RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 GMPRP36959 345 aa10.66□□□□□ -0.7
RTF1-204ENST00000558117 FOXK2Q01167 660 aa10.66□□□□□ -0.7
RTF1-204ENST00000558117 TBCELQ5QJ74 424 aa10.66□□□□□ -0.7
RTF1-204ENST00000558117 LCE2AQ5TA79 106 aaPredicted RBP10.66□□□□□ -0.7
RTF1-204ENST00000558117 C1orf216Q8TAB5 229 aa10.66□□□□□ -0.7
RTF1-204ENST00000558117 NUCKS1Q9H1E3 243 aaKnown RBP10.66□□□□□ -0.7
RTF1-204ENST00000558117 CUEDC1Q9NWM3 386 aaPredicted RBP10.66□□□□□ -0.7
RTF1-204ENST00000558117 ZNF232Q9UNY5 417 aa10.66□□□□□ -0.7
RTF1-204ENST00000558117 NUP160Q12769 1436 aa10.66□□□□□ -0.7
RTF1-204ENST00000558117 PSMA6P60900 246 aaKnown RBP10.65□□□□□ -0.7
RTF1-204ENST00000558117 ELOAQ14241 798 aaKnown RBP10.65□□□□□ -0.7
RTF1-204ENST00000558117 STK32AQ8WU08 396 aa10.65□□□□□ -0.7
RTF1-204ENST00000558117 ZNF837Q96EG3 531 aaPredicted RBP10.65□□□□□ -0.7
RTF1-204ENST00000558117 TSPAN10Q9H1Z9 355 aaPredicted RBP10.65□□□□□ -0.7
RTF1-204ENST00000558117 PPP1R15AO75807 674 aaPredicted RBP10.64□□□□□ -0.71
RTF1-204ENST00000558117 TEAD4Q15561 434 aa10.64□□□□□ -0.71
RTF1-204ENST00000558117 EFHC2Q5JST6 749 aa10.64□□□□□ -0.71
RTF1-204ENST00000558117 LCE2CQ5TA81 110 aa10.64□□□□□ -0.71
RTF1-204ENST00000558117 RUBCNLQ9H714 662 aa10.64□□□□□ -0.71
RTF1-204ENST00000558117 PARP3Q9Y6F1 533 aa10.64□□□□□ -0.71
RTF1-204ENST00000558117 SERTM1A2A2V5 107 aa10.63□□□□□ -0.71
RTF1-204ENST00000558117 PPP1R12BO60237 982 aaPredicted RBP10.63□□□□□ -0.71
RTF1-204ENST00000558117 L3MBTL2Q969R5 705 aa10.63□□□□□ -0.71
RTF1-204ENST00000558117 TRERF1Q96PN7 1200 aa10.63□□□□□ -0.71
RTF1-204ENST00000558117 ZDHHC3Q9NYG2 299 aa10.63□□□□□ -0.71
RTF1-204ENST00000558117 NOS2P35228 1153 aa10.62□□□□□ -0.71
RTF1-204ENST00000558117 LBRQ14739 615 aaKnown RBP10.62□□□□□ -0.71
RTF1-204ENST00000558117 DBN1Q16643 649 aa10.62□□□□□ -0.71
RTF1-204ENST00000558117 ZNF295-AS1Q8N0V1 137 aa10.62□□□□□ -0.71
RTF1-204ENST00000558117 PPRC1Q5VV67 1664 aaKnown RBP10.62□□□□□ -0.71
RTF1-204ENST00000558117 GRIN2AQ12879 1464 aa10.61□□□□□ -0.71
RTF1-204ENST00000558117 PRG4Q92954 1404 aaPredicted RBP10.61□□□□□ -0.71
RTF1-204ENST00000558117 WIPF1O43516 503 aa10.61□□□□□ -0.71
RTF1-204ENST00000558117 ARSJQ5FYB0 599 aaPredicted RBP10.61□□□□□ -0.71
RTF1-204ENST00000558117 TMEM164Q5U3C3 297 aa10.61□□□□□ -0.71
RTF1-204ENST00000558117 BICDL1Q6ZP65 573 aa10.61□□□□□ -0.71
RTF1-204ENST00000558117 GAS2L2Q8NHY3 880 aa10.61□□□□□ -0.71
RTF1-204ENST00000558117 SCG3Q8WXD2 468 aaKnown RBP10.61□□□□□ -0.71
RTF1-204ENST00000558117 GTPBP3Q969Y2 492 aaKnown RBP10.61□□□□□ -0.71
RTF1-204ENST00000558117 PCF11O94913 1555 aaKnown RBP10.6□□□□□ -0.71
RTF1-204ENST00000558117 ACIN1Q9UKV3 1341 aaKnown RBP10.6□□□□□ -0.71
RTF1-204ENST00000558117 TOP2AP11388 1531 aaKnown RBP10.6□□□□□ -0.71
RTF1-204ENST00000558117 ADCY10Q96PN6 1610 aa10.6□□□□□ -0.71
RTF1-204ENST00000558117 ATP4AP20648 1035 aa10.6□□□□□ -0.71
RTF1-204ENST00000558117 GPR161Q8N6U8 529 aaKnown RBP10.6□□□□□ -0.71
RTF1-204ENST00000558117 ZDHHC1Q8WTX9 485 aa10.6□□□□□ -0.71
RTF1-204ENST00000558117 COL25A1Q9BXS0 654 aaPredicted RBP10.6□□□□□ -0.71
RTF1-204ENST00000558117 GJA3Q9Y6H8 435 aa10.6□□□□□ -0.71
RTF1-204ENST00000558117 ATAD2Q6PL18 1390 aa10.6□□□□□ -0.71
RTF1-204ENST00000558117 CRISPLD1Q9H336 500 aa10.59□□□□□ -0.71
RTF1-204ENST00000558117 PTPRMP28827 1452 aa10.58□□□□□ -0.72
RTF1-204ENST00000558117 CARNS1A5YM72 827 aa10.58□□□□□ -0.72
RTF1-204ENST00000558117 GPR25O00155 361 aa10.58□□□□□ -0.72
RTF1-204ENST00000558117 C21orf2O43822 256 aa10.58□□□□□ -0.72
RTF1-204ENST00000558117 TXLNAP40222 546 aa10.58□□□□□ -0.72
RTF1-204ENST00000558117 INSM1Q01101 510 aaPredicted RBP10.58□□□□□ -0.72
RTF1-204ENST00000558117 PHF24Q9UPV7 400 aa10.58□□□□□ -0.72
RTF1-204ENST00000558117 FGD5Q6ZNL6 1462 aa10.57□□□□□ -0.72
RTF1-204ENST00000558117 EML1O00423 815 aa10.57□□□□□ -0.72
RTF1-204ENST00000558117 IGFBP4P22692 258 aa10.57□□□□□ -0.72
RTF1-204ENST00000558117 SWI5Q1ZZU3 235 aa10.57□□□□□ -0.72
RTF1-204ENST00000558117 FIGNL1Q6PIW4 674 aa10.57□□□□□ -0.72
RTF1-204ENST00000558117 CNTNAP3BQ96NU0 1288 aa10.57□□□□□ -0.72
RTF1-204ENST00000558117 CNTNAP3Q9BZ76 1288 aa10.57□□□□□ -0.72
RTF1-204ENST00000558117 SH3PXD2AQ5TCZ1 1133 aa10.56□□□□□ -0.72
RTF1-204ENST00000558117 NLRP8Q86W28 1048 aa10.56□□□□□ -0.72
RTF1-204ENST00000558117 STAG2Q8N3U4 1231 aa10.56□□□□□ -0.72
RTF1-204ENST00000558117 RHPN1Q8TCX5 695 aa10.56□□□□□ -0.72
RTF1-204ENST00000558117 NEUROD4Q9HD90 331 aa10.56□□□□□ -0.72
RTF1-204ENST00000558117 A0A1W2PNR3 127 aa10.55□□□□□ -0.72
RTF1-204ENST00000558117 HIRAP54198 1017 aaPredicted RBP10.55□□□□□ -0.72
RTF1-204ENST00000558117 VTI1AQ96AJ9 217 aa10.55□□□□□ -0.72
RTF1-204ENST00000558117 SLAIN2Q9P270 581 aa10.55□□□□□ -0.72
RTF1-204ENST00000558117 HCN4Q9Y3Q4 1203 aa10.55□□□□□ -0.72
RTF1-204ENST00000558117 GPC6Q9Y625 555 aaPredicted RBP10.55□□□□□ -0.72
RTF1-204ENST00000558117 TMEM88BA6NKF7 163 aa10.54□□□□□ -0.72
RTF1-204ENST00000558117 PRIMPOLQ96LW4 560 aa10.54□□□□□ -0.72
RTF1-204ENST00000558117 PHACTR1Q9C0D0 580 aa10.54□□□□□ -0.72
RTF1-204ENST00000558117 CCDC88BA6NC98 1476 aa10.54□□□□□ -0.72
RTF1-204ENST00000558117 PBRM1Q86U86 1689 aa10.53□□□□□ -0.72
RTF1-204ENST00000558117 GLI2P10070 1586 aa10.53□□□□□ -0.72
RTF1-204ENST00000558117 THBS1P07996 1170 aa10.53□□□□□ -0.72
RTF1-204ENST00000558117 WEE1P30291 646 aa10.53□□□□□ -0.72
RTF1-204ENST00000558117 HSPA2P54652 639 aa10.53□□□□□ -0.72
RTF1-204ENST00000558117 RNFT1Q5M7Z0 435 aa10.53□□□□□ -0.72
RTF1-204ENST00000558117 C1orf53Q5VUE5 145 aa10.53□□□□□ -0.72
RTF1-204ENST00000558117 NGLY1Q96IV0 654 aa10.53□□□□□ -0.72
RTF1-204ENST00000558117 ZIC5Q96T25 663 aa10.53□□□□□ -0.72
RTF1-204ENST00000558117 C2orf49Q9BVC5 232 aaPredicted RBP10.53□□□□□ -0.72
RTF1-204ENST00000558117 CFHR5Q9BXR6 569 aa10.53□□□□□ -0.72
RTF1-204ENST00000558117 FOXO3O43524 673 aa10.52□□□□□ -0.73
RTF1-204ENST00000558117 PRMT3O60678 531 aa10.52□□□□□ -0.73
RTF1-204ENST00000558117 KRT76Q01546 638 aa10.52□□□□□ -0.73
RTF1-204ENST00000558117 MBIPQ9NS73 344 aa10.52□□□□□ -0.73
RTF1-204ENST00000558117 ATXN7L1Q9ULK2 861 aaPredicted RBP10.52□□□□□ -0.73
RTF1-204ENST00000558117 NSFL1CQ9UNZ2 370 aaKnown RBP10.52□□□□□ -0.73
RTF1-204ENST00000558117 ATXN7O15265 892 aaPredicted RBP10.51□□□□□ -0.73
RTF1-204ENST00000558117 MX2P20592 715 aa10.51□□□□□ -0.73
RTF1-204ENST00000558117 GAS6Q14393 721 aa10.51□□□□□ -0.73
RTF1-204ENST00000558117 POTEAQ6S8J7 498 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms