RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ANKMY2Q8IV38 441 aa7.79□□□□□ -1.16
SPG11-218ENST00000559754 ARAFP10398 606 aa7.78□□□□□ -1.16
SPG11-218ENST00000559754 PODNQ7Z5L7 613 aa7.78□□□□□ -1.16
SPG11-218ENST00000559754 HINFPQ9BQA5 517 aa7.78□□□□□ -1.16
SPG11-218ENST00000559754 ANKIB1Q9P2G1 1089 aa7.78□□□□□ -1.16
SPG11-218ENST00000559754 GTF3C3Q9Y5Q9 886 aa7.78□□□□□ -1.16
SPG11-218ENST00000559754 ATAD2Q6PL18 1390 aa7.78□□□□□ -1.16
SPG11-218ENST00000559754 PHF20L1A8MW92 1017 aa7.77□□□□□ -1.17
SPG11-218ENST00000559754 HIF1AQ16665 826 aa7.77□□□□□ -1.17
SPG11-218ENST00000559754 SH3PXD2AQ5TCZ1 1133 aa7.77□□□□□ -1.17
SPG11-218ENST00000559754 KANK3Q6NY19 840 aa7.77□□□□□ -1.17
SPG11-218ENST00000559754 BEND7Q8N7W2 519 aaPredicted RBP7.77□□□□□ -1.17
SPG11-218ENST00000559754 SCG3Q8WXD2 468 aaKnown RBP7.77□□□□□ -1.17
SPG11-218ENST00000559754 PHACTR1Q9C0D0 580 aa7.77□□□□□ -1.17
SPG11-218ENST00000559754 AVENQ9NQS1 362 aaPredicted RBP7.77□□□□□ -1.17
SPG11-218ENST00000559754 MARK1Q9P0L2 795 aa7.77□□□□□ -1.17
SPG11-218ENST00000559754 HCN4Q9Y3Q4 1203 aa7.77□□□□□ -1.17
SPG11-218ENST00000559754 C2CD2LO14523 706 aa7.76□□□□□ -1.17
SPG11-218ENST00000559754 LRRC69Q6ZNQ3 347 aa7.76□□□□□ -1.17
SPG11-218ENST00000559754 SLCO4C1Q6ZQN7 724 aa7.76□□□□□ -1.17
SPG11-218ENST00000559754 GALNT6Q8NCL4 622 aa7.76□□□□□ -1.17
SPG11-218ENST00000559754 EDARADDQ8WWZ3 215 aa7.76□□□□□ -1.17
SPG11-218ENST00000559754 C2orf49Q9BVC5 232 aaPredicted RBP7.76□□□□□ -1.17
SPG11-218ENST00000559754 EFSO43281 561 aa7.75□□□□□ -1.17
SPG11-218ENST00000559754 C21orf2O43822 256 aa7.75□□□□□ -1.17
SPG11-218ENST00000559754 CD33P20138 364 aa7.75□□□□□ -1.17
SPG11-218ENST00000559754 RFX1P22670 979 aa7.75□□□□□ -1.17
SPG11-218ENST00000559754 IGFBP4P22692 258 aa7.75□□□□□ -1.17
SPG11-218ENST00000559754 ADH6P28332 368 aa7.75□□□□□ -1.17
SPG11-218ENST00000559754 RASSF7Q02833 373 aa7.75□□□□□ -1.17
SPG11-218ENST00000559754 TMEM151AQ8N4L1 468 aa7.75□□□□□ -1.17
SPG11-218ENST00000559754 CHMP7Q8WUX9 453 aaPredicted RBP7.75□□□□□ -1.17
SPG11-218ENST00000559754 C7orf43Q8WVR3 580 aa7.75□□□□□ -1.17
SPG11-218ENST00000559754 GGA1Q9UJY5 639 aa7.75□□□□□ -1.17
SPG11-218ENST00000559754 PRR12Q9ULL5 1215 aa7.75□□□□□ -1.17
SPG11-218ENST00000559754 DNMT3AQ9Y6K1 912 aaPredicted RBP7.75□□□□□ -1.17
SPG11-218ENST00000559754 IRS1P35568 1242 aa7.74□□□□□ -1.17
SPG11-218ENST00000559754 ALDH16A1Q8IZ83 802 aa7.74□□□□□ -1.17
SPG11-218ENST00000559754 FAM200AQ8TCP9 573 aa7.74□□□□□ -1.17
SPG11-218ENST00000559754 ARXQ96QS3 562 aa7.74□□□□□ -1.17
SPG11-218ENST00000559754 GDF11O95390 407 aa7.73□□□□□ -1.17
SPG11-218ENST00000559754 NEURL1BA8MQ27 555 aa7.72□□□□□ -1.17
SPG11-218ENST00000559754 EPXP11678 715 aa7.72□□□□□ -1.17
SPG11-218ENST00000559754 AMPD1P23109 780 aa7.72□□□□□ -1.17
SPG11-218ENST00000559754 GSK3AP49840 483 aa7.72□□□□□ -1.17
SPG11-218ENST00000559754 ZNF468Q5VIY5 522 aaPredicted RBP7.72□□□□□ -1.17
SPG11-218ENST00000559754 C1orf229Q6ZS94 237 aaPredicted RBP7.72□□□□□ -1.17
SPG11-218ENST00000559754 SUSD3Q96L08 255 aa7.72□□□□□ -1.17
SPG11-218ENST00000559754 SHISA8B8ZZ34 492 aa7.71□□□□□ -1.18
SPG11-218ENST00000559754 PIK3R2O00459 728 aa7.71□□□□□ -1.18
SPG11-218ENST00000559754 NEUROD1Q13562 356 aa7.71□□□□□ -1.18
SPG11-218ENST00000559754 CDCA8Q53HL2 280 aa7.71□□□□□ -1.18
SPG11-218ENST00000559754 VTI1AQ96AJ9 217 aa7.71□□□□□ -1.18
SPG11-218ENST00000559754 CCDC97Q96F63 343 aaPredicted RBP7.71□□□□□ -1.18
SPG11-218ENST00000559754 NGLY1Q96IV0 654 aa7.71□□□□□ -1.18
SPG11-218ENST00000559754 CEP63Q96MT8 703 aa7.71□□□□□ -1.18
SPG11-218ENST00000559754 RRAGCQ9HB90 399 aa7.71□□□□□ -1.18
SPG11-218ENST00000559754 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.71□□□□□ -1.18
SPG11-218ENST00000559754 MKL2Q9ULH7 1088 aa7.71□□□□□ -1.18
SPG11-218ENST00000559754 NOVA2Q9UNW9 492 aaKnown RBP7.71□□□□□ -1.18
SPG11-218ENST00000559754 CNTNAP5Q8WYK1 1306 aa7.71□□□□□ -1.18
SPG11-218ENST00000559754 FOXO3O43524 673 aa7.7□□□□□ -1.18
SPG11-218ENST00000559754 ELOAQ14241 798 aaKnown RBP7.7□□□□□ -1.18
SPG11-218ENST00000559754 RTN1Q16799 776 aa7.7□□□□□ -1.18
SPG11-218ENST00000559754 HSH2DQ96JZ2 352 aa7.7□□□□□ -1.18
SPG11-218ENST00000559754 BRD7Q9NPI1 651 aa7.7□□□□□ -1.18
SPG11-218ENST00000559754 STRN4Q9NRL3 753 aa7.7□□□□□ -1.18
SPG11-218ENST00000559754 SERPINA10Q9UK55 444 aa7.7□□□□□ -1.18
SPG11-218ENST00000559754 HCN2Q9UL51 889 aa7.7□□□□□ -1.18
SPG11-218ENST00000559754 WEE1P30291 646 aa7.69□□□□□ -1.18
SPG11-218ENST00000559754 KCNQ4P56696 695 aa7.69□□□□□ -1.18
SPG11-218ENST00000559754 BTBD6Q96KE9 485 aa7.69□□□□□ -1.18
SPG11-218ENST00000559754 PCBP4P57723 403 aaKnown RBP7.68□□□□□ -1.18
SPG11-218ENST00000559754 TYRO3Q06418 890 aa7.68□□□□□ -1.18
SPG11-218ENST00000559754 SFSWAPQ12872 951 aaKnown RBP7.68□□□□□ -1.18
SPG11-218ENST00000559754 SWI5Q1ZZU3 235 aa7.68□□□□□ -1.18
SPG11-218ENST00000559754 IER5Q5VY09 327 aa7.68□□□□□ -1.18
SPG11-218ENST00000559754 ZNF280CQ8ND82 737 aa7.68□□□□□ -1.18
SPG11-218ENST00000559754 KCNH4Q9UQ05 1017 aa7.68□□□□□ -1.18
SPG11-218ENST00000559754 SIN3BO75182 1162 aa7.67□□□□□ -1.18
SPG11-218ENST00000559754 LGR5O75473 907 aa7.67□□□□□ -1.18
SPG11-218ENST00000559754 ALAS2P22557 587 aa7.67□□□□□ -1.18
SPG11-218ENST00000559754 BTLAQ7Z6A9 289 aa7.67□□□□□ -1.18
SPG11-218ENST00000559754 SYT9Q86SS6 491 aa7.67□□□□□ -1.18
SPG11-218ENST00000559754 ALYREFQ86V81 257 aaKnown RBP7.67□□□□□ -1.18
SPG11-218ENST00000559754 FCHSD1Q86WN1 690 aa7.67□□□□□ -1.18
SPG11-218ENST00000559754 KLF15Q9UIH9 416 aa7.67□□□□□ -1.18
SPG11-218ENST00000559754 ACIN1Q9UKV3 1341 aaKnown RBP7.67□□□□□ -1.18
SPG11-218ENST00000559754 TGFBR3LH3BV60 316 aa7.66□□□□□ -1.18
SPG11-218ENST00000559754 ATG7O95352 703 aa7.66□□□□□ -1.18
SPG11-218ENST00000559754 SNRPNP63162 240 aaKnown RBP7.66□□□□□ -1.18
SPG11-218ENST00000559754 SPEM2Q0P670 501 aa7.66□□□□□ -1.18
SPG11-218ENST00000559754 CHSY3Q70JA7 882 aa7.66□□□□□ -1.18
SPG11-218ENST00000559754 KCTD17Q8N5Z5 321 aa7.66□□□□□ -1.18
SPG11-218ENST00000559754 EFCC1Q9HA90 598 aa7.66□□□□□ -1.18
SPG11-218ENST00000559754 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.65□□□□□ -1.18
SPG11-218ENST00000559754 ELOA3CA0A087WX78 387 aaPredicted RBP7.65□□□□□ -1.18
SPG11-218ENST00000559754 ELOA3DA6NLF2 546 aaPredicted RBP7.65□□□□□ -1.18
SPG11-218ENST00000559754 EPB42P16452 691 aa7.65□□□□□ -1.18
SPG11-218ENST00000559754 ELOA3BQ3SY89 546 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms