RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 IL25Q9H293 177 aa13.51□□□□□ -0.25
SPG11-217ENST00000559511 BRPF3Q9ULD4 1205 aa13.51□□□□□ -0.25
SPG11-217ENST00000559511 ARFGEF2Q9Y6D5 1785 aa13.51□□□□□ -0.25
SPG11-217ENST00000559511 ST18O60284 1047 aa13.51□□□□□ -0.25
SPG11-217ENST00000559511 MAP4K4O95819 1239 aaPredicted RBP13.51□□□□□ -0.25
SPG11-217ENST00000559511 LINS1Q8NG48 757 aa13.51□□□□□ -0.25
SPG11-217ENST00000559511 ITGB4P16144 1822 aa13.51□□□□□ -0.25
SPG11-217ENST00000559511 WNK3Q9BYP7 1800 aa13.5□□□□□ -0.25
SPG11-217ENST00000559511 SNRPA1P09661 255 aaKnown RBP13.5□□□□□ -0.25
SPG11-217ENST00000559511 SSFA2P28290 1259 aa13.5□□□□□ -0.25
SPG11-217ENST00000559511 NKX1-1Q15270 411 aaPredicted RBP13.5□□□□□ -0.25
SPG11-217ENST00000559511 KAZALD1Q96I82 304 aa13.5□□□□□ -0.25
SPG11-217ENST00000559511 FMNL2Q96PY5 1086 aa13.5□□□□□ -0.25
SPG11-217ENST00000559511 PALD1Q9ULE6 856 aa13.5□□□□□ -0.25
SPG11-217ENST00000559511 USP16Q9Y5T5 823 aa13.5□□□□□ -0.25
SPG11-217ENST00000559511 PHLPP1O60346 1717 aa13.5□□□□□ -0.25
SPG11-217ENST00000559511 GRM8O00222 908 aa13.49□□□□□ -0.25
SPG11-217ENST00000559511 DDX58O95786 925 aaKnown RBP13.49□□□□□ -0.25
SPG11-217ENST00000559511 MYL6BP14649 208 aa13.49□□□□□ -0.25
SPG11-217ENST00000559511 HSP90AB4PQ58FF6 505 aa13.49□□□□□ -0.25
SPG11-217ENST00000559511 IL27Q8NEV9 243 aa13.49□□□□□ -0.25
SPG11-217ENST00000559511 ANO2Q9NQ90 1003 aa13.49□□□□□ -0.25
SPG11-217ENST00000559511 BTG4Q9NY30 223 aa13.49□□□□□ -0.25
SPG11-217ENST00000559511 UTYO14607 1347 aa13.49□□□□□ -0.25
SPG11-217ENST00000559511 IGKV5-2P06315 115 aa13.49□□□□□ -0.25
SPG11-217ENST00000559511 SUCLG2Q96I99 432 aa13.49□□□□□ -0.25
SPG11-217ENST00000559511 GZF1Q9H116 711 aaPredicted RBP13.49□□□□□ -0.25
SPG11-217ENST00000559511 PA2G4Q9UQ80 394 aaKnown RBP13.49□□□□□ -0.25
SPG11-217ENST00000559511 PLCH1Q4KWH8 1693 aa13.49□□□□□ -0.25
SPG11-217ENST00000559511 ERVV-2B6SEH9 535 aa13.48□□□□□ -0.25
SPG11-217ENST00000559511 OS9Q13438 667 aaPredicted RBP13.48□□□□□ -0.25
SPG11-217ENST00000559511 DDX54Q8TDD1 881 aaKnown RBP13.48□□□□□ -0.25
SPG11-217ENST00000559511 GBP4Q96PP9 640 aa13.48□□□□□ -0.25
SPG11-217ENST00000559511 KCPQ6ZWJ8 1503 aa13.48□□□□□ -0.25
SPG11-217ENST00000559511 LRP10Q7Z4F1 713 aa13.48□□□□□ -0.25
SPG11-217ENST00000559511 RIC3Q7Z5B4 369 aa13.48□□□□□ -0.25
SPG11-217ENST00000559511 XAGE3Q8WTP9 111 aa13.48□□□□□ -0.25
SPG11-217ENST00000559511 BICC1Q9H694 974 aaKnown RBP13.48□□□□□ -0.25
SPG11-217ENST00000559511 USP42Q9H9J4 1324 aaKnown RBP13.48□□□□□ -0.25
SPG11-217ENST00000559511 KAT6BQ8WYB5 2073 aa13.47□□□□□ -0.25
SPG11-217ENST00000559511 COPS6Q7L5N1 327 aa13.47□□□□□ -0.25
SPG11-217ENST00000559511 PIP4K2AP48426 406 aaPredicted RBP13.46□□□□□ -0.25
SPG11-217ENST00000559511 NEK4P51957 841 aa13.46□□□□□ -0.25
SPG11-217ENST00000559511 ZGPATQ8N5A5 531 aaKnown RBP13.46□□□□□ -0.25
SPG11-217ENST00000559511 NEURL1BA8MQ27 555 aa13.46□□□□□ -0.26
SPG11-217ENST00000559511 MCCP23508 829 aa13.46□□□□□ -0.26
SPG11-217ENST00000559511 PKP1Q13835 747 aa13.46□□□□□ -0.26
SPG11-217ENST00000559511 HDAC5Q9UQL6 1122 aa13.46□□□□□ -0.26
SPG11-217ENST00000559511 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.46□□□□□ -0.26
SPG11-217ENST00000559511 NUP188Q5SRE5 1749 aa13.46□□□□□ -0.26
SPG11-217ENST00000559511 TTC41PQ6P2S7 1318 aa13.45□□□□□ -0.26
SPG11-217ENST00000559511 ANAPC15P60006 121 aa13.45□□□□□ -0.26
SPG11-217ENST00000559511 CNTROBQ8N137 903 aa13.45□□□□□ -0.26
SPG11-217ENST00000559511 CLASRPQ8N2M8 674 aaKnown RBP13.45□□□□□ -0.26
SPG11-217ENST00000559511 DISP2A7MBM2 1401 aa13.45□□□□□ -0.26
SPG11-217ENST00000559511 NRAPQ86VF7 1730 aa13.45□□□□□ -0.26
SPG11-217ENST00000559511 CYP2E1P05181 493 aaPredicted RBP13.45□□□□□ -0.26
SPG11-217ENST00000559511 CLEC17AQ6ZS10 378 aa13.45□□□□□ -0.26
SPG11-217ENST00000559511 IL17RAQ96F46 866 aa13.45□□□□□ -0.26
SPG11-217ENST00000559511 MYD88Q99836 296 aa13.45□□□□□ -0.26
SPG11-217ENST00000559511 METTL22Q9BUU2 404 aaPredicted RBP13.45□□□□□ -0.26
SPG11-217ENST00000559511 TNS2Q63HR2 1409 aa13.44□□□□□ -0.26
SPG11-217ENST00000559511 SGSM2O43147 1006 aa13.44□□□□□ -0.26
SPG11-217ENST00000559511 GLRX3O76003 335 aaKnown RBP13.44□□□□□ -0.26
SPG11-217ENST00000559511 SASH1O94885 1247 aa13.44□□□□□ -0.26
SPG11-217ENST00000559511 GCKRQ14397 625 aa13.44□□□□□ -0.26
SPG11-217ENST00000559511 ERC1Q8IUD2 1116 aa13.44□□□□□ -0.26
SPG11-217ENST00000559511 FSD2A1L4K1 749 aa13.43□□□□□ -0.26
SPG11-217ENST00000559511 BAG4O95429 457 aaKnown RBP13.43□□□□□ -0.26
SPG11-217ENST00000559511 HSPA4P34932 840 aa13.43□□□□□ -0.26
SPG11-217ENST00000559511 NEXNQ0ZGT2 675 aa13.43□□□□□ -0.26
SPG11-217ENST00000559511 ANKRD13DQ6ZTN6 518 aa13.43□□□□□ -0.26
SPG11-217ENST00000559511 TMX3Q96JJ7 454 aa13.43□□□□□ -0.26
SPG11-217ENST00000559511 NUCB2P80303 420 aa13.43□□□□□ -0.26
SPG11-217ENST00000559511 EPHA10Q5JZY3 1008 aa13.43□□□□□ -0.26
SPG11-217ENST00000559511 CWC22Q9HCG8 908 aaKnown RBP13.43□□□□□ -0.26
SPG11-217ENST00000559511 ECHDC1Q9NTX5 307 aa13.43□□□□□ -0.26
SPG11-217ENST00000559511 RAD50Q92878 1312 aa13.42□□□□□ -0.26
SPG11-217ENST00000559511 EPB41L2O43491 1005 aaKnown RBP13.42□□□□□ -0.26
SPG11-217ENST00000559511 IFIT2P09913 472 aaKnown RBP13.42□□□□□ -0.26
SPG11-217ENST00000559511 CWC27Q6UX04 472 aaKnown RBP13.42□□□□□ -0.26
SPG11-217ENST00000559511 AACSQ86V21 672 aa13.42□□□□□ -0.26
SPG11-217ENST00000559511 ARXQ96QS3 562 aa13.42□□□□□ -0.26
SPG11-217ENST00000559511 NBPF26B4DH59 902 aa13.42□□□□□ -0.26
SPG11-217ENST00000559511 L1TD1Q5T7N2 865 aaKnown RBP13.42□□□□□ -0.26
SPG11-217ENST00000559511 NBPF14Q5TI25 921 aa13.42□□□□□ -0.26
SPG11-217ENST00000559511 NBPF10Q6P3W6 841 aaKnown RBP13.42□□□□□ -0.26
SPG11-217ENST00000559511 NBPF15Q8N660 670 aa13.42□□□□□ -0.26
SPG11-217ENST00000559511 KLHDC4Q8TBB5 520 aa13.42□□□□□ -0.26
SPG11-217ENST00000559511 UPF3BQ9BZI7 483 aaKnown RBP13.42□□□□□ -0.26
SPG11-217ENST00000559511 LSG1Q9H089 658 aaKnown RBP13.42□□□□□ -0.26
SPG11-217ENST00000559511 SIL1Q9H173 461 aa13.42□□□□□ -0.26
SPG11-217ENST00000559511 ERBB4Q15303 1308 aa13.41□□□□□ -0.26
SPG11-217ENST00000559511 GOLGA6L3A6NEY3 463 aa13.41□□□□□ -0.26
SPG11-217ENST00000559511 PTCD1O75127 700 aaKnown RBP13.41□□□□□ -0.26
SPG11-217ENST00000559511 MCM2P49736 904 aa13.41□□□□□ -0.26
SPG11-217ENST00000559511 G3BP1Q13283 466 aaKnown RBP eCLIP13.41□□□□□ -0.26
SPG11-217ENST00000559511 JARID2Q92833 1246 aaPredicted RBP13.41□□□□□ -0.26
SPG11-217ENST00000559511 EAF2Q96CJ1 260 aaPredicted RBP13.41□□□□□ -0.26
SPG11-217ENST00000559511 ZDHHC9Q9Y397 364 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms