RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 BLOC1S3Q6QNY0 202 aa7.91□□□□□ -1.14
LRRC28-208ENST00000558771 AK7Q96M32 723 aa7.91□□□□□ -1.14
LRRC28-208ENST00000558771 CARD10Q9BWT7 1032 aa7.91□□□□□ -1.14
LRRC28-208ENST00000558771 GPCPD1Q9NPB8 672 aa7.91□□□□□ -1.14
LRRC28-208ENST00000558771 CABP1Q9NZU7 370 aa7.91□□□□□ -1.14
LRRC28-208ENST00000558771 PAPPAQ13219 1627 aa7.91□□□□□ -1.14
LRRC28-208ENST00000558771 PIK3C2AO00443 1686 aa7.91□□□□□ -1.14
LRRC28-208ENST00000558771 KIAA1210Q9ULL0 1709 aa7.9□□□□□ -1.14
LRRC28-208ENST00000558771 NHSQ6T4R5 1651 aa7.9□□□□□ -1.14
LRRC28-208ENST00000558771 TNS2Q63HR2 1409 aa7.9□□□□□ -1.14
LRRC28-208ENST00000558771 ZPR1O75312 459 aa7.9□□□□□ -1.14
LRRC28-208ENST00000558771 CD46P15529 392 aa7.9□□□□□ -1.14
LRRC28-208ENST00000558771 ZNF827Q17R98 1081 aa7.9□□□□□ -1.14
LRRC28-208ENST00000558771 NBPF1Q3BBV0 1214 aa7.9□□□□□ -1.14
LRRC28-208ENST00000558771 ARHGEF25Q86VW2 580 aa7.9□□□□□ -1.14
LRRC28-208ENST00000558771 ACSBG1Q96GR2 724 aa7.9□□□□□ -1.14
LRRC28-208ENST00000558771 REPIN1Q9BWE0 567 aaKnown RBP7.9□□□□□ -1.14
LRRC28-208ENST00000558771 TRPM1Q7Z4N2 1603 aa7.89□□□□□ -1.15
LRRC28-208ENST00000558771 CENPJQ9HC77 1338 aaPredicted RBP7.89□□□□□ -1.15
LRRC28-208ENST00000558771 TRIM66O15016 1216 aa7.89□□□□□ -1.15
LRRC28-208ENST00000558771 SLC24A3Q9HC58 644 aa7.89□□□□□ -1.15
LRRC28-208ENST00000558771 SHANK3Q9BYB0 1731 aa7.89□□□□□ -1.15
LRRC28-208ENST00000558771 QRICH2Q9H0J4 1663 aa7.89□□□□□ -1.15
LRRC28-208ENST00000558771 CCDC7Q96M83 1385 aa7.88□□□□□ -1.15
LRRC28-208ENST00000558771 AMHR2Q16671 573 aa7.88□□□□□ -1.15
LRRC28-208ENST00000558771 PUS10Q3MIT2 529 aaKnown RBP7.88□□□□□ -1.15
LRRC28-208ENST00000558771 KCNH5Q8NCM2 988 aa7.88□□□□□ -1.15
LRRC28-208ENST00000558771 NKX2-3Q8TAU0 364 aa7.88□□□□□ -1.15
LRRC28-208ENST00000558771 LRRC4BQ9NT99 713 aa7.88□□□□□ -1.15
LRRC28-208ENST00000558771 FAM217BQ9NTX9 383 aaPredicted RBP7.88□□□□□ -1.15
LRRC28-208ENST00000558771 BTAF1O14981 1849 aa7.87□□□□□ -1.15
LRRC28-208ENST00000558771 TTC21BQ7Z4L5 1316 aa7.87□□□□□ -1.15
LRRC28-208ENST00000558771 ATP6V1AP38606 617 aa7.87□□□□□ -1.15
LRRC28-208ENST00000558771 FUT2Q10981 343 aa7.87□□□□□ -1.15
LRRC28-208ENST00000558771 NFAT5O94916 1531 aa7.87□□□□□ -1.15
LRRC28-208ENST00000558771 ABCC6O95255 1503 aa7.87□□□□□ -1.15
LRRC28-208ENST00000558771 KAT6BQ8WYB5 2073 aa7.87□□□□□ -1.15
LRRC28-208ENST00000558771 COL24A1Q17RW2 1714 aa7.86□□□□□ -1.15
LRRC28-208ENST00000558771 QSER1Q2KHR3 1735 aa7.86□□□□□ -1.15
LRRC28-208ENST00000558771 NR1I2O75469 434 aa7.86□□□□□ -1.15
LRRC28-208ENST00000558771 POLD1P28340 1107 aa7.86□□□□□ -1.15
LRRC28-208ENST00000558771 SSTR3P32745 418 aaPredicted RBP7.86□□□□□ -1.15
LRRC28-208ENST00000558771 SCUBE3Q8IX30 993 aa7.86□□□□□ -1.15
LRRC28-208ENST00000558771 NLGN2Q8NFZ4 835 aa7.86□□□□□ -1.15
LRRC28-208ENST00000558771 SLC16A10Q8TF71 515 aa7.86□□□□□ -1.15
LRRC28-208ENST00000558771 PNPLA7Q6ZV29 1317 aa7.85□□□□□ -1.15
LRRC28-208ENST00000558771 TTLL12Q14166 644 aaPredicted RBP7.85□□□□□ -1.15
LRRC28-208ENST00000558771 MORN1Q5T089 497 aa7.85□□□□□ -1.15
LRRC28-208ENST00000558771 TUBGCP6Q96RT7 1819 aa7.85□□□□□ -1.15
LRRC28-208ENST00000558771 TTC21AQ8NDW8 1320 aa7.84□□□□□ -1.15
LRRC28-208ENST00000558771 KDM4AO75164 1064 aa7.84□□□□□ -1.15
LRRC28-208ENST00000558771 IL2RBP14784 551 aa7.84□□□□□ -1.15
LRRC28-208ENST00000558771 YBX3P16989 372 aaKnown RBP eCLIP7.84□□□□□ -1.15
LRRC28-208ENST00000558771 PPP1R18Q6NYC8 613 aa7.84□□□□□ -1.15
LRRC28-208ENST00000558771 NLRP2Q9NX02 1062 aa7.84□□□□□ -1.15
LRRC28-208ENST00000558771 EVC2Q86UK5 1308 aa7.83□□□□□ -1.16
LRRC28-208ENST00000558771 RGS20O76081 388 aa7.83□□□□□ -1.16
LRRC28-208ENST00000558771 KCNQ4P56696 695 aa7.83□□□□□ -1.16
LRRC28-208ENST00000558771 GRIPAP1Q4V328 841 aa7.83□□□□□ -1.16
LRRC28-208ENST00000558771 SLC27A3Q5K4L6 730 aa7.83□□□□□ -1.16
LRRC28-208ENST00000558771 GIGYF2Q6Y7W6 1299 aaKnown RBP7.83□□□□□ -1.16
LRRC28-208ENST00000558771 TFCP2L1Q9NZI6 479 aa7.83□□□□□ -1.16
LRRC28-208ENST00000558771 SLC27A5Q9Y2P5 690 aa7.83□□□□□ -1.16
LRRC28-208ENST00000558771 ATP10DQ9P241 1426 aa7.83□□□□□ -1.16
LRRC28-208ENST00000558771 TLL1O43897 1013 aa7.82□□□□□ -1.16
LRRC28-208ENST00000558771 GRIN3BO60391 1043 aa7.82□□□□□ -1.16
LRRC28-208ENST00000558771 PDE4DQ08499 809 aa7.82□□□□□ -1.16
LRRC28-208ENST00000558771 PARP9Q8IXQ6 854 aa7.82□□□□□ -1.16
LRRC28-208ENST00000558771 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.82□□□□□ -1.16
LRRC28-208ENST00000558771 KTN1Q86UP2 1357 aaKnown RBP7.82□□□□□ -1.16
LRRC28-208ENST00000558771 LTN1O94822 1766 aa7.82□□□□□ -1.16
LRRC28-208ENST00000558771 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.81□□□□□ -1.16
LRRC28-208ENST00000558771 ANKRD24Q8TF21 1146 aa7.81□□□□□ -1.16
LRRC28-208ENST00000558771 USP54Q70EL1 1684 aa7.81□□□□□ -1.16
LRRC28-208ENST00000558771 USP31Q70CQ4 1352 aa7.81□□□□□ -1.16
LRRC28-208ENST00000558771 LY75O60449 1722 aa7.81□□□□□ -1.16
LRRC28-208ENST00000558771 MON2Q7Z3U7 1717 aa7.81□□□□□ -1.16
LRRC28-208ENST00000558771 ADH1BP00325 375 aa7.8□□□□□ -1.16
LRRC28-208ENST00000558771 HSPA6P17066 643 aa7.8□□□□□ -1.16
LRRC28-208ENST00000558771 GGCXP38435 758 aa7.8□□□□□ -1.16
LRRC28-208ENST00000558771 USP46P62068 366 aa7.8□□□□□ -1.16
LRRC28-208ENST00000558771 NME9Q86XW9 330 aa7.8□□□□□ -1.16
LRRC28-208ENST00000558771 NUTM1Q86Y26 1132 aa7.8□□□□□ -1.16
LRRC28-208ENST00000558771 DDX54Q8TDD1 881 aaKnown RBP7.8□□□□□ -1.16
LRRC28-208ENST00000558771 SYTL4Q96C24 671 aaPredicted RBP7.8□□□□□ -1.16
LRRC28-208ENST00000558771 SPSB2Q99619 263 aa7.8□□□□□ -1.16
LRRC28-208ENST00000558771 GPBP1L1Q9HC44 474 aaPredicted RBP7.8□□□□□ -1.16
LRRC28-208ENST00000558771 DOT1LQ8TEK3 1739 aa7.79□□□□□ -1.16
LRRC28-208ENST00000558771 MSL1Q68DK7 614 aa7.79□□□□□ -1.16
LRRC28-208ENST00000558771 BRICD5Q6PL45 260 aa7.79□□□□□ -1.16
LRRC28-208ENST00000558771 COL23A1Q86Y22 540 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-208ENST00000558771 THAP11Q96EK4 314 aa7.79□□□□□ -1.16
LRRC28-208ENST00000558771 SALL2Q9Y467 1007 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-208ENST00000558771 ADCY9O60503 1353 aa7.79□□□□□ -1.16
LRRC28-208ENST00000558771 NSD2O96028 1365 aa7.79□□□□□ -1.16
LRRC28-208ENST00000558771 ANKRD36BQ8N2N9 1353 aa7.79□□□□□ -1.16
LRRC28-208ENST00000558771 FMNL1O95466 1100 aaPredicted RBP7.78□□□□□ -1.16
LRRC28-208ENST00000558771 MS4A1P11836 297 aa7.78□□□□□ -1.16
LRRC28-208ENST00000558771 ZNF526Q8TF50 670 aaPredicted RBP7.78□□□□□ -1.16
LRRC28-208ENST00000558771 BEGAINQ9BUH8 593 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms