RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 AMIGO3Q86WK7 504 aa11.07□□□□□ -0.64
LRRC28-215ENST00000559774 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.07□□□□□ -0.64
LRRC28-215ENST00000559774 API5Q9BZZ5 524 aaKnown RBP11.07□□□□□ -0.64
LRRC28-215ENST00000559774 PHAXQ9H814 394 aaKnown RBP11.07□□□□□ -0.64
LRRC28-215ENST00000559774 ZNF330Q9Y3S2 320 aaPredicted RBP11.07□□□□□ -0.64
LRRC28-215ENST00000559774 MYH14Q7Z406 1995 aaKnown RBP11.07□□□□□ -0.64
LRRC28-215ENST00000559774 QSER1Q2KHR3 1735 aa11.06□□□□□ -0.64
LRRC28-215ENST00000559774 ANXA1P04083 346 aa11.06□□□□□ -0.64
LRRC28-215ENST00000559774 AIMP1Q12904 312 aaKnown RBP11.06□□□□□ -0.64
LRRC28-215ENST00000559774 TRIM28Q13263 835 aaKnown RBP11.06□□□□□ -0.64
LRRC28-215ENST00000559774 FKBP5Q13451 457 aaPredicted RBP11.06□□□□□ -0.64
LRRC28-215ENST00000559774 TTLL7Q6ZT98 887 aa11.06□□□□□ -0.64
LRRC28-215ENST00000559774 RIC3Q7Z5B4 369 aa11.06□□□□□ -0.64
LRRC28-215ENST00000559774 TBC1D2BQ9UPU7 963 aa11.06□□□□□ -0.64
LRRC28-215ENST00000559774 UBR3Q6ZT12 1888 aa11.06□□□□□ -0.64
LRRC28-215ENST00000559774 PI4KAP2A4QPH2 592 aa11.05□□□□□ -0.64
LRRC28-215ENST00000559774 TCERG1O14776 1098 aaKnown RBP11.05□□□□□ -0.64
LRRC28-215ENST00000559774 BCAR3O75815 825 aa11.05□□□□□ -0.64
LRRC28-215ENST00000559774 CENPBP07199 599 aaPredicted RBP11.05□□□□□ -0.64
LRRC28-215ENST00000559774 GYS1P13807 737 aa11.05□□□□□ -0.64
LRRC28-215ENST00000559774 NEXNQ0ZGT2 675 aa11.05□□□□□ -0.64
LRRC28-215ENST00000559774 TCIRG1Q13488 830 aa11.05□□□□□ -0.64
LRRC28-215ENST00000559774 R3HDM1Q15032 1099 aaKnown RBP11.05□□□□□ -0.64
LRRC28-215ENST00000559774 USPL1Q5W0Q7 1092 aa11.05□□□□□ -0.64
LRRC28-215ENST00000559774 G2E3Q7L622 706 aa11.05□□□□□ -0.64
LRRC28-215ENST00000559774 PI4KAP1Q8N8J0 262 aa11.05□□□□□ -0.64
LRRC28-215ENST00000559774 METTL22Q9BUU2 404 aaPredicted RBP11.05□□□□□ -0.64
LRRC28-215ENST00000559774 MTFR1LQ9H019 292 aa11.05□□□□□ -0.64
LRRC28-215ENST00000559774 CACNA1FO60840 1977 aa11.05□□□□□ -0.64
LRRC28-215ENST00000559774 ATP10DQ9P241 1426 aa11.04□□□□□ -0.64
LRRC28-215ENST00000559774 TM4SF1P30408 202 aa11.04□□□□□ -0.64
LRRC28-215ENST00000559774 PARP10Q53GL7 1025 aa11.04□□□□□ -0.64
LRRC28-215ENST00000559774 ZKSCAN2Q63HK3 967 aa11.04□□□□□ -0.64
LRRC28-215ENST00000559774 ATF7IPQ6VMQ6 1270 aa11.04□□□□□ -0.64
LRRC28-215ENST00000559774 DNAAF4Q8WXU2 420 aa11.04□□□□□ -0.64
LRRC28-215ENST00000559774 ARXQ96QS3 562 aa11.04□□□□□ -0.64
LRRC28-215ENST00000559774 BCL2L13Q9BXK5 485 aa11.04□□□□□ -0.64
LRRC28-215ENST00000559774 BCL2L12Q9HB09 334 aa11.04□□□□□ -0.64
LRRC28-215ENST00000559774 NOB1Q9ULX3 412 aaKnown RBP11.04□□□□□ -0.64
LRRC28-215ENST00000559774 MAP3K2Q9Y2U5 619 aa11.04□□□□□ -0.64
LRRC28-215ENST00000559774 RNF123Q5XPI4 1314 aa11.04□□□□□ -0.64
LRRC28-215ENST00000559774 ADCY9O60503 1353 aa11.03□□□□□ -0.64
LRRC28-215ENST00000559774 ZNF34Q8IZ26 560 aa11.03□□□□□ -0.64
LRRC28-215ENST00000559774 LINS1Q8NG48 757 aa11.03□□□□□ -0.64
LRRC28-215ENST00000559774 SETDB2Q96T68 719 aa11.03□□□□□ -0.64
LRRC28-215ENST00000559774 ZBTB3Q9H5J0 574 aa11.03□□□□□ -0.64
LRRC28-215ENST00000559774 PXDNLA1KZ92 1463 aa11.02□□□□□ -0.65
LRRC28-215ENST00000559774 ALDH1L1O75891 902 aa11.02□□□□□ -0.65
LRRC28-215ENST00000559774 CCT4P50991 539 aaKnown RBP11.02□□□□□ -0.65
LRRC28-215ENST00000559774 FKBP8Q14318 412 aa11.02□□□□□ -0.65
LRRC28-215ENST00000559774 PDE3AQ14432 1141 aa11.02□□□□□ -0.65
LRRC28-215ENST00000559774 HLFQ16534 295 aa11.02□□□□□ -0.65
LRRC28-215ENST00000559774 CCDC191Q8NCU4 936 aa11.02□□□□□ -0.65
LRRC28-215ENST00000559774 ISCA1Q9BUE6 129 aa11.02□□□□□ -0.65
LRRC28-215ENST00000559774 SRP68Q9UHB9 627 aaKnown RBP11.02□□□□□ -0.65
LRRC28-215ENST00000559774 TRIM27P14373 513 aa11.01□□□□□ -0.65
LRRC28-215ENST00000559774 HSP90B1P14625 803 aaKnown RBP11.01□□□□□ -0.65
LRRC28-215ENST00000559774 BEND3Q5T5X7 828 aa11.01□□□□□ -0.65
LRRC28-215ENST00000559774 INTS3Q68E01 1043 aaKnown RBP11.01□□□□□ -0.65
LRRC28-215ENST00000559774 SMIM5Q71RC9 77 aa11.01□□□□□ -0.65
LRRC28-215ENST00000559774 PPP1R42Q7Z4L9 355 aa11.01□□□□□ -0.65
LRRC28-215ENST00000559774 FRAT1Q92837 279 aaPredicted RBP11.01□□□□□ -0.65
LRRC28-215ENST00000559774 NYXQ9GZU5 481 aa11.01□□□□□ -0.65
LRRC28-215ENST00000559774 NIP7Q9Y221 180 aaKnown RBP eCLIP11.01□□□□□ -0.65
LRRC28-215ENST00000559774 ABCC4O15439 1325 aa11.01□□□□□ -0.65
LRRC28-215ENST00000559774 CARMIL3Q8ND23 1372 aa11.01□□□□□ -0.65
LRRC28-215ENST00000559774 POLD1P28340 1107 aa11□□□□□ -0.65
LRRC28-215ENST00000559774 NFIXQ14938 502 aa11□□□□□ -0.65
LRRC28-215ENST00000559774 TBC1D9BQ66K14 1250 aa11□□□□□ -0.65
LRRC28-215ENST00000559774 TPTE2Q6XPS3 522 aa11□□□□□ -0.65
LRRC28-215ENST00000559774 NLRP10Q86W26 655 aa11□□□□□ -0.65
LRRC28-215ENST00000559774 DZIP1LQ8IYY4 767 aaKnown RBP11□□□□□ -0.65
LRRC28-215ENST00000559774 MYD88Q99836 296 aa11□□□□□ -0.65
LRRC28-215ENST00000559774 SRCIN1Q9C0H9 1055 aa11□□□□□ -0.65
LRRC28-215ENST00000559774 CHMP4BQ9H444 224 aaKnown RBP11□□□□□ -0.65
LRRC28-215ENST00000559774 HDAC5Q9UQL6 1122 aa11□□□□□ -0.65
LRRC28-215ENST00000559774 SCN7AQ01118 1682 aa11□□□□□ -0.65
LRRC28-215ENST00000559774 C4AP0C0L4 1744 aa10.99□□□□□ -0.65
LRRC28-215ENST00000559774 PSDA5PKW4 1024 aaPredicted RBP10.99□□□□□ -0.65
LRRC28-215ENST00000559774 NEURL1BA8MQ27 555 aa10.99□□□□□ -0.65
LRRC28-215ENST00000559774 F6X3S4 739 aa10.99□□□□□ -0.65
LRRC28-215ENST00000559774 IGKV5-2P06315 115 aa10.99□□□□□ -0.65
LRRC28-215ENST00000559774 FTSJ3Q8IY81 847 aaKnown RBP10.99□□□□□ -0.65
LRRC28-215ENST00000559774 PDGFDQ9GZP0 370 aaPredicted RBP10.99□□□□□ -0.65
LRRC28-215ENST00000559774 SPON1Q9HCB6 807 aa10.99□□□□□ -0.65
LRRC28-215ENST00000559774 CWC25Q9NXE8 425 aaPredicted RBP10.99□□□□□ -0.65
LRRC28-215ENST00000559774 PARP3Q9Y6F1 533 aa10.99□□□□□ -0.65
LRRC28-215ENST00000559774 BCORQ6W2J9 1755 aa10.98□□□□□ -0.65
LRRC28-215ENST00000559774 CASZ1Q86V15 1759 aa10.98□□□□□ -0.65
LRRC28-215ENST00000559774 POLRMTO00411 1230 aaKnown RBP10.98□□□□□ -0.65
LRRC28-215ENST00000559774 MMP10P09238 476 aa10.98□□□□□ -0.65
LRRC28-215ENST00000559774 RRP1P56182 461 aaKnown RBP10.98□□□□□ -0.65
LRRC28-215ENST00000559774 GCKRQ14397 625 aa10.98□□□□□ -0.65
LRRC28-215ENST00000559774 ZBTB38Q8NAP3 1195 aaPredicted RBP10.98□□□□□ -0.65
LRRC28-215ENST00000559774 SGIP1Q9BQI5 828 aa10.98□□□□□ -0.65
LRRC28-215ENST00000559774 UTP14AQ9BVJ6 771 aaKnown RBP10.98□□□□□ -0.65
LRRC28-215ENST00000559774 PDZRN3Q9UPQ7 1066 aa10.98□□□□□ -0.65
LRRC28-215ENST00000559774 TUBGCP6Q96RT7 1819 aa10.98□□□□□ -0.65
LRRC28-215ENST00000559774 H7C1W4 665 aa10.97□□□□□ -0.65
LRRC28-215ENST00000559774 ZBTB7AO95365 584 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms