RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 ADCY9O60503 1353 aa11.38□□□□□ -0.59
RD3L-201ENST00000557640 ANKRD36BQ8N2N9 1353 aa11.38□□□□□ -0.59
RD3L-201ENST00000557640 GIGYF1O75420 1035 aaPredicted RBP11.37□□□□□ -0.59
RD3L-201ENST00000557640 APLP1P51693 650 aa11.37□□□□□ -0.59
RD3L-201ENST00000557640 GPR162Q16538 588 aa11.37□□□□□ -0.59
RD3L-201ENST00000557640 CICQ96RK0 1608 aaPredicted RBP11.36□□□□□ -0.59
RD3L-201ENST00000557640 ANKRD26Q9UPS8 1709 aa11.36□□□□□ -0.59
RD3L-201ENST00000557640 FBLN1P23142 703 aa11.36□□□□□ -0.59
RD3L-201ENST00000557640 C3orf80F5H4A9 247 aa11.35□□□□□ -0.59
RD3L-201ENST00000557640 MSL1Q68DK7 614 aa11.35□□□□□ -0.59
RD3L-201ENST00000557640 AMIGO3Q86WK7 504 aa11.35□□□□□ -0.59
RD3L-201ENST00000557640 SLC12A5Q9H2X9 1139 aa11.35□□□□□ -0.59
RD3L-201ENST00000557640 KIF13BQ9NQT8 1826 aa11.35□□□□□ -0.59
RD3L-201ENST00000557640 COPS2P61201 443 aa11.34□□□□□ -0.59
RD3L-201ENST00000557640 SLC27A3Q5K4L6 730 aa11.34□□□□□ -0.59
RD3L-201ENST00000557640 DDX54Q8TDD1 881 aaKnown RBP11.34□□□□□ -0.59
RD3L-201ENST00000557640 LTV1Q96GA3 475 aaPredicted RBP11.34□□□□□ -0.59
RD3L-201ENST00000557640 MAP3K19Q56UN5 1328 aa11.34□□□□□ -0.59
RD3L-201ENST00000557640 PRIM1P49642 420 aaKnown RBP11.33□□□□□ -0.6
RD3L-201ENST00000557640 COL23A1Q86Y22 540 aaPredicted RBP11.33□□□□□ -0.6
RD3L-201ENST00000557640 SLC16A10Q8TF71 515 aa11.33□□□□□ -0.6
RD3L-201ENST00000557640 BRCA1P38398 1863 aaKnown RBP11.33□□□□□ -0.6
RD3L-201ENST00000557640 N4BP2Q86UW6 1770 aaPredicted RBP11.33□□□□□ -0.6
RD3L-201ENST00000557640 NUDT18Q6ZVK8 323 aa11.32□□□□□ -0.6
RD3L-201ENST00000557640 IP6K1Q92551 441 aa11.32□□□□□ -0.6
RD3L-201ENST00000557640 SYTL4Q96C24 671 aaPredicted RBP11.32□□□□□ -0.6
RD3L-201ENST00000557640 TFCP2L1Q9NZI6 479 aa11.32□□□□□ -0.6
RD3L-201ENST00000557640 POLD1P28340 1107 aa11.31□□□□□ -0.6
RD3L-201ENST00000557640 HOXC9P31274 260 aa11.31□□□□□ -0.6
RD3L-201ENST00000557640 PDIA6Q15084 440 aa11.31□□□□□ -0.6
RD3L-201ENST00000557640 SMIM5Q71RC9 77 aa11.31□□□□□ -0.6
RD3L-201ENST00000557640 USHBP1Q8N6Y0 703 aa11.31□□□□□ -0.6
RD3L-201ENST00000557640 TMUB1Q9BVT8 246 aa11.31□□□□□ -0.6
RD3L-201ENST00000557640 C4AP0C0L4 1744 aa11.3□□□□□ -0.6
RD3L-201ENST00000557640 SPDYE16A6NNV3 312 aaPredicted RBP11.3□□□□□ -0.6
RD3L-201ENST00000557640 TMC1Q8TDI8 760 aa11.3□□□□□ -0.6
RD3L-201ENST00000557640 NECTIN2Q92692 538 aa11.3□□□□□ -0.6
RD3L-201ENST00000557640 CCNL1Q9UK58 526 aaPredicted RBP11.3□□□□□ -0.6
RD3L-201ENST00000557640 RTL1A6NKG5 1358 aa11.29□□□□□ -0.6
RD3L-201ENST00000557640 COL5A3P25940 1745 aaPredicted RBP11.29□□□□□ -0.6
RD3L-201ENST00000557640 NEUROD1Q13562 356 aa11.29□□□□□ -0.6
RD3L-201ENST00000557640 PKDCCQ504Y2 493 aa11.29□□□□□ -0.6
RD3L-201ENST00000557640 WWC3Q9ULE0 1092 aa11.29□□□□□ -0.6
RD3L-201ENST00000557640 GRXCR2A6NFK2 248 aa11.28□□□□□ -0.6
RD3L-201ENST00000557640 TESK2Q96S53 571 aa11.28□□□□□ -0.6
RD3L-201ENST00000557640 PALLDQ8WX93 1383 aa11.28□□□□□ -0.6
RD3L-201ENST00000557640 NCAPD2Q15021 1401 aa11.27□□□□□ -0.6
RD3L-201ENST00000557640 SLC19A1P41440 591 aa11.27□□□□□ -0.61
RD3L-201ENST00000557640 RRS1Q15050 365 aaKnown RBP11.27□□□□□ -0.61
RD3L-201ENST00000557640 NBPF6Q5VWK0 638 aa11.27□□□□□ -0.61
RD3L-201ENST00000557640 HDGFL2Q7Z4V5 671 aaPredicted RBP11.27□□□□□ -0.61
RD3L-201ENST00000557640 ZCRB1Q8TBF4 217 aaKnown RBP11.27□□□□□ -0.61
RD3L-201ENST00000557640 NBPF4Q96M43 638 aa11.27□□□□□ -0.61
RD3L-201ENST00000557640 CARD11Q9BXL7 1154 aa11.27□□□□□ -0.61
RD3L-201ENST00000557640 USP47Q96K76 1375 aa11.27□□□□□ -0.61
RD3L-201ENST00000557640 WDR90Q96KV7 1748 aa11.26□□□□□ -0.61
RD3L-201ENST00000557640 ZNF526Q8TF50 670 aaPredicted RBP11.26□□□□□ -0.61
RD3L-201ENST00000557640 ZPR1O75312 459 aa11.25□□□□□ -0.61
RD3L-201ENST00000557640 SWT1Q5T5J6 900 aaKnown RBP11.25□□□□□ -0.61
RD3L-201ENST00000557640 TRIM67Q6ZTA4 783 aa11.25□□□□□ -0.61
RD3L-201ENST00000557640 SLF2Q8IX21 1173 aa11.25□□□□□ -0.61
RD3L-201ENST00000557640 PXDNLA1KZ92 1463 aa11.25□□□□□ -0.61
RD3L-201ENST00000557640 ARFGEF1Q9Y6D6 1849 aa11.24□□□□□ -0.61
RD3L-201ENST00000557640 CYP27B1O15528 508 aa11.24□□□□□ -0.61
RD3L-201ENST00000557640 TERF2IPQ9NYB0 399 aa11.24□□□□□ -0.61
RD3L-201ENST00000557640 MYH14Q7Z406 1995 aaKnown RBP11.24□□□□□ -0.61
RD3L-201ENST00000557640 IGSF1Q8N6C5 1336 aa11.24□□□□□ -0.61
RD3L-201ENST00000557640 GRIN3BO60391 1043 aa11.23□□□□□ -0.61
RD3L-201ENST00000557640 DGAT1O75907 488 aa11.23□□□□□ -0.61
RD3L-201ENST00000557640 SLC4A3P48751 1232 aa11.23□□□□□ -0.61
RD3L-201ENST00000557640 ZNF831Q5JPB2 1677 aa11.23□□□□□ -0.61
RD3L-201ENST00000557640 POTECB2RU33 542 aa11.22□□□□□ -0.61
RD3L-201ENST00000557640 HSPA6P17066 643 aa11.22□□□□□ -0.61
RD3L-201ENST00000557640 AMPHP49418 695 aa11.22□□□□□ -0.61
RD3L-201ENST00000557640 COG3Q96JB2 828 aa11.22□□□□□ -0.61
RD3L-201ENST00000557640 GPBP1L1Q9HC44 474 aaPredicted RBP11.22□□□□□ -0.61
RD3L-201ENST00000557640 ADAMTS7Q9UKP4 1686 aa11.22□□□□□ -0.61
RD3L-201ENST00000557640 CD2APQ9Y5K6 639 aa11.22□□□□□ -0.61
RD3L-201ENST00000557640 PCNTO95613 3336 aa11.22□□□□□ -0.61
RD3L-201ENST00000557640 TJP1Q07157 1748 aa11.21□□□□□ -0.61
RD3L-201ENST00000557640 INSRP06213 1382 aa11.21□□□□□ -0.61
RD3L-201ENST00000557640 KDRP35968 1356 aa11.21□□□□□ -0.61
RD3L-201ENST00000557640 PCDH11XQ9BZA7 1347 aa11.21□□□□□ -0.61
RD3L-201ENST00000557640 PCDH11YQ9BZA8 1340 aa11.21□□□□□ -0.61
RD3L-201ENST00000557640 RNF223E7ERA6 249 aa11.21□□□□□ -0.61
RD3L-201ENST00000557640 HSP90AB2PQ58FF8 381 aa11.21□□□□□ -0.61
RD3L-201ENST00000557640 LINC00116Q8NCU8 138 aa11.21□□□□□ -0.61
RD3L-201ENST00000557640 GGNBP2Q9H3C7 697 aa11.21□□□□□ -0.61
RD3L-201ENST00000557640 CDHR5Q9HBB8 845 aa11.21□□□□□ -0.61
RD3L-201ENST00000557640 C10orf71Q711Q0 1435 aa11.2□□□□□ -0.62
RD3L-201ENST00000557640 SMG6Q86US8 1419 aaKnown RBP11.2□□□□□ -0.62
RD3L-201ENST00000557640 FLT4P35916 1363 aa11.2□□□□□ -0.62
RD3L-201ENST00000557640 FYB1O15117 783 aa11.2□□□□□ -0.62
RD3L-201ENST00000557640 SBF1O95248 1867 aa11.19□□□□□ -0.62
RD3L-201ENST00000557640 VIRMAQ69YN4 1812 aaKnown RBP11.19□□□□□ -0.62
RD3L-201ENST00000557640 ST20-MTHFSA0A0A6YYL1 179 aa11.19□□□□□ -0.62
RD3L-201ENST00000557640 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.19□□□□□ -0.62
RD3L-201ENST00000557640 ITPK1Q13572 414 aa11.19□□□□□ -0.62
RD3L-201ENST00000557640 MPRIPQ6WCQ1 1025 aa11.19□□□□□ -0.62
RD3L-201ENST00000557640 PUS7Q96PZ0 661 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms