RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 XAGE3Q8WTP9 111 aa32.88■■■□□ 2.85
SMAD6-202ENST00000557916 AIMP1Q12904 312 aaKnown RBP32.87■■■□□ 2.85
SMAD6-202ENST00000557916 STK31Q9BXU1 1019 aa32.87■■■□□ 2.85
SMAD6-202ENST00000557916 PPP1R1BQ9UD71 204 aaPredicted RBP32.87■■■□□ 2.85
SMAD6-202ENST00000557916 TCERG1O14776 1098 aaKnown RBP32.86■■■□□ 2.85
SMAD6-202ENST00000557916 SCN7AQ01118 1682 aa32.85■■■□□ 2.85
SMAD6-202ENST00000557916 MAP3K15Q6ZN16 1313 aa32.85■■■□□ 2.85
SMAD6-202ENST00000557916 ERVV-1B6SEH8 477 aa32.85■■■□□ 2.85
SMAD6-202ENST00000557916 CLEC4GQ6UXB4 293 aa32.85■■■□□ 2.85
SMAD6-202ENST00000557916 ZNF652Q9Y2D9 606 aa32.85■■■□□ 2.85
SMAD6-202ENST00000557916 TM4SF1P30408 202 aa32.84■■■□□ 2.85
SMAD6-202ENST00000557916 HLFQ16534 295 aa32.84■■■□□ 2.85
SMAD6-202ENST00000557916 ZBTB3Q9H5J0 574 aa32.84■■■□□ 2.85
SMAD6-202ENST00000557916 RGL2O15211 777 aa32.83■■■□□ 2.85
SMAD6-202ENST00000557916 NFIXQ14938 502 aa32.83■■■□□ 2.85
SMAD6-202ENST00000557916 TBC1D9BQ66K14 1250 aa32.83■■■□□ 2.85
SMAD6-202ENST00000557916 PHAXQ9H814 394 aaKnown RBP32.83■■■□□ 2.85
SMAD6-202ENST00000557916 PARP3Q9Y6F1 533 aa32.83■■■□□ 2.85
SMAD6-202ENST00000557916 BCORQ6W2J9 1755 aa32.82■■■□□ 2.84
SMAD6-202ENST00000557916 BICDL1Q6ZP65 573 aa32.82■■■□□ 2.84
SMAD6-202ENST00000557916 SLC4A2P04920 1241 aa32.81■■■□□ 2.84
SMAD6-202ENST00000557916 DDR1Q08345 913 aa32.8■■■□□ 2.84
SMAD6-202ENST00000557916 POLRMTO00411 1230 aaKnown RBP32.77■■■□□ 2.84
SMAD6-202ENST00000557916 ANKRD13DQ6ZTN6 518 aa32.77■■■□□ 2.84
SMAD6-202ENST00000557916 GIGYF2Q6Y7W6 1299 aaKnown RBP32.77■■■□□ 2.84
SMAD6-202ENST00000557916 SETDB2Q96T68 719 aa32.77■■■□□ 2.84
SMAD6-202ENST00000557916 PLBD2Q8NHP8 589 aa32.76■■■□□ 2.83
SMAD6-202ENST00000557916 CT47B1P0C2W7 299 aaPredicted RBP32.75■■■□□ 2.83
SMAD6-202ENST00000557916 NIP7Q9Y221 180 aaKnown RBP eCLIP32.75■■■□□ 2.83
SMAD6-202ENST00000557916 SERPINB2P05120 415 aa32.74■■■□□ 2.83
SMAD6-202ENST00000557916 KLHL34Q8N239 644 aa32.74■■■□□ 2.83
SMAD6-202ENST00000557916 G2E3Q7L622 706 aa32.73■■■□□ 2.83
SMAD6-202ENST00000557916 ZNF428Q96B54 188 aa32.73■■■□□ 2.83
SMAD6-202ENST00000557916 FHDC1Q9C0D6 1143 aaPredicted RBP32.73■■■□□ 2.83
SMAD6-202ENST00000557916 CARMIL3Q8ND23 1372 aa32.72■■■□□ 2.83
SMAD6-202ENST00000557916 DDX58O95786 925 aaKnown RBP32.72■■■□□ 2.83
SMAD6-202ENST00000557916 RIC3Q7Z5B4 369 aa32.71■■■□□ 2.83
SMAD6-202ENST00000557916 NUP98P52948 1817 aa32.71■■■□□ 2.83
SMAD6-202ENST00000557916 ATP10DQ9P241 1426 aa32.71■■■□□ 2.83
SMAD6-202ENST00000557916 FLIIQ13045 1269 aa32.7■■■□□ 2.83
SMAD6-202ENST00000557916 HSP90AB3PQ58FF7 597 aa32.7■■■□□ 2.83
SMAD6-202ENST00000557916 GPTP24298 496 aa32.69■■■□□ 2.82
SMAD6-202ENST00000557916 ZNF34Q8IZ26 560 aa32.69■■■□□ 2.82
SMAD6-202ENST00000557916 YTHDC1Q96MU7 727 aaKnown RBP32.69■■■□□ 2.82
SMAD6-202ENST00000557916 TCIRG1Q13488 830 aa32.68■■■□□ 2.82
SMAD6-202ENST00000557916 SSH1Q8WYL5 1049 aa32.68■■■□□ 2.82
SMAD6-202ENST00000557916 CD2APQ9Y5K6 639 aa32.68■■■□□ 2.82
SMAD6-202ENST00000557916 ALDH1L2Q3SY69 923 aa32.67■■■□□ 2.82
SMAD6-202ENST00000557916 NBPF5PQ86XG9 351 aaPredicted RBP32.67■■■□□ 2.82
SMAD6-202ENST00000557916 SYT17Q9BSW7 474 aa32.67■■■□□ 2.82
SMAD6-202ENST00000557916 CACNA1FO60840 1977 aa32.66■■■□□ 2.82
SMAD6-202ENST00000557916 KSR2Q6VAB6 950 aa32.66■■■□□ 2.82
SMAD6-202ENST00000557916 MRPL50Q8N5N7 158 aaKnown RBP32.66■■■□□ 2.82
SMAD6-202ENST00000557916 PI4KAP2A4QPH2 592 aa32.65■■■□□ 2.82
SMAD6-202ENST00000557916 FAM177BA6PVY3 158 aa32.65■■■□□ 2.82
SMAD6-202ENST00000557916 FKBP5Q13451 457 aaPredicted RBP32.65■■■□□ 2.82
SMAD6-202ENST00000557916 PI4KAP1Q8N8J0 262 aa32.65■■■□□ 2.82
SMAD6-202ENST00000557916 UBN2Q6ZU65 1347 aa32.65■■■□□ 2.82
SMAD6-202ENST00000557916 NPHP1O15259 732 aa32.64■■■□□ 2.82
SMAD6-202ENST00000557916 BCL2L13Q9BXK5 485 aa32.64■■■□□ 2.82
SMAD6-202ENST00000557916 MAP3K2Q9Y2U5 619 aa32.64■■■□□ 2.82
SMAD6-202ENST00000557916 C10orf71Q711Q0 1435 aa32.64■■■□□ 2.82
SMAD6-202ENST00000557916 PARP10Q53GL7 1025 aa32.63■■■□□ 2.81
SMAD6-202ENST00000557916 PRR5LQ6MZQ0 368 aa32.63■■■□□ 2.81
SMAD6-202ENST00000557916 CNBD1Q8NA66 436 aa32.63■■■□□ 2.81
SMAD6-202ENST00000557916 AFDNP55196 1824 aaKnown RBP32.63■■■□□ 2.81
SMAD6-202ENST00000557916 NRXN2Q9P2S2 1712 aa32.62■■■□□ 2.81
SMAD6-202ENST00000557916 TPTE2Q6XPS3 522 aa32.62■■■□□ 2.81
SMAD6-202ENST00000557916 SMC4Q9NTJ3 1288 aa32.62■■■□□ 2.81
SMAD6-202ENST00000557916 ADCY9O60503 1353 aa32.61■■■□□ 2.81
SMAD6-202ENST00000557916 SUSD4Q5VX71 490 aa32.61■■■□□ 2.81
SMAD6-202ENST00000557916 METTL22Q9BUU2 404 aaPredicted RBP32.61■■■□□ 2.81
SMAD6-202ENST00000557916 ATP5J2-PTCD1G3V325 749 aa32.6■■■□□ 2.81
SMAD6-202ENST00000557916 RARSP54136 660 aaKnown RBP32.6■■■□□ 2.81
SMAD6-202ENST00000557916 MYD88Q99836 296 aa32.6■■■□□ 2.81
SMAD6-202ENST00000557916 ARFGEF2Q9Y6D5 1785 aa32.6■■■□□ 2.81
SMAD6-202ENST00000557916 PPP1R42Q7Z4L9 355 aa32.6■■■□□ 2.81
SMAD6-202ENST00000557916 NLRP10Q86W26 655 aa32.6■■■□□ 2.81
SMAD6-202ENST00000557916 CCDC24Q8N4L8 307 aa32.6■■■□□ 2.81
SMAD6-202ENST00000557916 NLGN2Q8NFZ4 835 aa32.6■■■□□ 2.81
SMAD6-202ENST00000557916 ISCA1Q9BUE6 129 aa32.6■■■□□ 2.81
SMAD6-202ENST00000557916 NYXQ9GZU5 481 aa32.6■■■□□ 2.81
SMAD6-202ENST00000557916 GTF2E1P29083 439 aaPredicted RBP32.59■■■□□ 2.81
SMAD6-202ENST00000557916 ST5P78524 1137 aa32.59■■■□□ 2.81
SMAD6-202ENST00000557916 ANKRD36CQ5JPF3 1778 aa32.58■■■□□ 2.81
SMAD6-202ENST00000557916 TRIM28Q13263 835 aaKnown RBP32.57■■■□□ 2.8
SMAD6-202ENST00000557916 DNAAF4Q8WXU2 420 aa32.57■■■□□ 2.8
SMAD6-202ENST00000557916 NTSR2O95665 410 aa32.56■■■□□ 2.8
SMAD6-202ENST00000557916 TGFB2P61812 414 aa32.56■■■□□ 2.8
SMAD6-202ENST00000557916 NEXNQ0ZGT2 675 aa32.56■■■□□ 2.8
SMAD6-202ENST00000557916 UTP14AQ9BVJ6 771 aaKnown RBP32.56■■■□□ 2.8
SMAD6-202ENST00000557916 IBTKQ9P2D0 1353 aaPredicted RBP32.56■■■□□ 2.8
SMAD6-202ENST00000557916 NUTM1Q86Y26 1132 aa32.55■■■□□ 2.8
SMAD6-202ENST00000557916 KIF13BQ9NQT8 1826 aa32.55■■■□□ 2.8
SMAD6-202ENST00000557916 BRIP1Q9BX63 1249 aa32.54■■■□□ 2.8
SMAD6-202ENST00000557916 F6X3S4 739 aa32.53■■■□□ 2.8
SMAD6-202ENST00000557916 PTPRCP08575 1304 aa32.53■■■□□ 2.8
SMAD6-202ENST00000557916 BRPF1P55201 1214 aaPredicted RBP32.52■■■□□ 2.8
SMAD6-202ENST00000557916 ERFEQ4G0M1 354 aa32.52■■■□□ 2.8
SMAD6-202ENST00000557916 TRMT112Q9UI30 125 aaKnown RBP32.52■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms