RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 POLRMTO00411 1230 aaKnown RBP10.74□□□□□ -0.69
TRAF3-205ENST00000558700 FCHSD2O94868 740 aa10.74□□□□□ -0.69
TRAF3-205ENST00000558700 DPEP1P16444 411 aa10.74□□□□□ -0.69
TRAF3-205ENST00000558700 IL17REQ8NFR9 667 aa10.74□□□□□ -0.69
TRAF3-205ENST00000558700 ZNF496Q96IT1 587 aaPredicted RBP10.74□□□□□ -0.69
TRAF3-205ENST00000558700 FMNL2Q96PY5 1086 aa10.74□□□□□ -0.69
TRAF3-205ENST00000558700 TEX13AQ9BXU3 409 aaPredicted RBP10.74□□□□□ -0.69
TRAF3-205ENST00000558700 NARFQ9UHQ1 456 aa10.74□□□□□ -0.69
TRAF3-205ENST00000558700 KDM3BQ7LBC6 1761 aa10.73□□□□□ -0.69
TRAF3-205ENST00000558700 NEFMP07197 916 aa10.73□□□□□ -0.69
TRAF3-205ENST00000558700 RTF1Q92541 710 aaKnown RBP10.73□□□□□ -0.69
TRAF3-205ENST00000558700 CANXP27824 592 aaKnown RBP10.72□□□□□ -0.69
TRAF3-205ENST00000558700 TM4SF1P30408 202 aa10.72□□□□□ -0.69
TRAF3-205ENST00000558700 PDAP1Q13442 181 aaKnown RBP10.72□□□□□ -0.69
TRAF3-205ENST00000558700 NFIXQ14938 502 aa10.72□□□□□ -0.69
TRAF3-205ENST00000558700 NPM2Q86SE8 214 aaKnown RBP10.72□□□□□ -0.69
TRAF3-205ENST00000558700 ZNF526Q8TF50 670 aaPredicted RBP10.72□□□□□ -0.69
TRAF3-205ENST00000558700 PHACTR3Q96KR7 559 aa10.72□□□□□ -0.69
TRAF3-205ENST00000558700 PIM2Q9P1W9 311 aa10.72□□□□□ -0.69
TRAF3-205ENST00000558700 TNRC6CQ9HCJ0 1690 aaKnown RBP10.72□□□□□ -0.69
TRAF3-205ENST00000558700 COL11A2P13942 1736 aaPredicted RBP10.72□□□□□ -0.69
TRAF3-205ENST00000558700 TIAM2Q8IVF5 1701 aa10.72□□□□□ -0.69
TRAF3-205ENST00000558700 ANKRD31Q8N7Z5 1873 aa10.72□□□□□ -0.69
TRAF3-205ENST00000558700 BTBD11A6QL63 1104 aa10.71□□□□□ -0.69
TRAF3-205ENST00000558700 EIF5P55010 431 aaKnown RBP10.71□□□□□ -0.69
TRAF3-205ENST00000558700 DALRD3Q5D0E6 543 aaKnown RBP10.71□□□□□ -0.69
TRAF3-205ENST00000558700 CARMIL3Q8ND23 1372 aa10.71□□□□□ -0.69
TRAF3-205ENST00000558700 ZNF330Q9Y3S2 320 aaPredicted RBP10.71□□□□□ -0.69
TRAF3-205ENST00000558700 ARFGEF2Q9Y6D5 1785 aa10.7□□□□□ -0.7
TRAF3-205ENST00000558700 HTATSF1O43719 755 aaKnown RBP10.7□□□□□ -0.7
TRAF3-205ENST00000558700 SERPINB2P05120 415 aa10.7□□□□□ -0.7
TRAF3-205ENST00000558700 KCNA3P22001 575 aa10.7□□□□□ -0.7
TRAF3-205ENST00000558700 IL6STP40189 918 aaPredicted RBP10.7□□□□□ -0.7
TRAF3-205ENST00000558700 ARHGAP27Q6ZUM4 889 aa10.7□□□□□ -0.7
TRAF3-205ENST00000558700 KCNV2Q8TDN2 545 aa10.7□□□□□ -0.7
TRAF3-205ENST00000558700 BCL2L12Q9HB09 334 aa10.7□□□□□ -0.7
TRAF3-205ENST00000558700 CHRNA5P30532 468 aa10.69□□□□□ -0.7
TRAF3-205ENST00000558700 MCM10Q7L590 875 aa10.69□□□□□ -0.7
TRAF3-205ENST00000558700 TSPYL2Q9H2G4 693 aaPredicted RBP10.69□□□□□ -0.7
TRAF3-205ENST00000558700 SBF1O95248 1867 aa10.69□□□□□ -0.7
TRAF3-205ENST00000558700 CACNA1SQ13698 1873 aa10.68□□□□□ -0.7
TRAF3-205ENST00000558700 MAPK8IP3Q9UPT6 1336 aa10.68□□□□□ -0.7
TRAF3-205ENST00000558700 BICDL1Q6ZP65 573 aa10.68□□□□□ -0.7
TRAF3-205ENST00000558700 KCNQ3O43525 872 aa10.67□□□□□ -0.7
TRAF3-205ENST00000558700 SNRPA1P09661 255 aaKnown RBP10.67□□□□□ -0.7
TRAF3-205ENST00000558700 C9orf131Q5VYM1 1079 aa10.67□□□□□ -0.7
TRAF3-205ENST00000558700 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.67□□□□□ -0.7
TRAF3-205ENST00000558700 DZIP3Q86Y13 1208 aaKnown RBP10.67□□□□□ -0.7
TRAF3-205ENST00000558700 NPHP1O15259 732 aa10.66□□□□□ -0.7
TRAF3-205ENST00000558700 CAMTA2O94983 1202 aa10.66□□□□□ -0.7
TRAF3-205ENST00000558700 A1BGP04217 495 aa10.66□□□□□ -0.7
TRAF3-205ENST00000558700 DCTN1Q14203 1278 aa10.66□□□□□ -0.7
TRAF3-205ENST00000558700 TBC1D9BQ66K14 1250 aa10.66□□□□□ -0.7
TRAF3-205ENST00000558700 TTLL6Q8N841 843 aa10.66□□□□□ -0.7
TRAF3-205ENST00000558700 CNBD1Q8NA66 436 aa10.66□□□□□ -0.7
TRAF3-205ENST00000558700 PNISRQ8TF01 805 aaKnown RBP10.66□□□□□ -0.7
TRAF3-205ENST00000558700 PNNQ9H307 717 aaKnown RBP10.66□□□□□ -0.7
TRAF3-205ENST00000558700 RNF181Q9P0P0 153 aa10.66□□□□□ -0.7
TRAF3-205ENST00000558700 PDZRN3Q9UPQ7 1066 aa10.66□□□□□ -0.7
TRAF3-205ENST00000558700 TBC1D2BQ9UPU7 963 aa10.66□□□□□ -0.7
TRAF3-205ENST00000558700 ZNF652Q9Y2D9 606 aa10.66□□□□□ -0.7
TRAF3-205ENST00000558700 ZC3H4Q9UPT8 1303 aaKnown RBP10.65□□□□□ -0.7
TRAF3-205ENST00000558700 H0YIN7 160 aa10.65□□□□□ -0.7
TRAF3-205ENST00000558700 PITPNM1O00562 1244 aa10.65□□□□□ -0.7
TRAF3-205ENST00000558700 KIF3CO14782 793 aa10.65□□□□□ -0.7
TRAF3-205ENST00000558700 PDE6BP35913 854 aa10.65□□□□□ -0.7
TRAF3-205ENST00000558700 ST5P78524 1137 aa10.65□□□□□ -0.7
TRAF3-205ENST00000558700 RALBP1Q15311 655 aa10.65□□□□□ -0.7
TRAF3-205ENST00000558700 PRR5LQ6MZQ0 368 aa10.65□□□□□ -0.7
TRAF3-205ENST00000558700 C2CD5Q86YS7 1000 aa10.65□□□□□ -0.7
TRAF3-205ENST00000558700 FER1L6Q2WGJ9 1857 aa10.65□□□□□ -0.7
TRAF3-205ENST00000558700 KDM2BQ8NHM5 1336 aa10.64□□□□□ -0.71
TRAF3-205ENST00000558700 CCDC88AQ3V6T2 1871 aa10.64□□□□□ -0.71
TRAF3-205ENST00000558700 TAF7Q15545 349 aaPredicted RBP10.64□□□□□ -0.71
TRAF3-205ENST00000558700 NFE2L2Q16236 605 aa10.64□□□□□ -0.71
TRAF3-205ENST00000558700 SETDB2Q96T68 719 aa10.64□□□□□ -0.71
TRAF3-205ENST00000558700 BRIP1Q9BX63 1249 aa10.64□□□□□ -0.71
TRAF3-205ENST00000558700 USP16Q9Y5T5 823 aa10.64□□□□□ -0.71
TRAF3-205ENST00000558700 DICER1Q9UPY3 1922 aaKnown RBP10.64□□□□□ -0.71
TRAF3-205ENST00000558700 PRAMEF22A3QJZ6 481 aa10.63□□□□□ -0.71
TRAF3-205ENST00000558700 HSPA6P17066 643 aa10.63□□□□□ -0.71
TRAF3-205ENST00000558700 LMNB1P20700 586 aa10.63□□□□□ -0.71
TRAF3-205ENST00000558700 PIP4K2AP48426 406 aaPredicted RBP10.63□□□□□ -0.71
TRAF3-205ENST00000558700 RASSF7Q02833 373 aa10.63□□□□□ -0.71
TRAF3-205ENST00000558700 CLEC4GQ6UXB4 293 aa10.63□□□□□ -0.71
TRAF3-205ENST00000558700 PLEKHF1Q96S99 279 aa10.63□□□□□ -0.71
TRAF3-205ENST00000558700 MYBBP1AQ9BQG0 1328 aaKnown RBP10.62□□□□□ -0.71
TRAF3-205ENST00000558700 WDR90Q96KV7 1748 aa10.62□□□□□ -0.71
TRAF3-205ENST00000558700 NBPF5PQ86XG9 351 aaPredicted RBP10.62□□□□□ -0.71
TRAF3-205ENST00000558700 C16orf71Q8IYS4 520 aaPredicted RBP10.62□□□□□ -0.71
TRAF3-205ENST00000558700 NMRK2Q9NPI5 230 aa10.62□□□□□ -0.71
TRAF3-205ENST00000558700 NUP98P52948 1817 aa10.62□□□□□ -0.71
TRAF3-205ENST00000558700 SLX4Q8IY92 1834 aa10.61□□□□□ -0.71
TRAF3-205ENST00000558700 NBPF26B4DH59 902 aa10.61□□□□□ -0.71
TRAF3-205ENST00000558700 TOMM70O94826 608 aa10.61□□□□□ -0.71
TRAF3-205ENST00000558700 PSEN1P49768 467 aa10.61□□□□□ -0.71
TRAF3-205ENST00000558700 LMOD3Q0VAK6 560 aa10.61□□□□□ -0.71
TRAF3-205ENST00000558700 NBPF10Q6P3W6 841 aaKnown RBP10.61□□□□□ -0.71
TRAF3-205ENST00000558700 NBPF15Q8N660 670 aa10.61□□□□□ -0.71
TRAF3-205ENST00000558700 ZNF622Q969S3 477 aaKnown RBP eCLIP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms