RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 CNBD1Q8NA66 436 aa10.25□□□□□ -0.77
HMG20A-207ENST00000559035 CNKSR1Q969H4 720 aa10.25□□□□□ -0.77
HMG20A-207ENST00000559035 PANK3Q9H999 370 aa10.25□□□□□ -0.77
HMG20A-207ENST00000559035 STARD3NLO95772 234 aa10.24□□□□□ -0.77
HMG20A-207ENST00000559035 IL6STP40189 918 aaPredicted RBP10.24□□□□□ -0.77
HMG20A-207ENST00000559035 RGS19P49795 217 aa10.24□□□□□ -0.77
HMG20A-207ENST00000559035 MORC1Q86VD1 984 aa10.24□□□□□ -0.77
HMG20A-207ENST00000559035 MASTLQ96GX5 879 aa10.24□□□□□ -0.77
HMG20A-207ENST00000559035 ZNF496Q96IT1 587 aaPredicted RBP10.24□□□□□ -0.77
HMG20A-207ENST00000559035 CEMIPQ8WUJ3 1361 aa10.24□□□□□ -0.77
HMG20A-207ENST00000559035 KLRG2A4D1S0 409 aaPredicted RBP10.23□□□□□ -0.77
HMG20A-207ENST00000559035 FKBP4Q02790 459 aaKnown RBP eCLIP10.23□□□□□ -0.77
HMG20A-207ENST00000559035 CCDC93Q567U6 631 aa10.23□□□□□ -0.77
HMG20A-207ENST00000559035 AMER1Q5JTC6 1135 aaPredicted RBP10.23□□□□□ -0.77
HMG20A-207ENST00000559035 PDE4DIPQ5VU43 2346 aa10.23□□□□□ -0.77
HMG20A-207ENST00000559035 FZD9O00144 591 aa10.22□□□□□ -0.77
HMG20A-207ENST00000559035 EPHX2P34913 555 aa10.22□□□□□ -0.77
HMG20A-207ENST00000559035 ZNF790Q6PG37 636 aa10.22□□□□□ -0.77
HMG20A-207ENST00000559035 HACL1Q9UJ83 578 aa10.22□□□□□ -0.77
HMG20A-207ENST00000559035 TBC1D2BQ9UPU7 963 aa10.22□□□□□ -0.77
HMG20A-207ENST00000559035 RNF123Q5XPI4 1314 aa10.22□□□□□ -0.77
HMG20A-207ENST00000559035 WDR33Q9C0J8 1336 aaKnown RBP10.22□□□□□ -0.77
HMG20A-207ENST00000559035 TRPM7Q96QT4 1865 aa10.21□□□□□ -0.77
HMG20A-207ENST00000559035 HMOX1P09601 288 aa10.21□□□□□ -0.77
HMG20A-207ENST00000559035 ST5P78524 1137 aa10.21□□□□□ -0.77
HMG20A-207ENST00000559035 MAP2K1Q02750 393 aaPredicted RBP10.21□□□□□ -0.77
HMG20A-207ENST00000559035 TTC5Q8N0Z6 440 aa10.21□□□□□ -0.77
HMG20A-207ENST00000559035 ZNF277Q9NRM2 450 aaPredicted RBP10.21□□□□□ -0.77
HMG20A-207ENST00000559035 PCDH10Q9P2E7 1040 aa10.21□□□□□ -0.77
HMG20A-207ENST00000559035 TIMELESSQ9UNS1 1208 aa10.21□□□□□ -0.77
HMG20A-207ENST00000559035 LAMB4A4D0S4 1761 aa10.2□□□□□ -0.78
HMG20A-207ENST00000559035 RGL2O15211 777 aa10.2□□□□□ -0.78
HMG20A-207ENST00000559035 DEFB115Q30KQ5 88 aa10.2□□□□□ -0.78
HMG20A-207ENST00000559035 RIC1Q4ADV7 1423 aa10.2□□□□□ -0.78
HMG20A-207ENST00000559035 EAPPQ56P03 285 aaPredicted RBP10.2□□□□□ -0.78
HMG20A-207ENST00000559035 MAP1SQ66K74 1059 aaPredicted RBP10.2□□□□□ -0.78
HMG20A-207ENST00000559035 OLFM4Q6UX06 510 aa10.2□□□□□ -0.78
HMG20A-207ENST00000559035 PNMA8AQ86V59 439 aaPredicted RBP10.2□□□□□ -0.78
HMG20A-207ENST00000559035 CNTROBQ8N137 903 aa10.2□□□□□ -0.78
HMG20A-207ENST00000559035 IL17REQ8NFR9 667 aa10.2□□□□□ -0.78
HMG20A-207ENST00000559035 SETDB2Q96T68 719 aa10.2□□□□□ -0.78
HMG20A-207ENST00000559035 TEX13AQ9BXU3 409 aaPredicted RBP10.2□□□□□ -0.78
HMG20A-207ENST00000559035 ABCC12Q96J65 1359 aa10.19□□□□□ -0.78
HMG20A-207ENST00000559035 A1BGP04217 495 aa10.19□□□□□ -0.78
HMG20A-207ENST00000559035 NPR1P16066 1061 aa10.19□□□□□ -0.78
HMG20A-207ENST00000559035 DZIP3Q86Y13 1208 aaKnown RBP10.19□□□□□ -0.78
HMG20A-207ENST00000559035 GPC2Q8N158 579 aa10.19□□□□□ -0.78
HMG20A-207ENST00000559035 POLR3GLQ9BT43 218 aa10.19□□□□□ -0.78
HMG20A-207ENST00000559035 DDX21Q9NR30 783 aaKnown RBP eCLIP10.19□□□□□ -0.78
HMG20A-207ENST00000559035 HSPA5P11021 654 aaKnown RBP10.18□□□□□ -0.78
HMG20A-207ENST00000559035 IARSP41252 1262 aaKnown RBP10.18□□□□□ -0.78
HMG20A-207ENST00000559035 SCNN1DP51172 638 aa10.18□□□□□ -0.78
HMG20A-207ENST00000559035 MLLT1Q03111 559 aaPredicted RBP10.18□□□□□ -0.78
HMG20A-207ENST00000559035 CLEC4GQ6UXB4 293 aa10.18□□□□□ -0.78
HMG20A-207ENST00000559035 FMNL2Q96PY5 1086 aa10.18□□□□□ -0.78
HMG20A-207ENST00000559035 PSMD1Q99460 953 aa10.18□□□□□ -0.78
HMG20A-207ENST00000559035 ZNF330Q9Y3S2 320 aaPredicted RBP10.18□□□□□ -0.78
HMG20A-207ENST00000559035 FMR1Q06787 632 aaKnown RBP eCLIP10.17□□□□□ -0.78
HMG20A-207ENST00000559035 CRY2Q49AN0 593 aa10.17□□□□□ -0.78
HMG20A-207ENST00000559035 RTKN2Q8IZC4 609 aa10.17□□□□□ -0.78
HMG20A-207ENST00000559035 CAPNS2Q96L46 248 aa10.17□□□□□ -0.78
HMG20A-207ENST00000559035 KCNQ3O43525 872 aa10.16□□□□□ -0.78
HMG20A-207ENST00000559035 TEFQ10587 303 aa10.16□□□□□ -0.78
HMG20A-207ENST00000559035 CST9Q5W186 159 aa10.16□□□□□ -0.78
HMG20A-207ENST00000559035 CYP4F22Q6NT55 531 aa10.16□□□□□ -0.78
HMG20A-207ENST00000559035 NBPF5PQ86XG9 351 aaPredicted RBP10.16□□□□□ -0.78
HMG20A-207ENST00000559035 GAS2L2Q8NHY3 880 aa10.16□□□□□ -0.78
HMG20A-207ENST00000559035 ABT1Q9ULW3 272 aaKnown RBP10.16□□□□□ -0.78
HMG20A-207ENST00000559035 CLEC11AQ9Y240 323 aa10.16□□□□□ -0.78
HMG20A-207ENST00000559035 KNSTRNQ9Y448 316 aa10.16□□□□□ -0.78
HMG20A-207ENST00000559035 TLL2Q9Y6L7 1015 aa10.16□□□□□ -0.78
HMG20A-207ENST00000559035 IBTKQ9P2D0 1353 aaPredicted RBP10.15□□□□□ -0.78
HMG20A-207ENST00000559035 PRAMEF22A3QJZ6 481 aa10.15□□□□□ -0.78
HMG20A-207ENST00000559035 GNAT3A8MTJ3 354 aa10.15□□□□□ -0.78
HMG20A-207ENST00000559035 DIAPH1O60610 1272 aaKnown RBP10.15□□□□□ -0.78
HMG20A-207ENST00000559035 PIP4K2AP48426 406 aaPredicted RBP10.15□□□□□ -0.78
HMG20A-207ENST00000559035 EIF4G2P78344 907 aaKnown RBP eCLIP10.15□□□□□ -0.78
HMG20A-207ENST00000559035 SLC51AQ86UW1 340 aa10.15□□□□□ -0.78
HMG20A-207ENST00000559035 SYNE4Q8N205 404 aa10.15□□□□□ -0.78
HMG20A-207ENST00000559035 USP16Q9Y5T5 823 aa10.15□□□□□ -0.78
HMG20A-207ENST00000559035 CLSPNQ9HAW4 1339 aa10.14□□□□□ -0.79
HMG20A-207ENST00000559035 CCDC85CA6NKD9 419 aa10.14□□□□□ -0.79
HMG20A-207ENST00000559035 NBPF26B4DH59 902 aa10.14□□□□□ -0.79
HMG20A-207ENST00000559035 TRAF5O00463 557 aa10.14□□□□□ -0.79
HMG20A-207ENST00000559035 NPHP1O15259 732 aa10.14□□□□□ -0.79
HMG20A-207ENST00000559035 ECE1P42892 770 aa10.14□□□□□ -0.79
HMG20A-207ENST00000559035 NBPF10Q6P3W6 841 aaKnown RBP10.14□□□□□ -0.79
HMG20A-207ENST00000559035 NBPF15Q8N660 670 aa10.14□□□□□ -0.79
HMG20A-207ENST00000559035 GPR101Q96P66 508 aaPredicted RBP10.14□□□□□ -0.79
HMG20A-207ENST00000559035 ZNF652Q9Y2D9 606 aa10.14□□□□□ -0.79
HMG20A-207ENST00000559035 KDM3BQ7LBC6 1761 aa10.14□□□□□ -0.79
HMG20A-207ENST00000559035 NPC1L1Q9UHC9 1359 aa10.14□□□□□ -0.79
HMG20A-207ENST00000559035 PER1O15534 1290 aaPredicted RBP10.13□□□□□ -0.79
HMG20A-207ENST00000559035 MAP2K2P36507 400 aa10.13□□□□□ -0.79
HMG20A-207ENST00000559035 EPS15P42566 896 aa10.13□□□□□ -0.79
HMG20A-207ENST00000559035 HHIPL1Q96JK4 782 aa10.13□□□□□ -0.79
HMG20A-207ENST00000559035 MCOLN1Q9GZU1 580 aa10.13□□□□□ -0.79
HMG20A-207ENST00000559035 TSKSQ9UJT2 592 aa10.13□□□□□ -0.79
HMG20A-207ENST00000559035 NIP7Q9Y221 180 aaKnown RBP eCLIP10.13□□□□□ -0.79
HMG20A-207ENST00000559035 NUP98P52948 1817 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms