RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 KCNA3P22001 575 aa19.34■□□□□ 0.69
RABGGTA-211ENST00000559850 PDIA6Q15084 440 aa19.34■□□□□ 0.69
RABGGTA-211ENST00000559850 SETDB2Q96T68 719 aa19.34■□□□□ 0.69
RABGGTA-211ENST00000559850 ZBTB3Q9H5J0 574 aa19.34■□□□□ 0.69
RABGGTA-211ENST00000559850 BCS1LQ9Y276 419 aa19.34■□□□□ 0.69
RABGGTA-211ENST00000559850 ARFGEF1Q9Y6D6 1849 aa19.33■□□□□ 0.69
RABGGTA-211ENST00000559850 FAM177BA6PVY3 158 aa19.33■□□□□ 0.68
RABGGTA-211ENST00000559850 PRR5LQ6MZQ0 368 aa19.33■□□□□ 0.68
RABGGTA-211ENST00000559850 IFT57Q9NWB7 429 aa19.33■□□□□ 0.68
RABGGTA-211ENST00000559850 GRIN3BO60391 1043 aa19.32■□□□□ 0.68
RABGGTA-211ENST00000559850 KIF6Q6ZMV9 814 aa19.32■□□□□ 0.68
RABGGTA-211ENST00000559850 ERBB4Q15303 1308 aa19.31■□□□□ 0.68
RABGGTA-211ENST00000559850 MAP3K15Q6ZN16 1313 aa19.31■□□□□ 0.68
RABGGTA-211ENST00000559850 ELL2O00472 640 aaPredicted RBP19.31■□□□□ 0.68
RABGGTA-211ENST00000559850 GNAI1P63096 354 aa19.31■□□□□ 0.68
RABGGTA-211ENST00000559850 DUSP27Q5VZP5 1158 aa19.31■□□□□ 0.68
RABGGTA-211ENST00000559850 LRP10Q7Z4F1 713 aa19.31■□□□□ 0.68
RABGGTA-211ENST00000559850 WWC1Q8IX03 1113 aa19.31■□□□□ 0.68
RABGGTA-211ENST00000559850 NIP7Q9Y221 180 aaKnown RBP eCLIP19.31■□□□□ 0.68
RABGGTA-211ENST00000559850 ZNF652Q9Y2D9 606 aa19.31■□□□□ 0.68
RABGGTA-211ENST00000559850 GOLGB1Q14789 3259 aaKnown RBP19.31■□□□□ 0.68
RABGGTA-211ENST00000559850 ANKRD36CQ5JPF3 1778 aa19.3■□□□□ 0.68
RABGGTA-211ENST00000559850 CALD1Q05682 793 aaKnown RBP19.3■□□□□ 0.68
RABGGTA-211ENST00000559850 HDGFL1Q5TGJ6 251 aa19.3■□□□□ 0.68
RABGGTA-211ENST00000559850 CLEC4GQ6UXB4 293 aa19.3■□□□□ 0.68
RABGGTA-211ENST00000559850 C2CD5Q86YS7 1000 aa19.3■□□□□ 0.68
RABGGTA-211ENST00000559850 TSR2Q969E8 191 aaKnown RBP19.3■□□□□ 0.68
RABGGTA-211ENST00000559850 CHPF2Q9P2E5 772 aa19.3■□□□□ 0.68
RABGGTA-211ENST00000559850 UTRNP46939 3433 aa19.3■□□□□ 0.68
RABGGTA-211ENST00000559850 NPHP1O15259 732 aa19.29■□□□□ 0.68
RABGGTA-211ENST00000559850 AIMP1Q12904 312 aaKnown RBP19.29■□□□□ 0.68
RABGGTA-211ENST00000559850 CNBD1Q8NA66 436 aa19.29■□□□□ 0.68
RABGGTA-211ENST00000559850 PIM2Q9P1W9 311 aa19.29■□□□□ 0.68
RABGGTA-211ENST00000559850 TNRC6CQ9HCJ0 1690 aaKnown RBP19.28■□□□□ 0.68
RABGGTA-211ENST00000559850 GPTP24298 496 aa19.28■□□□□ 0.68
RABGGTA-211ENST00000559850 CCDC27Q2M243 656 aa19.28■□□□□ 0.68
RABGGTA-211ENST00000559850 NBPF5PQ86XG9 351 aaPredicted RBP19.28■□□□□ 0.68
RABGGTA-211ENST00000559850 C8orf58Q8NAV2 365 aa19.28■□□□□ 0.68
RABGGTA-211ENST00000559850 COPS6Q7L5N1 327 aa19.27■□□□□ 0.68
RABGGTA-211ENST00000559850 XAGE3Q8WTP9 111 aa19.27■□□□□ 0.68
RABGGTA-211ENST00000559850 ERVV-1B6SEH8 477 aa19.26■□□□□ 0.67
RABGGTA-211ENST00000559850 DALRD3Q5D0E6 543 aaKnown RBP19.26■□□□□ 0.67
RABGGTA-211ENST00000559850 DDX21Q9NR30 783 aaKnown RBP eCLIP19.26■□□□□ 0.67
RABGGTA-211ENST00000559850 UBN2Q6ZU65 1347 aa19.25■□□□□ 0.67
RABGGTA-211ENST00000559850 ST5P78524 1137 aa19.25■□□□□ 0.67
RABGGTA-211ENST00000559850 ARHGAP27Q6ZUM4 889 aa19.25■□□□□ 0.67
RABGGTA-211ENST00000559850 TSPYL6Q8N831 410 aa19.25■□□□□ 0.67
RABGGTA-211ENST00000559850 BRIP1Q9BX63 1249 aa19.25■□□□□ 0.67
RABGGTA-211ENST00000559850 ATP10DQ9P241 1426 aa19.25■□□□□ 0.67
RABGGTA-211ENST00000559850 ARFGEF2Q9Y6D5 1785 aa19.24■□□□□ 0.67
RABGGTA-211ENST00000559850 H0YIN7 160 aa19.24■□□□□ 0.67
RABGGTA-211ENST00000559850 HOXB7P09629 217 aa19.24■□□□□ 0.67
RABGGTA-211ENST00000559850 NUTM1Q86Y26 1132 aa19.24■□□□□ 0.67
RABGGTA-211ENST00000559850 ZNF622Q969S3 477 aaKnown RBP eCLIP19.24■□□□□ 0.67
RABGGTA-211ENST00000559850 ZNF428Q96B54 188 aa19.24■□□□□ 0.67
RABGGTA-211ENST00000559850 RGL2O15211 777 aa19.23■□□□□ 0.67
RABGGTA-211ENST00000559850 PDE6BP35913 854 aa19.23■□□□□ 0.67
RABGGTA-211ENST00000559850 GIGYF2Q6Y7W6 1299 aaKnown RBP19.23■□□□□ 0.67
RABGGTA-211ENST00000559850 SLX4Q8IY92 1834 aa19.23■□□□□ 0.67
RABGGTA-211ENST00000559850 ABCC12Q96J65 1359 aa19.22■□□□□ 0.67
RABGGTA-211ENST00000559850 TCERG1O14776 1098 aaKnown RBP19.22■□□□□ 0.67
RABGGTA-211ENST00000559850 SUSD4Q5VX71 490 aa19.22■□□□□ 0.67
RABGGTA-211ENST00000559850 TPTE2Q6XPS3 522 aa19.22■□□□□ 0.67
RABGGTA-211ENST00000559850 ZNF34Q8IZ26 560 aa19.22■□□□□ 0.67
RABGGTA-211ENST00000559850 ZNF219Q9P2Y4 722 aaPredicted RBP19.22■□□□□ 0.67
RABGGTA-211ENST00000559850 GTF2E1P29083 439 aaPredicted RBP19.21■□□□□ 0.67
RABGGTA-211ENST00000559850 ERFEQ4G0M1 354 aa19.21■□□□□ 0.67
RABGGTA-211ENST00000559850 ZNF784Q8NCA9 323 aaPredicted RBP19.21■□□□□ 0.67
RABGGTA-211ENST00000559850 SPINK5Q9NQ38 1064 aaPredicted RBP19.21■□□□□ 0.67
RABGGTA-211ENST00000559850 DBF4Q9UBU7 674 aaPredicted RBP19.21■□□□□ 0.67
RABGGTA-211ENST00000559850 SBF1O95248 1867 aa19.2■□□□□ 0.66
RABGGTA-211ENST00000559850 CCDC88AQ3V6T2 1871 aa19.2■□□□□ 0.66
RABGGTA-211ENST00000559850 TTLL6Q8N841 843 aa19.2■□□□□ 0.66
RABGGTA-211ENST00000559850 PHAXQ9H814 394 aaKnown RBP19.2■□□□□ 0.66
RABGGTA-211ENST00000559850 IL16Q14005 1332 aa19.2■□□□□ 0.66
RABGGTA-211ENST00000559850 FANCIQ9NVI1 1328 aa19.2■□□□□ 0.66
RABGGTA-211ENST00000559850 LAMB2P55268 1798 aa19.19■□□□□ 0.66
RABGGTA-211ENST00000559850 NCBP3Q53F19 620 aaKnown RBP19.19■□□□□ 0.66
RABGGTA-211ENST00000559850 NTSR2O95665 410 aa19.18■□□□□ 0.66
RABGGTA-211ENST00000559850 SRGNP10124 158 aa19.18■□□□□ 0.66
RABGGTA-211ENST00000559850 WDR63Q8IWG1 891 aa19.18■□□□□ 0.66
RABGGTA-211ENST00000559850 HYPKQ9NX55 129 aa19.18■□□□□ 0.66
RABGGTA-211ENST00000559850 RASSF7Q02833 373 aa19.17■□□□□ 0.66
RABGGTA-211ENST00000559850 TWISTNBQ3B726 338 aaPredicted RBP19.17■□□□□ 0.66
RABGGTA-211ENST00000559850 NYXQ9GZU5 481 aa19.17■□□□□ 0.66
RABGGTA-211ENST00000559850 C21orf2O43822 256 aa19.16■□□□□ 0.66
RABGGTA-211ENST00000559850 DIEXFQ68CQ4 756 aaKnown RBP19.16■□□□□ 0.66
RABGGTA-211ENST00000559850 ANKRD13DQ6ZTN6 518 aa19.16■□□□□ 0.66
RABGGTA-211ENST00000559850 PLBD2Q8NHP8 589 aa19.16■□□□□ 0.66
RABGGTA-211ENST00000559850 ADCY9O60503 1353 aa19.16■□□□□ 0.66
RABGGTA-211ENST00000559850 FER1L6Q2WGJ9 1857 aa19.16■□□□□ 0.66
RABGGTA-211ENST00000559850 ATP5J2-PTCD1G3V325 749 aa19.15■□□□□ 0.66
RABGGTA-211ENST00000559850 CCER2I3L3R5 266 aa19.15■□□□□ 0.66
RABGGTA-211ENST00000559850 EXOSC9Q06265 439 aaKnown RBP19.15■□□□□ 0.66
RABGGTA-211ENST00000559850 TCIRG1Q13488 830 aa19.15■□□□□ 0.66
RABGGTA-211ENST00000559850 PARP10Q53GL7 1025 aa19.15■□□□□ 0.66
RABGGTA-211ENST00000559850 CCDC30Q5VVM6 783 aa19.15■□□□□ 0.66
RABGGTA-211ENST00000559850 STYK1Q6J9G0 422 aa19.15■□□□□ 0.66
RABGGTA-211ENST00000559850 C3orf67Q6ZVT6 689 aa19.15■□□□□ 0.66
RABGGTA-211ENST00000559850 NLRP10Q86W26 655 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms