RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 RIC3Q7Z5B4 369 aa18.82■□□□□ 0.6
VPS18-202ENST00000558474 ITPRIPQ8IWB1 547 aa18.82■□□□□ 0.6
VPS18-202ENST00000558474 EXOC6Q8TAG9 804 aa18.82■□□□□ 0.6
VPS18-202ENST00000558474 ERVV-1B6SEH8 477 aa18.81■□□□□ 0.6
VPS18-202ENST00000558474 ALDH1L1O75891 902 aa18.81■□□□□ 0.6
VPS18-202ENST00000558474 TXNRD1Q16881 649 aa18.81■□□□□ 0.6
VPS18-202ENST00000558474 KIF6Q6ZMV9 814 aa18.81■□□□□ 0.6
VPS18-202ENST00000558474 MAP3K2Q9Y2U5 619 aa18.81■□□□□ 0.6
VPS18-202ENST00000558474 F6X3S4 739 aa18.8■□□□□ 0.6
VPS18-202ENST00000558474 RPS6KA4O75676 772 aa18.8■□□□□ 0.6
VPS18-202ENST00000558474 PIP4K2AP48426 406 aaPredicted RBP18.8■□□□□ 0.6
VPS18-202ENST00000558474 NEXNQ0ZGT2 675 aa18.8■□□□□ 0.6
VPS18-202ENST00000558474 SLC4A10Q6U841 1118 aa18.8■□□□□ 0.6
VPS18-202ENST00000558474 LINS1Q8NG48 757 aa18.8■□□□□ 0.6
VPS18-202ENST00000558474 METTL22Q9BUU2 404 aaPredicted RBP18.8■□□□□ 0.6
VPS18-202ENST00000558474 SRCIN1Q9C0H9 1055 aa18.8■□□□□ 0.6
VPS18-202ENST00000558474 MAP3K15Q6ZN16 1313 aa18.79■□□□□ 0.6
VPS18-202ENST00000558474 ZBTB7BO15156 539 aaPredicted RBP18.79■□□□□ 0.6
VPS18-202ENST00000558474 SF3B2Q13435 895 aaKnown RBP18.79■□□□□ 0.6
VPS18-202ENST00000558474 BEND3Q5T5X7 828 aa18.79■□□□□ 0.6
VPS18-202ENST00000558474 LRRC4BQ9NT99 713 aa18.79■□□□□ 0.6
VPS18-202ENST00000558474 PPP4R2Q9NY27 417 aa18.79■□□□□ 0.6
VPS18-202ENST00000558474 EP400Q96L91 3159 aa18.78■□□□□ 0.6
VPS18-202ENST00000558474 ADRA2BP18089 450 aa18.78■□□□□ 0.6
VPS18-202ENST00000558474 HSP90AB3PQ58FF7 597 aa18.78■□□□□ 0.6
VPS18-202ENST00000558474 TTLL7Q6ZT98 887 aa18.78■□□□□ 0.6
VPS18-202ENST00000558474 PROM2Q8N271 834 aa18.78■□□□□ 0.6
VPS18-202ENST00000558474 COL15A1P39059 1388 aa18.78■□□□□ 0.6
VPS18-202ENST00000558474 BCORQ6W2J9 1755 aa18.78■□□□□ 0.6
VPS18-202ENST00000558474 ZBTB40Q9NUA8 1239 aa18.77■□□□□ 0.6
VPS18-202ENST00000558474 RTCBQ9Y3I0 505 aaKnown RBP18.77■□□□□ 0.6
VPS18-202ENST00000558474 ANKRD36CQ5JPF3 1778 aa18.77■□□□□ 0.6
VPS18-202ENST00000558474 UBR3Q6ZT12 1888 aa18.77■□□□□ 0.6
VPS18-202ENST00000558474 NUP98P52948 1817 aa18.77■□□□□ 0.59
VPS18-202ENST00000558474 GNAI3P08754 354 aa18.76■□□□□ 0.59
VPS18-202ENST00000558474 BAG6P46379 1132 aa18.76■□□□□ 0.59
VPS18-202ENST00000558474 GIGYF2Q6Y7W6 1299 aaKnown RBP18.76■□□□□ 0.59
VPS18-202ENST00000558474 DZIP3Q86Y13 1208 aaKnown RBP18.76■□□□□ 0.59
VPS18-202ENST00000558474 AK7Q96M32 723 aa18.76■□□□□ 0.59
VPS18-202ENST00000558474 HDAC5Q9UQL6 1122 aa18.76■□□□□ 0.59
VPS18-202ENST00000558474 AFDNP55196 1824 aaKnown RBP18.76■□□□□ 0.59
VPS18-202ENST00000558474 KCNQ4P56696 695 aa18.75■□□□□ 0.59
VPS18-202ENST00000558474 TRIM28Q13263 835 aaKnown RBP18.75■□□□□ 0.59
VPS18-202ENST00000558474 CAMKK2Q96RR4 588 aa18.75■□□□□ 0.59
VPS18-202ENST00000558474 ZNF330Q9Y3S2 320 aaPredicted RBP18.75■□□□□ 0.59
VPS18-202ENST00000558474 SCN7AQ01118 1682 aa18.74■□□□□ 0.59
VPS18-202ENST00000558474 GNPATO15228 680 aa18.74■□□□□ 0.59
VPS18-202ENST00000558474 TCIRG1Q13488 830 aa18.74■□□□□ 0.59
VPS18-202ENST00000558474 CLEC4GQ6UXB4 293 aa18.74■□□□□ 0.59
VPS18-202ENST00000558474 SSFA2P28290 1259 aa18.73■□□□□ 0.59
VPS18-202ENST00000558474 MYD88Q99836 296 aa18.73■□□□□ 0.59
VPS18-202ENST00000558474 ZBTB3Q9H5J0 574 aa18.73■□□□□ 0.59
VPS18-202ENST00000558474 ZNF652Q9Y2D9 606 aa18.73■□□□□ 0.59
VPS18-202ENST00000558474 UTYO14607 1347 aa18.73■□□□□ 0.59
VPS18-202ENST00000558474 NEURL1BA8MQ27 555 aa18.72■□□□□ 0.59
VPS18-202ENST00000558474 CAMTA2O94983 1202 aa18.72■□□□□ 0.59
VPS18-202ENST00000558474 IGKV5-2P06315 115 aa18.72■□□□□ 0.59
VPS18-202ENST00000558474 TRAPPC3LQ5T215 181 aa18.72■□□□□ 0.59
VPS18-202ENST00000558474 CCDC191Q8NCU4 936 aa18.72■□□□□ 0.59
VPS18-202ENST00000558474 ISCA1Q9BUE6 129 aa18.72■□□□□ 0.59
VPS18-202ENST00000558474 NARFQ9UHQ1 456 aa18.72■□□□□ 0.59
VPS18-202ENST00000558474 C4AP0C0L4 1744 aa18.71■□□□□ 0.59
VPS18-202ENST00000558474 QSER1Q2KHR3 1735 aa18.71■□□□□ 0.59
VPS18-202ENST00000558474 FLAD1Q8NFF5 587 aa18.71■□□□□ 0.59
VPS18-202ENST00000558474 USP44Q9H0E7 712 aa18.71■□□□□ 0.59
VPS18-202ENST00000558474 TBC1D2BQ9UPU7 963 aa18.71■□□□□ 0.59
VPS18-202ENST00000558474 GCKRQ14397 625 aa18.7■□□□□ 0.58
VPS18-202ENST00000558474 AKT1S1Q96B36 256 aa18.7■□□□□ 0.58
VPS18-202ENST00000558474 ARXQ96QS3 562 aa18.7■□□□□ 0.58
VPS18-202ENST00000558474 GRM8O00222 908 aa18.69■□□□□ 0.58
VPS18-202ENST00000558474 CWF19L2Q2TBE0 894 aaKnown RBP18.69■□□□□ 0.58
VPS18-202ENST00000558474 MEIS3Q99687 375 aa18.69■□□□□ 0.58
VPS18-202ENST00000558474 CWC25Q9NXE8 425 aaPredicted RBP18.69■□□□□ 0.58
VPS18-202ENST00000558474 C9orf78Q9NZ63 289 aaPredicted RBP18.69■□□□□ 0.58
VPS18-202ENST00000558474 ZPR1O75312 459 aa18.68■□□□□ 0.58
VPS18-202ENST00000558474 GNAI2P04899 355 aa18.68■□□□□ 0.58
VPS18-202ENST00000558474 UBTFL1P0CB47 393 aaPredicted RBP18.68■□□□□ 0.58
VPS18-202ENST00000558474 RFC4P35249 363 aa18.68■□□□□ 0.58
VPS18-202ENST00000558474 EN1Q05925 392 aaPredicted RBP18.68■□□□□ 0.58
VPS18-202ENST00000558474 EZH2Q15910 746 aaKnown RBP18.68■□□□□ 0.58
VPS18-202ENST00000558474 HLFQ16534 295 aa18.68■□□□□ 0.58
VPS18-202ENST00000558474 ZNF34Q8IZ26 560 aa18.68■□□□□ 0.58
VPS18-202ENST00000558474 ARHGEF1Q92888 912 aaKnown RBP18.68■□□□□ 0.58
VPS18-202ENST00000558474 CCDC136Q96JN2 1154 aa18.68■□□□□ 0.58
VPS18-202ENST00000558474 PARP10Q53GL7 1025 aa18.67■□□□□ 0.58
VPS18-202ENST00000558474 RPAP2Q8IXW5 612 aaPredicted RBP18.67■□□□□ 0.58
VPS18-202ENST00000558474 USP42Q9H9J4 1324 aaKnown RBP18.67■□□□□ 0.58
VPS18-202ENST00000558474 TUBGCP6Q96RT7 1819 aa18.66■□□□□ 0.58
VPS18-202ENST00000558474 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.66■□□□□ 0.58
VPS18-202ENST00000558474 ATP5J2-PTCD1G3V325 749 aa18.65■□□□□ 0.58
VPS18-202ENST00000558474 H7C1W4 665 aa18.65■□□□□ 0.58
VPS18-202ENST00000558474 RWDD1Q9H446 243 aaPredicted RBP18.65■□□□□ 0.58
VPS18-202ENST00000558474 TFCP2L1Q9NZI6 479 aa18.65■□□□□ 0.58
VPS18-202ENST00000558474 NBPF7P0C2Y1 421 aaPredicted RBP18.64■□□□□ 0.57
VPS18-202ENST00000558474 HDAC1Q13547 482 aaPredicted RBP18.64■□□□□ 0.57
VPS18-202ENST00000558474 NLRP10Q86W26 655 aa18.64■□□□□ 0.57
VPS18-202ENST00000558474 PCDHB15Q9Y5E8 787 aa18.64■□□□□ 0.57
VPS18-202ENST00000558474 COL24A1Q17RW2 1714 aa18.63■□□□□ 0.57
VPS18-202ENST00000558474 PCCAP05165 728 aaPredicted RBP18.63■□□□□ 0.57
VPS18-202ENST00000558474 ZNF827Q17R98 1081 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms