RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 HYPKQ9NX55 129 aa21.57■■□□□ 1.04
PBX4-202ENST00000557978 KIF13BQ9NQT8 1826 aa21.57■■□□□ 1.04
PBX4-202ENST00000557978 ERVV-1B6SEH8 477 aa21.56■■□□□ 1.04
PBX4-202ENST00000557978 TM4SF1P30408 202 aa21.56■■□□□ 1.04
PBX4-202ENST00000557978 PROSER3Q2NL68 480 aa21.56■■□□□ 1.04
PBX4-202ENST00000557978 ANKRD36CQ5JPF3 1778 aa21.56■■□□□ 1.04
PBX4-202ENST00000557978 ANXA1P04083 346 aa21.55■■□□□ 1.04
PBX4-202ENST00000557978 LRP10Q7Z4F1 713 aa21.55■■□□□ 1.04
PBX4-202ENST00000557978 STK31Q9BXU1 1019 aa21.55■■□□□ 1.04
PBX4-202ENST00000557978 MAP3K15Q6ZN16 1313 aa21.55■■□□□ 1.04
PBX4-202ENST00000557978 COPS6Q7L5N1 327 aa21.55■■□□□ 1.04
PBX4-202ENST00000557978 NRXN2Q9P2S2 1712 aa21.54■■□□□ 1.04
PBX4-202ENST00000557978 TTLL7Q6ZT98 887 aa21.54■■□□□ 1.04
PBX4-202ENST00000557978 VAMP4O75379 141 aa21.53■■□□□ 1.04
PBX4-202ENST00000557978 NFIXQ14938 502 aa21.53■■□□□ 1.04
PBX4-202ENST00000557978 CDCA7LQ96GN5 454 aa21.53■■□□□ 1.04
PBX4-202ENST00000557978 SETDB2Q96T68 719 aa21.53■■□□□ 1.04
PBX4-202ENST00000557978 ARFGEF2Q9Y6D5 1785 aa21.52■■□□□ 1.04
PBX4-202ENST00000557978 AIMP1Q12904 312 aaKnown RBP21.52■■□□□ 1.04
PBX4-202ENST00000557978 TBC1D9BQ66K14 1250 aa21.52■■□□□ 1.04
PBX4-202ENST00000557978 BICDL1Q6ZP65 573 aa21.52■■□□□ 1.04
PBX4-202ENST00000557978 KLHL34Q8N239 644 aa21.52■■□□□ 1.04
PBX4-202ENST00000557978 XAGE3Q8WTP9 111 aa21.52■■□□□ 1.04
PBX4-202ENST00000557978 FHDC1Q9C0D6 1143 aaPredicted RBP21.52■■□□□ 1.04
PBX4-202ENST00000557978 POLRMTO00411 1230 aaKnown RBP21.51■■□□□ 1.03
PBX4-202ENST00000557978 TRMT2AQ8IZ69 625 aaKnown RBP21.51■■□□□ 1.03
PBX4-202ENST00000557978 ZBTB3Q9H5J0 574 aa21.51■■□□□ 1.03
PBX4-202ENST00000557978 DDR1Q08345 913 aa21.5■■□□□ 1.03
PBX4-202ENST00000557978 HLFQ16534 295 aa21.5■■□□□ 1.03
PBX4-202ENST00000557978 GIGYF2Q6Y7W6 1299 aaKnown RBP21.5■■□□□ 1.03
PBX4-202ENST00000557978 SYT17Q9BSW7 474 aa21.5■■□□□ 1.03
PBX4-202ENST00000557978 CD2APQ9Y5K6 639 aa21.5■■□□□ 1.03
PBX4-202ENST00000557978 CARMIL3Q8ND23 1372 aa21.5■■□□□ 1.03
PBX4-202ENST00000557978 SERPINB2P05120 415 aa21.49■■□□□ 1.03
PBX4-202ENST00000557978 ANKRD13DQ6ZTN6 518 aa21.49■■□□□ 1.03
PBX4-202ENST00000557978 ZBED9Q6R2W3 1325 aa21.49■■□□□ 1.03
PBX4-202ENST00000557978 SLC4A2P04920 1241 aa21.48■■□□□ 1.03
PBX4-202ENST00000557978 HSP90AB3PQ58FF7 597 aa21.48■■□□□ 1.03
PBX4-202ENST00000557978 NIP7Q9Y221 180 aaKnown RBP eCLIP21.48■■□□□ 1.03
PBX4-202ENST00000557978 PLBD2Q8NHP8 589 aa21.47■■□□□ 1.03
PBX4-202ENST00000557978 PHAXQ9H814 394 aaKnown RBP21.47■■□□□ 1.03
PBX4-202ENST00000557978 N4BP2Q86UW6 1770 aaPredicted RBP21.47■■□□□ 1.03
PBX4-202ENST00000557978 ATP10DQ9P241 1426 aa21.47■■□□□ 1.03
PBX4-202ENST00000557978 DDX58O95786 925 aaKnown RBP21.46■■□□□ 1.03
PBX4-202ENST00000557978 ZNF428Q96B54 188 aa21.46■■□□□ 1.03
PBX4-202ENST00000557978 C10orf71Q711Q0 1435 aa21.45■■□□□ 1.03
PBX4-202ENST00000557978 TCERG1O14776 1098 aaKnown RBP21.45■■□□□ 1.02
PBX4-202ENST00000557978 NPHP1O15259 732 aa21.45■■□□□ 1.02
PBX4-202ENST00000557978 CT47B1P0C2W7 299 aaPredicted RBP21.45■■□□□ 1.02
PBX4-202ENST00000557978 ANKRD31Q8N7Z5 1873 aa21.45■■□□□ 1.02
PBX4-202ENST00000557978 TPTE2Q6XPS3 522 aa21.44■■□□□ 1.02
PBX4-202ENST00000557978 RIC3Q7Z5B4 369 aa21.44■■□□□ 1.02
PBX4-202ENST00000557978 ZNF34Q8IZ26 560 aa21.44■■□□□ 1.02
PBX4-202ENST00000557978 TGFB2P61812 414 aa21.43■■□□□ 1.02
PBX4-202ENST00000557978 TCIRG1Q13488 830 aa21.43■■□□□ 1.02
PBX4-202ENST00000557978 PARP10Q53GL7 1025 aa21.43■■□□□ 1.02
PBX4-202ENST00000557978 NBPF5PQ86XG9 351 aaPredicted RBP21.43■■□□□ 1.02
PBX4-202ENST00000557978 NYXQ9GZU5 481 aa21.43■■□□□ 1.02
PBX4-202ENST00000557978 BRCA1P38398 1863 aaKnown RBP21.43■■□□□ 1.02
PBX4-202ENST00000557978 KIAA1551Q9HCM1 1747 aa21.43■■□□□ 1.02
PBX4-202ENST00000557978 CNBD1Q8NA66 436 aa21.42■■□□□ 1.02
PBX4-202ENST00000557978 GPTP24298 496 aa21.41■■□□□ 1.02
PBX4-202ENST00000557978 ST5P78524 1137 aa21.41■■□□□ 1.02
PBX4-202ENST00000557978 FLIIQ13045 1269 aa21.41■■□□□ 1.02
PBX4-202ENST00000557978 PRR5LQ6MZQ0 368 aa21.41■■□□□ 1.02
PBX4-202ENST00000557978 PPP1R42Q7Z4L9 355 aa21.41■■□□□ 1.02
PBX4-202ENST00000557978 DLEC1Q9Y238 1755 aa21.41■■□□□ 1.02
PBX4-202ENST00000557978 GTF2E1P29083 439 aaPredicted RBP21.4■■□□□ 1.02
PBX4-202ENST00000557978 KSR2Q6VAB6 950 aa21.4■■□□□ 1.02
PBX4-202ENST00000557978 NLGN2Q8NFZ4 835 aa21.4■■□□□ 1.02
PBX4-202ENST00000557978 IBTKQ9P2D0 1353 aaPredicted RBP21.4■■□□□ 1.02
PBX4-202ENST00000557978 FKBP5Q13451 457 aaPredicted RBP21.39■■□□□ 1.02
PBX4-202ENST00000557978 ALDH1L2Q3SY69 923 aa21.39■■□□□ 1.02
PBX4-202ENST00000557978 G2E3Q7L622 706 aa21.39■■□□□ 1.02
PBX4-202ENST00000557978 UBN2Q6ZU65 1347 aa21.39■■□□□ 1.01
PBX4-202ENST00000557978 PI4KAP2A4QPH2 592 aa21.38■■□□□ 1.01
PBX4-202ENST00000557978 DCAF8L1A6NGE4 600 aa21.38■■□□□ 1.01
PBX4-202ENST00000557978 FAM177BA6PVY3 158 aa21.38■■□□□ 1.01
PBX4-202ENST00000557978 PI4KAP1Q8N8J0 262 aa21.38■■□□□ 1.01
PBX4-202ENST00000557978 BRIP1Q9BX63 1249 aa21.38■■□□□ 1.01
PBX4-202ENST00000557978 PDZRN3Q9UPQ7 1066 aa21.38■■□□□ 1.01
PBX4-202ENST00000557978 GOLGB1Q14789 3259 aaKnown RBP21.38■■□□□ 1.01
PBX4-202ENST00000557978 PDE6BP35913 854 aa21.38■■□□□ 1.01
PBX4-202ENST00000557978 CACNA1SQ13698 1873 aa21.37■■□□□ 1.01
PBX4-202ENST00000557978 RNF123Q5XPI4 1314 aa21.37■■□□□ 1.01
PBX4-202ENST00000557978 NEXNQ0ZGT2 675 aa21.37■■□□□ 1.01
PBX4-202ENST00000557978 SUSD4Q5VX71 490 aa21.37■■□□□ 1.01
PBX4-202ENST00000557978 ISCA1Q9BUE6 129 aa21.37■■□□□ 1.01
PBX4-202ENST00000557978 METTL22Q9BUU2 404 aaPredicted RBP21.37■■□□□ 1.01
PBX4-202ENST00000557978 MAP3K2Q9Y2U5 619 aa21.37■■□□□ 1.01
PBX4-202ENST00000557978 PXDNLA1KZ92 1463 aa21.36■■□□□ 1.01
PBX4-202ENST00000557978 TRIM28Q13263 835 aaKnown RBP21.36■■□□□ 1.01
PBX4-202ENST00000557978 NLRP10Q86W26 655 aa21.36■■□□□ 1.01
PBX4-202ENST00000557978 UTP14AQ9BVJ6 771 aaKnown RBP21.36■■□□□ 1.01
PBX4-202ENST00000557978 ARFGEF1Q9Y6D6 1849 aa21.35■■□□□ 1.01
PBX4-202ENST00000557978 SSH1Q8WYL5 1049 aa21.35■■□□□ 1.01
PBX4-202ENST00000557978 MYD88Q99836 296 aa21.35■■□□□ 1.01
PBX4-202ENST00000557978 ADCY9O60503 1353 aa21.35■■□□□ 1.01
PBX4-202ENST00000557978 A0A0G2JLW4 131 aa21.34■■□□□ 1.01
PBX4-202ENST00000557978 ATP5J2-PTCD1G3V325 749 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms