RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 C2CD5Q86YS7 1000 aa10.68□□□□□ -0.7
SNX1-207ENST00000559401 ZNF784Q8NCA9 323 aaPredicted RBP10.68□□□□□ -0.7
SNX1-207ENST00000559401 NECTIN2Q92692 538 aa10.68□□□□□ -0.7
SNX1-207ENST00000559401 ZBTB3Q9H5J0 574 aa10.68□□□□□ -0.7
SNX1-207ENST00000559401 NIP7Q9Y221 180 aaKnown RBP eCLIP10.68□□□□□ -0.7
SNX1-207ENST00000559401 COL11A2P13942 1736 aaPredicted RBP10.67□□□□□ -0.7
SNX1-207ENST00000559401 ERBB4Q15303 1308 aa10.67□□□□□ -0.7
SNX1-207ENST00000559401 CALD1Q05682 793 aaKnown RBP10.67□□□□□ -0.7
SNX1-207ENST00000559401 KRT24Q2M2I5 525 aa10.67□□□□□ -0.7
SNX1-207ENST00000559401 PRR5LQ6MZQ0 368 aa10.67□□□□□ -0.7
SNX1-207ENST00000559401 CLEC4GQ6UXB4 293 aa10.67□□□□□ -0.7
SNX1-207ENST00000559401 NBPF5PQ86XG9 351 aaPredicted RBP10.67□□□□□ -0.7
SNX1-207ENST00000559401 MAP3K15Q6ZN16 1313 aa10.66□□□□□ -0.7
SNX1-207ENST00000559401 H0YIN7 160 aa10.66□□□□□ -0.7
SNX1-207ENST00000559401 CHL1O00533 1208 aa10.66□□□□□ -0.7
SNX1-207ENST00000559401 ANXA1P04083 346 aa10.66□□□□□ -0.7
SNX1-207ENST00000559401 KCNA3P22001 575 aa10.66□□□□□ -0.7
SNX1-207ENST00000559401 GTF2E1P29083 439 aaPredicted RBP10.66□□□□□ -0.7
SNX1-207ENST00000559401 HLFQ16534 295 aa10.66□□□□□ -0.7
SNX1-207ENST00000559401 TTLL7Q6ZT98 887 aa10.66□□□□□ -0.7
SNX1-207ENST00000559401 ZNF622Q969S3 477 aaKnown RBP eCLIP10.66□□□□□ -0.7
SNX1-207ENST00000559401 GPTP24298 496 aa10.65□□□□□ -0.7
SNX1-207ENST00000559401 PDE6BP35913 854 aa10.65□□□□□ -0.7
SNX1-207ENST00000559401 ZNF526Q8TF50 670 aaPredicted RBP10.65□□□□□ -0.7
SNX1-207ENST00000559401 CFAP44Q96MT7 982 aa10.65□□□□□ -0.7
SNX1-207ENST00000559401 BRIP1Q9BX63 1249 aa10.65□□□□□ -0.7
SNX1-207ENST00000559401 MBIPQ9NS73 344 aa10.65□□□□□ -0.7
SNX1-207ENST00000559401 ATP10DQ9P241 1426 aa10.65□□□□□ -0.7
SNX1-207ENST00000559401 ERVV-1B6SEH8 477 aa10.64□□□□□ -0.71
SNX1-207ENST00000559401 GNAI1P63096 354 aa10.64□□□□□ -0.71
SNX1-207ENST00000559401 AIMP1Q12904 312 aaKnown RBP10.64□□□□□ -0.71
SNX1-207ENST00000559401 PROSER3Q2NL68 480 aa10.64□□□□□ -0.71
SNX1-207ENST00000559401 HDGFL1Q5TGJ6 251 aa10.64□□□□□ -0.71
SNX1-207ENST00000559401 TPTE2Q6XPS3 522 aa10.64□□□□□ -0.71
SNX1-207ENST00000559401 TTLL6Q8N841 843 aa10.64□□□□□ -0.71
SNX1-207ENST00000559401 IFT57Q9NWB7 429 aa10.64□□□□□ -0.71
SNX1-207ENST00000559401 ZNF219Q9P2Y4 722 aaPredicted RBP10.64□□□□□ -0.71
SNX1-207ENST00000559401 ANKRD36CQ5JPF3 1778 aa10.64□□□□□ -0.71
SNX1-207ENST00000559401 RGL2O15211 777 aa10.63□□□□□ -0.71
SNX1-207ENST00000559401 FAM9BQ8IZU0 186 aa10.63□□□□□ -0.71
SNX1-207ENST00000559401 CHPF2Q9P2E5 772 aa10.63□□□□□ -0.71
SNX1-207ENST00000559401 PDZRN3Q9UPQ7 1066 aa10.63□□□□□ -0.71
SNX1-207ENST00000559401 SALL2Q9Y467 1007 aaPredicted RBP10.63□□□□□ -0.71
SNX1-207ENST00000559401 ARFGEF2Q9Y6D5 1785 aa10.62□□□□□ -0.71
SNX1-207ENST00000559401 ELL2O00472 640 aaPredicted RBP10.62□□□□□ -0.71
SNX1-207ENST00000559401 PDIA6Q15084 440 aa10.62□□□□□ -0.71
SNX1-207ENST00000559401 DUSP27Q5VZP5 1158 aa10.62□□□□□ -0.71
SNX1-207ENST00000559401 GIGYF2Q6Y7W6 1299 aaKnown RBP10.62□□□□□ -0.71
SNX1-207ENST00000559401 COPS6Q7L5N1 327 aa10.62□□□□□ -0.71
SNX1-207ENST00000559401 XAGE3Q8WTP9 111 aa10.62□□□□□ -0.71
SNX1-207ENST00000559401 NYXQ9GZU5 481 aa10.62□□□□□ -0.71
SNX1-207ENST00000559401 DDX21Q9NR30 783 aaKnown RBP eCLIP10.62□□□□□ -0.71
SNX1-207ENST00000559401 TNRC6CQ9HCJ0 1690 aaKnown RBP10.62□□□□□ -0.71
SNX1-207ENST00000559401 ADCY9O60503 1353 aa10.62□□□□□ -0.71
SNX1-207ENST00000559401 HOXB7P09629 217 aa10.61□□□□□ -0.71
SNX1-207ENST00000559401 ZNF853P0CG23 659 aa10.61□□□□□ -0.71
SNX1-207ENST00000559401 RASSF7Q02833 373 aa10.61□□□□□ -0.71
SNX1-207ENST00000559401 NUTM1Q86Y26 1132 aa10.61□□□□□ -0.71
SNX1-207ENST00000559401 GPBP1L1Q9HC44 474 aaPredicted RBP10.61□□□□□ -0.71
SNX1-207ENST00000559401 RNF181Q9P0P0 153 aa10.61□□□□□ -0.71
SNX1-207ENST00000559401 CCDC88AQ3V6T2 1871 aa10.61□□□□□ -0.71
SNX1-207ENST00000559401 UBN2Q6ZU65 1347 aa10.6□□□□□ -0.71
SNX1-207ENST00000559401 SBF1O95248 1867 aa10.6□□□□□ -0.71
SNX1-207ENST00000559401 C21orf2O43822 256 aa10.6□□□□□ -0.71
SNX1-207ENST00000559401 C9orf131Q5VYM1 1079 aa10.6□□□□□ -0.71
SNX1-207ENST00000559401 STYK1Q6J9G0 422 aa10.6□□□□□ -0.71
SNX1-207ENST00000559401 PPP1R42Q7Z4L9 355 aa10.6□□□□□ -0.71
SNX1-207ENST00000559401 TSR2Q969E8 191 aaKnown RBP10.6□□□□□ -0.71
SNX1-207ENST00000559401 CNKSR1Q969H4 720 aa10.6□□□□□ -0.71
SNX1-207ENST00000559401 MASTLQ96GX5 879 aa10.6□□□□□ -0.71
SNX1-207ENST00000559401 DBF4Q9UBU7 674 aaPredicted RBP10.6□□□□□ -0.71
SNX1-207ENST00000559401 TIAM2Q8IVF5 1701 aa10.6□□□□□ -0.71
SNX1-207ENST00000559401 ABCC12Q96J65 1359 aa10.6□□□□□ -0.71
SNX1-207ENST00000559401 SLX4Q8IY92 1834 aa10.6□□□□□ -0.71
SNX1-207ENST00000559401 SRGNP10124 158 aa10.59□□□□□ -0.71
SNX1-207ENST00000559401 NPR1P16066 1061 aa10.59□□□□□ -0.71
SNX1-207ENST00000559401 CCDC27Q2M243 656 aa10.59□□□□□ -0.71
SNX1-207ENST00000559401 ERFEQ4G0M1 354 aa10.59□□□□□ -0.71
SNX1-207ENST00000559401 PARP10Q53GL7 1025 aa10.59□□□□□ -0.71
SNX1-207ENST00000559401 HSP90AB3PQ58FF7 597 aa10.59□□□□□ -0.71
SNX1-207ENST00000559401 SUSD4Q5VX71 490 aa10.59□□□□□ -0.71
SNX1-207ENST00000559401 PRPF40BQ6NWY9 871 aaKnown RBP10.59□□□□□ -0.71
SNX1-207ENST00000559401 LRP10Q7Z4F1 713 aa10.59□□□□□ -0.71
SNX1-207ENST00000559401 WWC1Q8IX03 1113 aa10.59□□□□□ -0.71
SNX1-207ENST00000559401 ZNF34Q8IZ26 560 aa10.59□□□□□ -0.71
SNX1-207ENST00000559401 HYPKQ9NX55 129 aa10.59□□□□□ -0.71
SNX1-207ENST00000559401 IBTKQ9P2D0 1353 aaPredicted RBP10.58□□□□□ -0.72
SNX1-207ENST00000559401 C8orf58Q8NAV2 365 aa10.58□□□□□ -0.72
SNX1-207ENST00000559401 RPGRQ92834 1020 aaKnown RBP10.58□□□□□ -0.72
SNX1-207ENST00000559401 FER1L6Q2WGJ9 1857 aa10.57□□□□□ -0.72
SNX1-207ENST00000559401 NTSR2O95665 410 aa10.57□□□□□ -0.72
SNX1-207ENST00000559401 GOLGA2Q08379 1002 aa10.57□□□□□ -0.72
SNX1-207ENST00000559401 ZNF428Q96B54 188 aa10.57□□□□□ -0.72
SNX1-207ENST00000559401 UTP14AQ9BVJ6 771 aaKnown RBP10.57□□□□□ -0.72
SNX1-207ENST00000559401 CHMP4AQ9BY43 222 aa10.57□□□□□ -0.72
SNX1-207ENST00000559401 UTRNP46939 3433 aa10.57□□□□□ -0.72
SNX1-207ENST00000559401 LAMB2P55268 1798 aa10.57□□□□□ -0.72
SNX1-207ENST00000559401 GOLGB1Q14789 3259 aaKnown RBP10.56□□□□□ -0.72
SNX1-207ENST00000559401 NFKBIEO00221 500 aa10.56□□□□□ -0.72
SNX1-207ENST00000559401 TCERG1O14776 1098 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms