RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 SF3B2Q13435 895 aaKnown RBP11.87□□□□□ -0.51
CHD8-214ENST00000557727 NEUROD2Q15784 382 aa11.87□□□□□ -0.51
CHD8-214ENST00000557727 CCDC27Q2M243 656 aa11.87□□□□□ -0.51
CHD8-214ENST00000557727 STK24Q9Y6E0 443 aa11.87□□□□□ -0.51
CHD8-214ENST00000557727 HEG1Q9ULI3 1381 aa11.87□□□□□ -0.51
CHD8-214ENST00000557727 CASZ1Q86V15 1759 aa11.87□□□□□ -0.51
CHD8-214ENST00000557727 ZNF853P0CG23 659 aa11.86□□□□□ -0.51
CHD8-214ENST00000557727 ITPK1Q13572 414 aa11.86□□□□□ -0.51
CHD8-214ENST00000557727 GPR153Q6NV75 609 aa11.86□□□□□ -0.51
CHD8-214ENST00000557727 RTF1Q92541 710 aaKnown RBP11.86□□□□□ -0.51
CHD8-214ENST00000557727 LOC102724428A0A0B4J2F2 783 aa11.85□□□□□ -0.51
CHD8-214ENST00000557727 ECM2O94769 699 aaPredicted RBP11.85□□□□□ -0.51
CHD8-214ENST00000557727 SIK1P57059 783 aa11.85□□□□□ -0.51
CHD8-214ENST00000557727 LMOD3Q0VAK6 560 aa11.85□□□□□ -0.51
CHD8-214ENST00000557727 TEFQ10587 303 aa11.85□□□□□ -0.51
CHD8-214ENST00000557727 TAF7Q15545 349 aaPredicted RBP11.85□□□□□ -0.51
CHD8-214ENST00000557727 ZNF790Q6PG37 636 aa11.85□□□□□ -0.51
CHD8-214ENST00000557727 WWC1Q8IX03 1113 aa11.85□□□□□ -0.51
CHD8-214ENST00000557727 SMARCC1Q92922 1105 aaPredicted RBP11.85□□□□□ -0.51
CHD8-214ENST00000557727 ANO8Q9HCE9 1232 aaPredicted RBP11.85□□□□□ -0.51
CHD8-214ENST00000557727 C4AP0C0L4 1744 aa11.85□□□□□ -0.51
CHD8-214ENST00000557727 COL24A1Q17RW2 1714 aa11.84□□□□□ -0.51
CHD8-214ENST00000557727 CHL1O00533 1208 aa11.84□□□□□ -0.51
CHD8-214ENST00000557727 SLC27A3Q5K4L6 730 aa11.84□□□□□ -0.51
CHD8-214ENST00000557727 ZNF496Q96IT1 587 aaPredicted RBP11.84□□□□□ -0.51
CHD8-214ENST00000557727 MIS18AQ9NYP9 233 aa11.84□□□□□ -0.51
CHD8-214ENST00000557727 BTBD11A6QL63 1104 aa11.83□□□□□ -0.52
CHD8-214ENST00000557727 ZNF827Q17R98 1081 aa11.83□□□□□ -0.52
CHD8-214ENST00000557727 LINC00116Q8NCU8 138 aa11.83□□□□□ -0.52
CHD8-214ENST00000557727 MFRPQ9BY79 579 aa11.83□□□□□ -0.52
CHD8-214ENST00000557727 CCNL1Q9UK58 526 aaPredicted RBP11.83□□□□□ -0.52
CHD8-214ENST00000557727 STK25O00506 426 aa11.82□□□□□ -0.52
CHD8-214ENST00000557727 PTCD1O75127 700 aaKnown RBP11.82□□□□□ -0.52
CHD8-214ENST00000557727 VARS2Q5ST30 1063 aaKnown RBP11.82□□□□□ -0.52
CHD8-214ENST00000557727 AMIGO3Q86WK7 504 aa11.82□□□□□ -0.52
CHD8-214ENST00000557727 BABAM1Q9NWV8 329 aa11.82□□□□□ -0.52
CHD8-214ENST00000557727 PRAMEF22A3QJZ6 481 aa11.81□□□□□ -0.52
CHD8-214ENST00000557727 EIF4A1P60842 406 aaKnown RBP11.81□□□□□ -0.52
CHD8-214ENST00000557727 VSIG10Q8N0Z9 540 aa11.81□□□□□ -0.52
CHD8-214ENST00000557727 NGEFQ8N5V2 710 aa11.81□□□□□ -0.52
CHD8-214ENST00000557727 CFAP44Q96MT7 982 aa11.81□□□□□ -0.52
CHD8-214ENST00000557727 ATP6V1AP38606 617 aa11.8□□□□□ -0.52
CHD8-214ENST00000557727 DNAJC10Q8IXB1 793 aa11.8□□□□□ -0.52
CHD8-214ENST00000557727 MBIPQ9NS73 344 aa11.8□□□□□ -0.52
CHD8-214ENST00000557727 IFT57Q9NWB7 429 aa11.8□□□□□ -0.52
CHD8-214ENST00000557727 IL16Q14005 1332 aa11.8□□□□□ -0.52
CHD8-214ENST00000557727 CYP19A1P11511 503 aaPredicted RBP11.79□□□□□ -0.52
CHD8-214ENST00000557727 KRT24Q2M2I5 525 aa11.79□□□□□ -0.52
CHD8-214ENST00000557727 ZNF687Q8N1G0 1237 aa11.79□□□□□ -0.52
CHD8-214ENST00000557727 FMNL2Q96PY5 1086 aa11.79□□□□□ -0.52
CHD8-214ENST00000557727 TSPYL4Q9UJ04 414 aa11.79□□□□□ -0.52
CHD8-214ENST00000557727 SALL2Q9Y467 1007 aaPredicted RBP11.79□□□□□ -0.52
CHD8-214ENST00000557727 CNTNAP4Q9C0A0 1308 aa11.79□□□□□ -0.52
CHD8-214ENST00000557727 CACNA1FO60840 1977 aa11.78□□□□□ -0.52
CHD8-214ENST00000557727 BCORQ6W2J9 1755 aa11.78□□□□□ -0.52
CHD8-214ENST00000557727 GIGYF1O75420 1035 aaPredicted RBP11.78□□□□□ -0.52
CHD8-214ENST00000557727 SLC15A2Q16348 729 aa11.78□□□□□ -0.52
CHD8-214ENST00000557727 INTS5Q6P9B9 1019 aaKnown RBP11.78□□□□□ -0.52
CHD8-214ENST00000557727 WDR63Q8IWG1 891 aa11.78□□□□□ -0.52
CHD8-214ENST00000557727 TTC5Q8N0Z6 440 aa11.78□□□□□ -0.52
CHD8-214ENST00000557727 PDGFDQ9GZP0 370 aaPredicted RBP11.78□□□□□ -0.52
CHD8-214ENST00000557727 SMIM5Q71RC9 77 aa11.77□□□□□ -0.53
CHD8-214ENST00000557727 TSR2Q969E8 191 aaKnown RBP11.77□□□□□ -0.53
CHD8-214ENST00000557727 USP16Q9Y5T5 823 aa11.77□□□□□ -0.53
CHD8-214ENST00000557727 PNPLA7Q6ZV29 1317 aa11.77□□□□□ -0.53
CHD8-214ENST00000557727 SCN7AQ01118 1682 aa11.77□□□□□ -0.53
CHD8-214ENST00000557727 KIF3CO14782 793 aa11.76□□□□□ -0.53
CHD8-214ENST00000557727 SNRPA1P09661 255 aaKnown RBP11.76□□□□□ -0.53
CHD8-214ENST00000557727 CRKLP46109 303 aaKnown RBP11.76□□□□□ -0.53
CHD8-214ENST00000557727 GNAI1P63096 354 aa11.76□□□□□ -0.53
CHD8-214ENST00000557727 ARSIQ5FYB1 569 aa11.76□□□□□ -0.53
CHD8-214ENST00000557727 RC3H1Q5TC82 1133 aaKnown RBP11.76□□□□□ -0.53
CHD8-214ENST00000557727 FANCIQ9NVI1 1328 aa11.76□□□□□ -0.53
CHD8-214ENST00000557727 RGL2O15211 777 aa11.75□□□□□ -0.53
CHD8-214ENST00000557727 CALD1Q05682 793 aaKnown RBP11.75□□□□□ -0.53
CHD8-214ENST00000557727 TRMT2AQ8IZ69 625 aaKnown RBP11.75□□□□□ -0.53
CHD8-214ENST00000557727 ZBTB1Q9Y2K1 713 aa11.75□□□□□ -0.53
CHD8-214ENST00000557727 LAS1LQ9Y4W2 734 aaKnown RBP11.75□□□□□ -0.53
CHD8-214ENST00000557727 PSDA5PKW4 1024 aaPredicted RBP11.74□□□□□ -0.53
CHD8-214ENST00000557727 NBPF26B4DH59 902 aa11.74□□□□□ -0.53
CHD8-214ENST00000557727 A1BGP04217 495 aa11.74□□□□□ -0.53
CHD8-214ENST00000557727 R3HDM1Q15032 1099 aaKnown RBP11.74□□□□□ -0.53
CHD8-214ENST00000557727 NBPF14Q5TI25 921 aa11.74□□□□□ -0.53
CHD8-214ENST00000557727 NBPF10Q6P3W6 841 aaKnown RBP11.74□□□□□ -0.53
CHD8-214ENST00000557727 LRP10Q7Z4F1 713 aa11.74□□□□□ -0.53
CHD8-214ENST00000557727 NBPF15Q8N660 670 aa11.74□□□□□ -0.53
CHD8-214ENST00000557727 TSPYL6Q8N831 410 aa11.74□□□□□ -0.53
CHD8-214ENST00000557727 C8orf58Q8NAV2 365 aa11.74□□□□□ -0.53
CHD8-214ENST00000557727 CDCA7LQ96GN5 454 aa11.74□□□□□ -0.53
CHD8-214ENST00000557727 CCDC87Q9NVE4 849 aa11.74□□□□□ -0.53
CHD8-214ENST00000557727 STK32BQ9NY57 414 aa11.74□□□□□ -0.53
CHD8-214ENST00000557727 SOS1Q07889 1333 aaPredicted RBP11.74□□□□□ -0.53
CHD8-214ENST00000557727 NUP98P52948 1817 aa11.74□□□□□ -0.53
CHD8-214ENST00000557727 RPS6KA4O75676 772 aa11.73□□□□□ -0.53
CHD8-214ENST00000557727 SLFN5Q08AF3 891 aa11.73□□□□□ -0.53
CHD8-214ENST00000557727 PDIA6Q15084 440 aa11.73□□□□□ -0.53
CHD8-214ENST00000557727 COL23A1Q86Y22 540 aaPredicted RBP11.73□□□□□ -0.53
CHD8-214ENST00000557727 TEX13AQ9BXU3 409 aaPredicted RBP11.73□□□□□ -0.53
CHD8-214ENST00000557727 LRP5O75197 1615 aa11.72□□□□□ -0.53
CHD8-214ENST00000557727 GNPATO15228 680 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms