 1817 aa20.94■□□□□ 0.94
LRRC28-217ENST00000560213 ANKRD13DQ6ZTN6 518 aa20.94■□□□□ 0.94
LRRC28-217ENST00000560213 KLHL34Q8N239 644 aa20.94■□□□□ 0.94
LRRC28-217ENST00000560213 DDR1Q08345 913 aa20.93■□□□□ 0.94
LRRC28-217ENST00000560213 GIGYF2Q6Y7W6 1299 aaKnown RBP20.93■□□□□ 0.94
LRRC28-217ENST00000560213 PLBD2Q8NHP8 589 aa20.93■□□□□ 0.94
LRRC28-217ENST00000560213 POLRMTO00411 1230 aaKnown RBP20.92■□□□□ 0.94
LRRC28-217ENST00000560213 SERPINB2P05120 415 aa20.92■□□□□ 0.94
LRRC28-217ENST00000560213 CT47B1P0C2W7 299 aaPredicted RBP20.92■□□□□ 0.94
LRRC28-217ENST00000560213 ZNF428Q96B54 188 aa20.92■□□□□ 0.94
LRRC28-217ENST00000560213 NIP7Q9Y221 180 aaKnown RBP eCLIP20.92■□□□□ 0.94
LRRC28-217ENST00000560213 DDX58O95786 925 aaKnown RBP20.91■□□□□ 0.94
LRRC28-217ENST00000560213 RIC3Q7Z5B4 369 aa20.91■□□□□ 0.94
LRRC28-217ENST00000560213 HSP90AB3PQ58FF7 597 aa20.9■□□□□ 0.94
LRRC28-217ENST00000560213 G2E3Q7L622 706 aa20.9■□□□□ 0.94
LRRC28-217ENST00000560213 YTHDC1Q96MU7 727 aaKnown RBP20.9■□□□□ 0.94
LRRC28-217ENST00000560213 FHDC1Q9C0D6 1143 aaPredicted RBP20.9■□□□□ 0.94
LRRC28-217ENST00000560213 CARMIL3Q8ND23 1372 aa20.89■□□□□ 0.93
LRRC28-217ENST00000560213 NPHP1O15259 732 aa20.89■□□□□ 0.93
LRRC28-217ENST00000560213 GPTP24298 496 aa20.88■□□□□ 0.93
LRRC28-217ENST00000560213 FLIIQ13045 1269 aa20.88■□□□□ 0.93
LRRC28-217ENST00000560213 TCIRG1Q13488 830 aa20.88■□□□□ 0.93
LRRC28-217ENST00000560213 ZNF34Q8IZ26 560 aa20.88■□□□□ 0.93
LRRC28-217ENST00000560213 AFDNP55196 1824 aaKnown RBP20.88■□□□□ 0.93
LRRC28-217ENST00000560213 FKBP5Q13451 457 aaPredicted RBP20.87■□□□□ 0.93
LRRC28-217ENST00000560213 ALDH1L2Q3SY69 923 aa20.87■□□□□ 0.93
LRRC28-217ENST00000560213 KSR2Q6VAB6 950 aa20.87■□□□□ 0.93
LRRC28-217ENST00000560213 NBPF5PQ86XG9 351 aaPredicted RBP20.87■□□□□ 0.93
LRRC28-217ENST00000560213 SSH1Q8WYL5 1049 aa20.87■□□□□ 0.93
LRRC28-217ENST00000560213 SYT17Q9BSW7 474 aa20.87■□□□□ 0.93
LRRC28-217ENST00000560213 CD2APQ9Y5K6 639 aa20.87■□□□□ 0.93
LRRC28-217ENST00000560213 ATP10DQ9P241 1426 aa20.87■□□□□ 0.93
LRRC28-217ENST00000560213 FAM177BA6PVY3 158 aa20.86■□□□□ 0.93
LRRC28-217ENST00000560213 PI4KAP2A4QPH2 592 aa20.85■□□□□ 0.93
LRRC28-217ENST00000560213 PARP10Q53GL7 1025 aa20.85■□□□□ 0.93
LRRC28-217ENST00000560213 TPTE2Q6XPS3 522 aa20.85■□□□□ 0.93
LRRC28-217ENST00000560213 MRPL50Q8N5N7 158 aaKnown RBP20.85■□□□□ 0.93
LRRC28-217ENST00000560213 PI4KAP1Q8N8J0 262 aa20.85■□□□□ 0.93
LRRC28-217ENST00000560213 CNBD1Q8NA66 436 aa20.85■□□□□ 0.93
LRRC28-217ENST00000560213 MAP3K2Q9Y2U5 619 aa20.85■□□□□ 0.93
LRRC28-217ENST00000560213 ARFGEF2Q9Y6D5 1785 aa20.85■□□□□ 0.93
LRRC28-217ENST00000560213 GTF2E1P29083 439 aaPredicted RBP20.84■□□□□ 0.93
LRRC28-217ENST00000560213 PPP1R42Q7Z4L9 355 aa20.84■□□□□ 0.93
LRRC28-217ENST00000560213 BCL2L13Q9BXK5 485 aa20.84■□□□□ 0.93
LRRC28-217ENST00000560213 NYXQ9GZU5 481 aa20.84■□□□□ 0.93
LRRC28-217ENST00000560213 SMC4Q9NTJ3 1288 aa20.84■□□□□ 0.93
LRRC28-217ENST00000560213 ANKRD36CQ5JPF3 1778 aa20.84■□□□□ 0.93
LRRC28-217ENST00000560213 UBN2Q6ZU65 1347 aa20.83■□□□□ 0.93
LRRC28-217ENST00000560213 ST5P78524 1137 aa20.83■□□□□ 0.93
LRRC28-217ENST00000560213 SUSD4Q5VX71 490 aa20.83■□□□□ 0.93
LRRC28-217ENST00000560213 PRR5LQ6MZQ0 368 aa20.83■□□□□ 0.93
LRRC28-217ENST00000560213 MYD88Q99836 296 aa20.83■□□□□ 0.93
LRRC28-217ENST00000560213 METTL22Q9BUU2 404 aaPredicted RBP20.83■□□□□ 0.93
LRRC28-217ENST00000560213 NRXN2Q9P2S2 1712 aa20.83■□□□□ 0.92
LRRC28-217ENST00000560213 C10orf71Q711Q0 1435 aa20.82■□□□□ 0.92
LRRC28-217ENST00000560213 ATP5J2-PTCD1G3V325 749 aa20.82■□□□□ 0.92
LRRC28-217ENST00000560213 NEXNQ0ZGT2 675 aa20.82■□□□□ 0.92
LRRC28-217ENST00000560213 ISCA1Q9BUE6 129 aa20.82■□□□□ 0.92
LRRC28-217ENST00000560213 ADCY9O60503 1353 aa20.82■□□□□ 0.92
LRRC28-217ENST00000560213 RARSP54136 660 aaKnown RBP20.81■□□□□ 0.92
LRRC28-217ENST00000560213 NLRP10Q86W26 655 aa20.81■□□□□ 0.92
LRRC28-217ENST00000560213 CCDC24Q8N4L8 307 aa20.81■□□□□ 0.92
LRRC28-217ENST00000560213 UTP14AQ9BVJ6 771 aaKnown RBP20.81■□□□□ 0.92
LRRC28-217ENST00000560213 KIF13BQ9NQT8 1826 aa20.81■□□□□ 0.92
LRRC28-217ENST00000560213 TGFB2P61812 414 aa20.8■□□□□ 0.92
LRRC28-217ENST00000560213 NLGN2Q8NFZ4 835 aa20.8■□□□□ 0.92
LRRC28-217ENST00000560213 DNAAF4Q8WXU2 420 aa20.8■□□□□ 0.92
LRRC28-217ENST00000560213 TRIM28Q13263 835 aaKnown RBP20.79■□□□□ 0.92
LRRC28-217ENST00000560213 NUTM1Q86Y26 1132 aa20.79■□□□□ 0.92
LRRC28-217ENST00000560213 BRIP1Q9BX63 1249 aa20.79■□□□□ 0.92
LRRC28-217ENST00000560213 PTPRCP08575 1304 aa20.78■□□□□ 0.92
LRRC28-217ENST00000560213 IBTKQ9P2D0 1353 aaPredicted RBP20.78■□□□□ 0.92
LRRC28-217ENST00000560213 F6X3S4 739 aa20.78■□□□□ 0.92
LRRC28-217ENST00000560213 NTSR2O95665 410 aa20.78■□□□□ 0.92
LRRC28-217ENST00000560213 PDE6BP35913 854 aa20.78■□□□□ 0.92
LRRC28-217ENST00000560213 TRMT112Q9UI30 125 aaKnown RBP20.78■□□□□ 0.92
LRRC28-217ENST00000560213 BRPF1P55201 1214 aaPredicted RBP20.77■□□□□ 0.92
LRRC28-217ENST00000560213 ERFEQ4G0M1 354 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms