RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 PRMT3O60678 531 aa14.36□□□□□ -0.11
MARK3-213ENST00000558611 ADH1BP00325 375 aa14.36□□□□□ -0.11
MARK3-213ENST00000558611 ZNF16P17020 682 aaPredicted RBP14.36□□□□□ -0.11
MARK3-213ENST00000558611 PTCRAQ6ISU1 281 aaPredicted RBP14.36□□□□□ -0.11
MARK3-213ENST00000558611 CCDC125Q86Z20 511 aa14.36□□□□□ -0.11
MARK3-213ENST00000558611 CLTCL1P53675 1640 aa14.35□□□□□ -0.11
MARK3-213ENST00000558611 POTEB3A0JP26 581 aa14.35□□□□□ -0.11
MARK3-213ENST00000558611 GIGYF1O75420 1035 aaPredicted RBP14.35□□□□□ -0.11
MARK3-213ENST00000558611 SCNN1AP37088 669 aa14.35□□□□□ -0.11
MARK3-213ENST00000558611 COPS2P61201 443 aa14.35□□□□□ -0.11
MARK3-213ENST00000558611 POTEBQ6S5H4 581 aa14.35□□□□□ -0.11
MARK3-213ENST00000558611 KIAA1522Q9P206 1035 aaPredicted RBP14.35□□□□□ -0.11
MARK3-213ENST00000558611 SCAF11Q99590 1463 aaKnown RBP14.35□□□□□ -0.11
MARK3-213ENST00000558611 TRPM2O94759 1503 aa14.35□□□□□ -0.11
MARK3-213ENST00000558611 STRCP1A6NGW2 1772 aa14.34□□□□□ -0.11
MARK3-213ENST00000558611 IDI1Q13907 227 aa14.34□□□□□ -0.11
MARK3-213ENST00000558611 BPHLQ86WA6 291 aaPredicted RBP14.34□□□□□ -0.11
MARK3-213ENST00000558611 CCDC24Q8N4L8 307 aa14.34□□□□□ -0.11
MARK3-213ENST00000558611 CARD14Q9BXL6 1004 aa14.34□□□□□ -0.11
MARK3-213ENST00000558611 NPHP4O75161 1426 aaPredicted RBP14.33□□□□□ -0.11
MARK3-213ENST00000558611 ANKLE2Q86XL3 938 aa14.33□□□□□ -0.12
MARK3-213ENST00000558611 SLC52A1Q9NWF4 448 aa14.33□□□□□ -0.12
MARK3-213ENST00000558611 PCDHGA11Q9Y5H2 935 aa14.33□□□□□ -0.12
MARK3-213ENST00000558611 MAGEB6P1A0A0J9YX57 407 aa14.32□□□□□ -0.12
MARK3-213ENST00000558611 USP4Q13107 963 aa14.32□□□□□ -0.12
MARK3-213ENST00000558611 ERFEQ4G0M1 354 aa14.32□□□□□ -0.12
MARK3-213ENST00000558611 NPAS4Q8IUM7 802 aa14.32□□□□□ -0.12
MARK3-213ENST00000558611 TPCN2Q8NHX9 752 aa14.32□□□□□ -0.12
MARK3-213ENST00000558611 TMEM2Q9UHN6 1383 aa14.32□□□□□ -0.12
MARK3-213ENST00000558611 ANKRD33BA6NCL7 494 aa14.31□□□□□ -0.12
MARK3-213ENST00000558611 ICMTO60725 284 aa14.31□□□□□ -0.12
MARK3-213ENST00000558611 ZPR1O75312 459 aa14.31□□□□□ -0.12
MARK3-213ENST00000558611 PRIMPOLQ96LW4 560 aa14.31□□□□□ -0.12
MARK3-213ENST00000558611 ABL1P00519 1130 aa14.3□□□□□ -0.12
MARK3-213ENST00000558611 SETD5Q9C0A6 1442 aa14.3□□□□□ -0.12
MARK3-213ENST00000558611 SFI1A8K8P3 1242 aa14.29□□□□□ -0.12
MARK3-213ENST00000558611 NBPF20Q3BBV1 942 aa14.29□□□□□ -0.12
MARK3-213ENST00000558611 NYAP1Q6ZVC0 841 aa14.29□□□□□ -0.12
MARK3-213ENST00000558611 SEPT12Q8IYM1 358 aa14.29□□□□□ -0.12
MARK3-213ENST00000558611 TRIM52Q96A61 297 aa14.29□□□□□ -0.12
MARK3-213ENST00000558611 SLC10A4Q96EP9 437 aa14.29□□□□□ -0.12
MARK3-213ENST00000558611 ESPNB1AK53 854 aa14.28□□□□□ -0.12
MARK3-213ENST00000558611 H3BRB1 525 aa14.28□□□□□ -0.12
MARK3-213ENST00000558611 M0R2N6 131 aa14.28□□□□□ -0.12
MARK3-213ENST00000558611 TLL1O43897 1013 aa14.28□□□□□ -0.12
MARK3-213ENST00000558611 ZFYVE9O95405 1425 aa14.28□□□□□ -0.12
MARK3-213ENST00000558611 PSME1Q06323 249 aa14.28□□□□□ -0.12
MARK3-213ENST00000558611 IQSEC2Q5JU85 1478 aa14.28□□□□□ -0.12
MARK3-213ENST00000558611 GIPC2Q8TF65 315 aa14.28□□□□□ -0.12
MARK3-213ENST00000558611 TUT1Q9H6E5 874 aaKnown RBP14.28□□□□□ -0.12
MARK3-213ENST00000558611 PCDH10Q9P2E7 1040 aa14.28□□□□□ -0.12
MARK3-213ENST00000558611 CDV3Q9UKY7 258 aaKnown RBP14.28□□□□□ -0.12
MARK3-213ENST00000558611 ZNF335Q9H4Z2 1342 aaPredicted RBP14.27□□□□□ -0.12
MARK3-213ENST00000558611 AGERQ15109 404 aa14.27□□□□□ -0.13
MARK3-213ENST00000558611 ZNF326Q5BKZ1 582 aaKnown RBP14.27□□□□□ -0.13
MARK3-213ENST00000558611 ANKRD13DQ6ZTN6 518 aa14.27□□□□□ -0.13
MARK3-213ENST00000558611 GLYCTKQ8IVS8 523 aa14.27□□□□□ -0.13
MARK3-213ENST00000558611 BAP1Q92560 729 aa14.27□□□□□ -0.13
MARK3-213ENST00000558611 XIRP1Q702N8 1843 aaKnown RBP14.27□□□□□ -0.13
MARK3-213ENST00000558611 CPS1P31327 1500 aa14.26□□□□□ -0.13
MARK3-213ENST00000558611 LTKP29376 864 aa14.26□□□□□ -0.13
MARK3-213ENST00000558611 ZNF511Q8NB15 262 aa14.26□□□□□ -0.13
MARK3-213ENST00000558611 C1QTNF2Q9BXJ5 285 aa14.26□□□□□ -0.13
MARK3-213ENST00000558611 SLC6A16Q9GZN6 736 aa14.26□□□□□ -0.13
MARK3-213ENST00000558611 EID1Q9Y6B2 187 aa14.26□□□□□ -0.13
MARK3-213ENST00000558611 CHD2O14647 1828 aaKnown RBP14.26□□□□□ -0.13
MARK3-213ENST00000558611 PPLO60437 1756 aa14.26□□□□□ -0.13
MARK3-213ENST00000558611 C21orf2O43822 256 aa14.25□□□□□ -0.13
MARK3-213ENST00000558611 ZNF211Q13398 564 aaPredicted RBP14.25□□□□□ -0.13
MARK3-213ENST00000558611 FOXJ1Q92949 421 aa14.25□□□□□ -0.13
MARK3-213ENST00000558611 RIMS2Q9UQ26 1411 aa14.24□□□□□ -0.13
MARK3-213ENST00000558611 RAB3GAP2Q9H2M9 1393 aa14.24□□□□□ -0.13
MARK3-213ENST00000558611 WEE1P30291 646 aa14.24□□□□□ -0.13
MARK3-213ENST00000558611 C4orf48Q5BLP8 95 aa14.24□□□□□ -0.13
MARK3-213ENST00000558611 HINFPQ9BQA5 517 aa14.24□□□□□ -0.13
MARK3-213ENST00000558611 PCDHB11Q9Y5F2 797 aa14.24□□□□□ -0.13
MARK3-213ENST00000558611 IFT172Q9UG01 1749 aa14.24□□□□□ -0.13
MARK3-213ENST00000558611 SF3B2Q13435 895 aaKnown RBP14.23□□□□□ -0.13
MARK3-213ENST00000558611 THSD4Q6ZMP0 1018 aa14.23□□□□□ -0.13
MARK3-213ENST00000558611 TRMT44Q8IYL2 757 aaKnown RBP14.23□□□□□ -0.13
MARK3-213ENST00000558611 NRXN3Q9Y4C0 1643 aa14.23□□□□□ -0.13
MARK3-213ENST00000558611 DIP2AQ14689 1571 aa14.22□□□□□ -0.13
MARK3-213ENST00000558611 NWD1Q149M9 1564 aa14.22□□□□□ -0.13
MARK3-213ENST00000558611 NEXMIFQ5QGS0 1516 aa14.22□□□□□ -0.13
MARK3-213ENST00000558611 PTCD1O75127 700 aaKnown RBP14.22□□□□□ -0.13
MARK3-213ENST00000558611 VAMP1P23763 118 aa14.22□□□□□ -0.13
MARK3-213ENST00000558611 FBXO41Q8TF61 875 aa14.22□□□□□ -0.13
MARK3-213ENST00000558611 GTF3C2Q8WUA4 911 aaPredicted RBP14.22□□□□□ -0.13
MARK3-213ENST00000558611 FKBP4Q02790 459 aaKnown RBP eCLIP14.21□□□□□ -0.13
MARK3-213ENST00000558611 ASB16Q96NS5 453 aa14.21□□□□□ -0.13
MARK3-213ENST00000558611 MTRQ99707 1265 aa14.21□□□□□ -0.13
MARK3-213ENST00000558611 ANO2Q9NQ90 1003 aa14.21□□□□□ -0.13
MARK3-213ENST00000558611 DCTN4Q9UJW0 460 aa14.21□□□□□ -0.13
MARK3-213ENST00000558611 PLEKHG1Q9ULL1 1385 aa14.21□□□□□ -0.14
MARK3-213ENST00000558611 LINC01559Q495D7 138 aa14.2□□□□□ -0.14
MARK3-213ENST00000558611 COL26A1Q96A83 441 aa14.2□□□□□ -0.14
MARK3-213ENST00000558611 SETBP1Q9Y6X0 1596 aa14.19□□□□□ -0.14
MARK3-213ENST00000558611 MAPK1P28482 360 aa14.19□□□□□ -0.14
MARK3-213ENST00000558611 COL19A1Q14993 1142 aa14.19□□□□□ -0.14
MARK3-213ENST00000558611 ECM1Q16610 540 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms