RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 FLAD1Q8NFF5 587 aa14.07□□□□□ -0.16
TPM1-217ENST00000559108 MTFR1LQ9H019 292 aa14.07□□□□□ -0.16
TPM1-217ENST00000559108 SSH1Q8WYL5 1049 aa14.06□□□□□ -0.16
TPM1-217ENST00000559108 ZBTB3Q9H5J0 574 aa14.06□□□□□ -0.16
TPM1-217ENST00000559108 DBF4Q9UBU7 674 aaPredicted RBP14.06□□□□□ -0.16
TPM1-217ENST00000559108 TNRC6CQ9HCJ0 1690 aaKnown RBP14.06□□□□□ -0.16
TPM1-217ENST00000559108 ADCY9O60503 1353 aa14.06□□□□□ -0.16
TPM1-217ENST00000559108 N4BP2Q86UW6 1770 aaPredicted RBP14.06□□□□□ -0.16
TPM1-217ENST00000559108 AIMP1Q12904 312 aaKnown RBP14.05□□□□□ -0.16
TPM1-217ENST00000559108 TBC1D9BQ66K14 1250 aa14.05□□□□□ -0.16
TPM1-217ENST00000559108 BCL2L13Q9BXK5 485 aa14.05□□□□□ -0.16
TPM1-217ENST00000559108 MAP3K15Q6ZN16 1313 aa14.05□□□□□ -0.16
TPM1-217ENST00000559108 NFIXQ14938 502 aa14.04□□□□□ -0.16
TPM1-217ENST00000559108 CCDC30Q5VVM6 783 aa14.04□□□□□ -0.16
TPM1-217ENST00000559108 MRPL50Q8N5N7 158 aaKnown RBP14.04□□□□□ -0.16
TPM1-217ENST00000559108 SLC16A10Q8TF71 515 aa14.04□□□□□ -0.16
TPM1-217ENST00000559108 CARMIL3Q8ND23 1372 aa14.04□□□□□ -0.16
TPM1-217ENST00000559108 COL11A2P13942 1736 aaPredicted RBP14.04□□□□□ -0.16
TPM1-217ENST00000559108 A0A087WZG4 1122 aa14.03□□□□□ -0.16
TPM1-217ENST00000559108 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
TPM1-217ENST00000559108 MMP10P09238 476 aa14.03□□□□□ -0.16
TPM1-217ENST00000559108 TM4SF1P30408 202 aa14.03□□□□□ -0.16
TPM1-217ENST00000559108 ZNF428Q96B54 188 aa14.03□□□□□ -0.16
TPM1-217ENST00000559108 ARXQ96QS3 562 aa14.03□□□□□ -0.16
TPM1-217ENST00000559108 HYPKQ9NX55 129 aa14.03□□□□□ -0.16
TPM1-217ENST00000559108 UBN2Q6ZU65 1347 aa14.03□□□□□ -0.16
TPM1-217ENST00000559108 ATP10DQ9P241 1426 aa14.03□□□□□ -0.16
TPM1-217ENST00000559108 LAMB2P55268 1798 aa14.03□□□□□ -0.16
TPM1-217ENST00000559108 DDX60Q8IY21 1712 aaKnown RBP14.02□□□□□ -0.16
TPM1-217ENST00000559108 POLRMTO00411 1230 aaKnown RBP14.02□□□□□ -0.17
TPM1-217ENST00000559108 ZPR1O75312 459 aa14.02□□□□□ -0.17
TPM1-217ENST00000559108 HMGB2P26583 209 aaKnown RBP14.02□□□□□ -0.17
TPM1-217ENST00000559108 RARSP54136 660 aaKnown RBP14.01□□□□□ -0.17
TPM1-217ENST00000559108 BICDL1Q6ZP65 573 aa14.01□□□□□ -0.17
TPM1-217ENST00000559108 SPON1Q9HCB6 807 aa14.01□□□□□ -0.17
TPM1-217ENST00000559108 TNNQ9UQP3 1299 aa14.01□□□□□ -0.17
TPM1-217ENST00000559108 C10orf71Q711Q0 1435 aa14□□□□□ -0.17
TPM1-217ENST00000559108 BRCA1P38398 1863 aaKnown RBP14□□□□□ -0.17
TPM1-217ENST00000559108 ERVV-1B6SEH8 477 aa14□□□□□ -0.17
TPM1-217ENST00000559108 GPTP24298 496 aa14□□□□□ -0.17
TPM1-217ENST00000559108 FLIIQ13045 1269 aa14□□□□□ -0.17
TPM1-217ENST00000559108 KIF6Q6ZMV9 814 aa14□□□□□ -0.17
TPM1-217ENST00000559108 ZNF34Q8IZ26 560 aa14□□□□□ -0.17
TPM1-217ENST00000559108 CCDC24Q8N4L8 307 aa14□□□□□ -0.17
TPM1-217ENST00000559108 DLEC1Q9Y238 1755 aa14□□□□□ -0.17
TPM1-217ENST00000559108 COL4A1P02462 1669 aa13.99□□□□□ -0.17
TPM1-217ENST00000559108 F6X3S4 739 aa13.99□□□□□ -0.17
TPM1-217ENST00000559108 BCAR3O75815 825 aa13.99□□□□□ -0.17
TPM1-217ENST00000559108 GIGYF2Q6Y7W6 1299 aaKnown RBP13.99□□□□□ -0.17
TPM1-217ENST00000559108 ANKRD13DQ6ZTN6 518 aa13.99□□□□□ -0.17
TPM1-217ENST00000559108 NLGN1Q8N2Q7 840 aa13.99□□□□□ -0.17
TPM1-217ENST00000559108 PLBD2Q8NHP8 589 aa13.99□□□□□ -0.17
TPM1-217ENST00000559108 STK31Q9BXU1 1019 aa13.99□□□□□ -0.17
TPM1-217ENST00000559108 ABCC12Q96J65 1359 aa13.98□□□□□ -0.17
TPM1-217ENST00000559108 PI4KAP2A4QPH2 592 aa13.98□□□□□ -0.17
TPM1-217ENST00000559108 ATP5J2-PTCD1G3V325 749 aa13.98□□□□□ -0.17
TPM1-217ENST00000559108 PI4KAP1Q8N8J0 262 aa13.98□□□□□ -0.17
TPM1-217ENST00000559108 MAP3K2Q9Y2U5 619 aa13.98□□□□□ -0.17
TPM1-217ENST00000559108 SRCAPQ6ZRS2 3230 aa13.98□□□□□ -0.17
TPM1-217ENST00000559108 RGL2O15211 777 aa13.97□□□□□ -0.17
TPM1-217ENST00000559108 IGKV5-2P06315 115 aa13.97□□□□□ -0.17
TPM1-217ENST00000559108 CT47B1P0C2W7 299 aaPredicted RBP13.97□□□□□ -0.17
TPM1-217ENST00000559108 ALDH1L2Q3SY69 923 aa13.97□□□□□ -0.17
TPM1-217ENST00000559108 SUSD4Q5VX71 490 aa13.97□□□□□ -0.17
TPM1-217ENST00000559108 CLEC4GQ6UXB4 293 aa13.97□□□□□ -0.17
TPM1-217ENST00000559108 SYNE4Q8N205 404 aa13.97□□□□□ -0.17
TPM1-217ENST00000559108 ISCA1Q9BUE6 129 aa13.97□□□□□ -0.17
TPM1-217ENST00000559108 SMC4Q9NTJ3 1288 aa13.97□□□□□ -0.17
TPM1-217ENST00000559108 NIP7Q9Y221 180 aaKnown RBP eCLIP13.97□□□□□ -0.17
TPM1-217ENST00000559108 CACNA1SQ13698 1873 aa13.97□□□□□ -0.17
TPM1-217ENST00000559108 TAF1P21675 1872 aa13.96□□□□□ -0.17
TPM1-217ENST00000559108 PXDNLA1KZ92 1463 aa13.96□□□□□ -0.17
TPM1-217ENST00000559108 FAM177BA6PVY3 158 aa13.96□□□□□ -0.17
TPM1-217ENST00000559108 SERPINB2P05120 415 aa13.96□□□□□ -0.17
TPM1-217ENST00000559108 TCIRG1Q13488 830 aa13.96□□□□□ -0.17
TPM1-217ENST00000559108 PRR5LQ6MZQ0 368 aa13.96□□□□□ -0.17
TPM1-217ENST00000559108 KSR2Q6VAB6 950 aa13.96□□□□□ -0.17
TPM1-217ENST00000559108 NLRP10Q86W26 655 aa13.96□□□□□ -0.17
TPM1-217ENST00000559108 NTSR2O95665 410 aa13.95□□□□□ -0.18
TPM1-217ENST00000559108 FKBP5Q13451 457 aaPredicted RBP13.95□□□□□ -0.18
TPM1-217ENST00000559108 CWF19L2Q2TBE0 894 aaKnown RBP13.95□□□□□ -0.18
TPM1-217ENST00000559108 NLGN2Q8NFZ4 835 aa13.95□□□□□ -0.18
TPM1-217ENST00000559108 MYD88Q99836 296 aa13.95□□□□□ -0.18
TPM1-217ENST00000559108 METTL22Q9BUU2 404 aaPredicted RBP13.95□□□□□ -0.18
TPM1-217ENST00000559108 BRPF1P55201 1214 aaPredicted RBP13.94□□□□□ -0.18
TPM1-217ENST00000559108 C3orf67Q6ZVT6 689 aa13.94□□□□□ -0.18
TPM1-217ENST00000559108 RIC3Q7Z5B4 369 aa13.94□□□□□ -0.18
TPM1-217ENST00000559108 NPM2Q86SE8 214 aaKnown RBP13.94□□□□□ -0.18
TPM1-217ENST00000559108 NUTM1Q86Y26 1132 aa13.94□□□□□ -0.18
TPM1-217ENST00000559108 JARID2Q92833 1246 aaPredicted RBP13.94□□□□□ -0.18
TPM1-217ENST00000559108 FHDC1Q9C0D6 1143 aaPredicted RBP13.94□□□□□ -0.18
TPM1-217ENST00000559108 NOB1Q9ULX3 412 aaKnown RBP13.94□□□□□ -0.18
TPM1-217ENST00000559108 ZNF652Q9Y2D9 606 aa13.94□□□□□ -0.18
TPM1-217ENST00000559108 POLD1P28340 1107 aa13.93□□□□□ -0.18
TPM1-217ENST00000559108 DNAAF4Q8WXU2 420 aa13.93□□□□□ -0.18
TPM1-217ENST00000559108 SETDB2Q96T68 719 aa13.93□□□□□ -0.18
TPM1-217ENST00000559108 PARP3Q9Y6F1 533 aa13.93□□□□□ -0.18
TPM1-217ENST00000559108 IBTKQ9P2D0 1353 aaPredicted RBP13.93□□□□□ -0.18
TPM1-217ENST00000559108 MYH3P11055 1940 aa13.92□□□□□ -0.18
TPM1-217ENST00000559108 ERFEQ4G0M1 354 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms