RNA–Protein interactions for RNA: ENST00000559127.5

NDUFAF1-203, Transcript of NADH:ubiquinone oxidoreductase complex assembly factor 1, humanhuman

TSL 1 (best)

Gene NDUFAF1, Length 1,585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF1-203ENST00000559127 ZPR1O75312 459 aa23.47■■□□□ 1.35
NDUFAF1-203ENST00000559127 COPS6Q7L5N1 327 aa23.47■■□□□ 1.35
NDUFAF1-203ENST00000559127 G2E3Q7L622 706 aa23.47■■□□□ 1.35
NDUFAF1-203ENST00000559127 ZBTB3Q9H5J0 574 aa23.47■■□□□ 1.35
NDUFAF1-203ENST00000559127 SLC16A10Q8TF71 515 aa23.46■■□□□ 1.35
NDUFAF1-203ENST00000559127 STK31Q9BXU1 1019 aa23.46■■□□□ 1.35
NDUFAF1-203ENST00000559127 HLFQ16534 295 aa23.45■■□□□ 1.34
NDUFAF1-203ENST00000559127 BCL2L13Q9BXK5 485 aa23.45■■□□□ 1.34
NDUFAF1-203ENST00000559127 SLC4A2P04920 1241 aa23.44■■□□□ 1.34
NDUFAF1-203ENST00000559127 HYPKQ9NX55 129 aa23.44■■□□□ 1.34
NDUFAF1-203ENST00000559127 MAP3K15Q6ZN16 1313 aa23.44■■□□□ 1.34
NDUFAF1-203ENST00000559127 PTGER2P43116 358 aa23.44■■□□□ 1.34
NDUFAF1-203ENST00000559127 KIF6Q6ZMV9 814 aa23.44■■□□□ 1.34
NDUFAF1-203ENST00000559127 SGIP1Q9BQI5 828 aa23.44■■□□□ 1.34
NDUFAF1-203ENST00000559127 NRXN2Q9P2S2 1712 aa23.43■■□□□ 1.34
NDUFAF1-203ENST00000559127 SSH1Q8WYL5 1049 aa23.42■■□□□ 1.34
NDUFAF1-203ENST00000559127 TBC1D9BQ66K14 1250 aa23.41■■□□□ 1.34
NDUFAF1-203ENST00000559127 DDR1Q08345 913 aa23.4■■□□□ 1.34
NDUFAF1-203ENST00000559127 BICDL1Q6ZP65 573 aa23.4■■□□□ 1.34
NDUFAF1-203ENST00000559127 SPON1Q9HCB6 807 aa23.4■■□□□ 1.34
NDUFAF1-203ENST00000559127 GOLGB1Q14789 3259 aaKnown RBP23.4■■□□□ 1.34
NDUFAF1-203ENST00000559127 MMP10P09238 476 aa23.4■■□□□ 1.34
NDUFAF1-203ENST00000559127 NFIXQ14938 502 aa23.4■■□□□ 1.34
NDUFAF1-203ENST00000559127 FLIIQ13045 1269 aa23.39■■□□□ 1.33
NDUFAF1-203ENST00000559127 NLGN1Q8N2Q7 840 aa23.39■■□□□ 1.33
NDUFAF1-203ENST00000559127 MRPL50Q8N5N7 158 aaKnown RBP23.39■■□□□ 1.33
NDUFAF1-203ENST00000559127 CHMP4AQ9BY43 222 aa23.39■■□□□ 1.33
NDUFAF1-203ENST00000559127 ADCY9O60503 1353 aa23.38■■□□□ 1.33
NDUFAF1-203ENST00000559127 ATP10DQ9P241 1426 aa23.38■■□□□ 1.33
NDUFAF1-203ENST00000559127 KIF13BQ9NQT8 1826 aa23.37■■□□□ 1.33
NDUFAF1-203ENST00000559127 ERVV-1B6SEH8 477 aa23.37■■□□□ 1.33
NDUFAF1-203ENST00000559127 CT47B1P0C2W7 299 aaPredicted RBP23.37■■□□□ 1.33
NDUFAF1-203ENST00000559127 RARSP54136 660 aaKnown RBP23.37■■□□□ 1.33
NDUFAF1-203ENST00000559127 SMC4Q9NTJ3 1288 aa23.37■■□□□ 1.33
NDUFAF1-203ENST00000559127 ANKRD31Q8N7Z5 1873 aa23.37■■□□□ 1.33
NDUFAF1-203ENST00000559127 GPTP24298 496 aa23.36■■□□□ 1.33
NDUFAF1-203ENST00000559127 TM4SF1P30408 202 aa23.36■■□□□ 1.33
NDUFAF1-203ENST00000559127 GIGYF2Q6Y7W6 1299 aaKnown RBP23.36■■□□□ 1.33
NDUFAF1-203ENST00000559127 ANKRD13DQ6ZTN6 518 aa23.36■■□□□ 1.33
NDUFAF1-203ENST00000559127 PLBD2Q8NHP8 589 aa23.36■■□□□ 1.33
NDUFAF1-203ENST00000559127 ZNF428Q96B54 188 aa23.36■■□□□ 1.33
NDUFAF1-203ENST00000559127 ZNF652Q9Y2D9 606 aa23.36■■□□□ 1.33
NDUFAF1-203ENST00000559127 N4BP2Q86UW6 1770 aaPredicted RBP23.36■■□□□ 1.33
NDUFAF1-203ENST00000559127 POLRMTO00411 1230 aaKnown RBP23.35■■□□□ 1.33
NDUFAF1-203ENST00000559127 UBN2Q6ZU65 1347 aa23.35■■□□□ 1.33
NDUFAF1-203ENST00000559127 FKBP5Q13451 457 aaPredicted RBP23.35■■□□□ 1.33
NDUFAF1-203ENST00000559127 ALDH1L2Q3SY69 923 aa23.35■■□□□ 1.33
NDUFAF1-203ENST00000559127 CLEC4GQ6UXB4 293 aa23.35■■□□□ 1.33
NDUFAF1-203ENST00000559127 NIP7Q9Y221 180 aaKnown RBP eCLIP23.35■■□□□ 1.33
NDUFAF1-203ENST00000559127 KIAA1551Q9HCM1 1747 aa23.34■■□□□ 1.33
NDUFAF1-203ENST00000559127 PI4KAP2A4QPH2 592 aa23.34■■□□□ 1.33
NDUFAF1-203ENST00000559127 POLD1P28340 1107 aa23.34■■□□□ 1.33
NDUFAF1-203ENST00000559127 RIC3Q7Z5B4 369 aa23.34■■□□□ 1.33
NDUFAF1-203ENST00000559127 PI4KAP1Q8N8J0 262 aa23.34■■□□□ 1.33
NDUFAF1-203ENST00000559127 BCAR3O75815 825 aa23.33■■□□□ 1.33
NDUFAF1-203ENST00000559127 MAP3K2Q9Y2U5 619 aa23.33■■□□□ 1.33
NDUFAF1-203ENST00000559127 CARMIL3Q8ND23 1372 aa23.33■■□□□ 1.33
NDUFAF1-203ENST00000559127 TNRC6CQ9HCJ0 1690 aaKnown RBP23.33■■□□□ 1.33
NDUFAF1-203ENST00000559127 FAM177BA6PVY3 158 aa23.31■■□□□ 1.32
NDUFAF1-203ENST00000559127 F6X3S4 739 aa23.31■■□□□ 1.32
NDUFAF1-203ENST00000559127 PARP3Q9Y6F1 533 aa23.31■■□□□ 1.32
NDUFAF1-203ENST00000559127 COL11A2P13942 1736 aaPredicted RBP23.31■■□□□ 1.32
NDUFAF1-203ENST00000559127 ATP5J2-PTCD1G3V325 749 aa23.31■■□□□ 1.32
NDUFAF1-203ENST00000559127 RGL2O15211 777 aa23.31■■□□□ 1.32
NDUFAF1-203ENST00000559127 DDX58O95786 925 aaKnown RBP23.31■■□□□ 1.32
NDUFAF1-203ENST00000559127 KSR2Q6VAB6 950 aa23.31■■□□□ 1.32
NDUFAF1-203ENST00000559127 ZNF34Q8IZ26 560 aa23.31■■□□□ 1.32
NDUFAF1-203ENST00000559127 SETDB2Q96T68 719 aa23.31■■□□□ 1.32
NDUFAF1-203ENST00000559127 LAMB2P55268 1798 aa23.3■■□□□ 1.32
NDUFAF1-203ENST00000559127 DDX60Q8IY21 1712 aaKnown RBP23.3■■□□□ 1.32
NDUFAF1-203ENST00000559127 CCDC24Q8N4L8 307 aa23.3■■□□□ 1.32
NDUFAF1-203ENST00000559127 MYD88Q99836 296 aa23.3■■□□□ 1.32
NDUFAF1-203ENST00000559127 C10orf71Q711Q0 1435 aa23.29■■□□□ 1.32
NDUFAF1-203ENST00000559127 SERPINB2P05120 415 aa23.29■■□□□ 1.32
NDUFAF1-203ENST00000559127 TCIRG1Q13488 830 aa23.29■■□□□ 1.32
NDUFAF1-203ENST00000559127 KLHL34Q8N239 644 aa23.28■■□□□ 1.32
NDUFAF1-203ENST00000559127 SUSD4Q5VX71 490 aa23.27■■□□□ 1.32
NDUFAF1-203ENST00000559127 ISCA1Q9BUE6 129 aa23.27■■□□□ 1.32
NDUFAF1-203ENST00000559127 METTL22Q9BUU2 404 aaPredicted RBP23.27■■□□□ 1.32
NDUFAF1-203ENST00000559127 PPP1R1BQ9UD71 204 aaPredicted RBP23.27■■□□□ 1.32
NDUFAF1-203ENST00000559127 NOB1Q9ULX3 412 aaKnown RBP23.27■■□□□ 1.32
NDUFAF1-203ENST00000559127 HSP90AB3PQ58FF7 597 aa23.27■■□□□ 1.32
NDUFAF1-203ENST00000559127 NLRP10Q86W26 655 aa23.27■■□□□ 1.32
NDUFAF1-203ENST00000559127 DNAAF4Q8WXU2 420 aa23.27■■□□□ 1.32
NDUFAF1-203ENST00000559127 CACNA1SQ13698 1873 aa23.26■■□□□ 1.31
NDUFAF1-203ENST00000559127 ABCC12Q96J65 1359 aa23.26■■□□□ 1.31
NDUFAF1-203ENST00000559127 DLEC1Q9Y238 1755 aa23.26■■□□□ 1.31
NDUFAF1-203ENST00000559127 IGKV5-2P06315 115 aa23.26■■□□□ 1.31
NDUFAF1-203ENST00000559127 CWF19L2Q2TBE0 894 aaKnown RBP23.26■■□□□ 1.31
NDUFAF1-203ENST00000559127 PRR5LQ6MZQ0 368 aa23.26■■□□□ 1.31
NDUFAF1-203ENST00000559127 TNNQ9UQP3 1299 aa23.26■■□□□ 1.31
NDUFAF1-203ENST00000559127 PTPRCP08575 1304 aa23.25■■□□□ 1.31
NDUFAF1-203ENST00000559127 BRCA1P38398 1863 aaKnown RBP23.25■■□□□ 1.31
NDUFAF1-203ENST00000559127 UTRNP46939 3433 aa23.25■■□□□ 1.31
NDUFAF1-203ENST00000559127 NTSR2O95665 410 aa23.25■■□□□ 1.31
NDUFAF1-203ENST00000559127 BRPF1P55201 1214 aaPredicted RBP23.25■■□□□ 1.31
NDUFAF1-203ENST00000559127 NBPF5PQ86XG9 351 aaPredicted RBP23.25■■□□□ 1.31
NDUFAF1-203ENST00000559127 NUTM1Q86Y26 1132 aa23.25■■□□□ 1.31
NDUFAF1-203ENST00000559127 FHDC1Q9C0D6 1143 aaPredicted RBP23.25■■□□□ 1.31
NDUFAF1-203ENST00000559127 CNBD1Q8NA66 436 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms