RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 RAPGEF3O95398 923 aa7.53□□□□□ -1.2
MTHFD1-216ENST00000557539 MTMR3Q13615 1198 aa7.53□□□□□ -1.2
MTHFD1-216ENST00000557539 ZNF772Q68DY9 489 aaPredicted RBP7.53□□□□□ -1.2
MTHFD1-216ENST00000557539 VASH1Q7L8A9 365 aaPredicted RBP7.53□□□□□ -1.2
MTHFD1-216ENST00000557539 FBXO33Q7Z6M2 555 aa7.53□□□□□ -1.2
MTHFD1-216ENST00000557539 PCDHB11Q9Y5F2 797 aa7.53□□□□□ -1.2
MTHFD1-216ENST00000557539 DNMT3AQ9Y6K1 912 aaPredicted RBP7.53□□□□□ -1.2
MTHFD1-216ENST00000557539 TTC37Q6PGP7 1564 aa7.53□□□□□ -1.2
MTHFD1-216ENST00000557539 MAGI3Q5TCQ9 1506 aa7.52□□□□□ -1.2
MTHFD1-216ENST00000557539 ALKQ9UM73 1620 aa7.52□□□□□ -1.2
MTHFD1-216ENST00000557539 FKBP4Q02790 459 aaKnown RBP eCLIP7.52□□□□□ -1.21
MTHFD1-216ENST00000557539 USP4Q13107 963 aa7.52□□□□□ -1.21
MTHFD1-216ENST00000557539 SCARF1Q14162 830 aa7.52□□□□□ -1.21
MTHFD1-216ENST00000557539 CAPN12Q6ZSI9 719 aa7.52□□□□□ -1.21
MTHFD1-216ENST00000557539 ZSCAN29Q8IWY8 852 aaPredicted RBP7.52□□□□□ -1.21
MTHFD1-216ENST00000557539 ASB16Q96NS5 453 aa7.52□□□□□ -1.21
MTHFD1-216ENST00000557539 LRRC7Q96NW7 1537 aa7.52□□□□□ -1.21
MTHFD1-216ENST00000557539 VAMP1P23763 118 aa7.51□□□□□ -1.21
MTHFD1-216ENST00000557539 MEIOBQ8N635 442 aa7.51□□□□□ -1.21
MTHFD1-216ENST00000557539 TSEN2Q8NCE0 465 aaKnown RBP7.51□□□□□ -1.21
MTHFD1-216ENST00000557539 SLC10A4Q96EP9 437 aa7.51□□□□□ -1.21
MTHFD1-216ENST00000557539 ARAP3Q8WWN8 1544 aa7.51□□□□□ -1.21
MTHFD1-216ENST00000557539 ERBB4Q15303 1308 aa7.51□□□□□ -1.21
MTHFD1-216ENST00000557539 H3BM21 787 aa7.5□□□□□ -1.21
MTHFD1-216ENST00000557539 SF3B2Q13435 895 aaKnown RBP7.5□□□□□ -1.21
MTHFD1-216ENST00000557539 FKBP5Q13451 457 aaPredicted RBP7.5□□□□□ -1.21
MTHFD1-216ENST00000557539 ECM1Q16610 540 aa7.5□□□□□ -1.21
MTHFD1-216ENST00000557539 C6orf118Q5T5N4 469 aa7.5□□□□□ -1.21
MTHFD1-216ENST00000557539 NPAS3Q8IXF0 933 aa7.5□□□□□ -1.21
MTHFD1-216ENST00000557539 CCDC116Q8IYX3 515 aa7.5□□□□□ -1.21
MTHFD1-216ENST00000557539 GAS2L2Q8NHY3 880 aa7.5□□□□□ -1.21
MTHFD1-216ENST00000557539 CUX1P39880 1505 aa7.49□□□□□ -1.21
MTHFD1-216ENST00000557539 CUL7Q14999 1698 aa7.49□□□□□ -1.21
MTHFD1-216ENST00000557539 PTCD1O75127 700 aaKnown RBP7.49□□□□□ -1.21
MTHFD1-216ENST00000557539 WEE1P30291 646 aa7.49□□□□□ -1.21
MTHFD1-216ENST00000557539 GMPRP36959 345 aa7.49□□□□□ -1.21
MTHFD1-216ENST00000557539 ARHGAP4P98171 946 aa7.49□□□□□ -1.21
MTHFD1-216ENST00000557539 NAA30Q147X3 362 aaPredicted RBP7.49□□□□□ -1.21
MTHFD1-216ENST00000557539 NBPF20Q3BBV1 942 aa7.49□□□□□ -1.21
MTHFD1-216ENST00000557539 EAPPQ56P03 285 aaPredicted RBP7.49□□□□□ -1.21
MTHFD1-216ENST00000557539 COL13A1Q5TAT6 717 aaPredicted RBP7.49□□□□□ -1.21
MTHFD1-216ENST00000557539 TNS4Q8IZW8 715 aa7.49□□□□□ -1.21
MTHFD1-216ENST00000557539 LINC00528Q8N1L1 170 aa7.49□□□□□ -1.21
MTHFD1-216ENST00000557539 BCL11AQ9H165 835 aa7.49□□□□□ -1.21
MTHFD1-216ENST00000557539 RECKO95980 971 aa7.48□□□□□ -1.21
MTHFD1-216ENST00000557539 LORP23490 312 aaPredicted RBP7.48□□□□□ -1.21
MTHFD1-216ENST00000557539 RAB15P59190 212 aa7.48□□□□□ -1.21
MTHFD1-216ENST00000557539 TSNAXIP1Q2TAA8 658 aa7.48□□□□□ -1.21
MTHFD1-216ENST00000557539 PPP1R26Q5T8A7 1209 aaPredicted RBP7.48□□□□□ -1.21
MTHFD1-216ENST00000557539 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.48□□□□□ -1.21
MTHFD1-216ENST00000557539 SLC16A10Q8TF71 515 aa7.48□□□□□ -1.21
MTHFD1-216ENST00000557539 FER1L4A9Z1Z3 1794 aa7.48□□□□□ -1.21
MTHFD1-216ENST00000557539 CDK12Q9NYV4 1490 aaPredicted RBP7.48□□□□□ -1.21
MTHFD1-216ENST00000557539 BMP2P12643 396 aa7.47□□□□□ -1.21
MTHFD1-216ENST00000557539 INSM1Q01101 510 aaPredicted RBP7.47□□□□□ -1.21
MTHFD1-216ENST00000557539 CBLBQ13191 982 aa7.47□□□□□ -1.21
MTHFD1-216ENST00000557539 RGL4Q8IZJ4 473 aa7.47□□□□□ -1.21
MTHFD1-216ENST00000557539 C8orf37Q96NL8 207 aa7.47□□□□□ -1.21
MTHFD1-216ENST00000557539 KCTD15Q96SI1 283 aaPredicted RBP7.47□□□□□ -1.21
MTHFD1-216ENST00000557539 EMILIN1Q9Y6C2 1016 aa7.47□□□□□ -1.21
MTHFD1-216ENST00000557539 SOS2Q07890 1332 aaPredicted RBP7.47□□□□□ -1.21
MTHFD1-216ENST00000557539 PTPRGP23470 1445 aa7.46□□□□□ -1.21
MTHFD1-216ENST00000557539 ESPNB1AK53 854 aa7.46□□□□□ -1.22
MTHFD1-216ENST00000557539 M0R2N6 131 aa7.46□□□□□ -1.22
MTHFD1-216ENST00000557539 MYCP01106 439 aaPredicted RBP7.46□□□□□ -1.22
MTHFD1-216ENST00000557539 COL19A1Q14993 1142 aa7.46□□□□□ -1.22
MTHFD1-216ENST00000557539 HELQQ8TDG4 1101 aa7.46□□□□□ -1.22
MTHFD1-216ENST00000557539 DRC1Q96MC2 740 aa7.46□□□□□ -1.22
MTHFD1-216ENST00000557539 SETD1BQ9UPS6 1966 aaKnown RBP7.46□□□□□ -1.22
MTHFD1-216ENST00000557539 FANCAO15360 1455 aa7.45□□□□□ -1.22
MTHFD1-216ENST00000557539 ZC3H6P61129 1189 aaKnown RBP7.45□□□□□ -1.22
MTHFD1-216ENST00000557539 INTS6LQ5JSJ4 861 aaKnown RBP7.45□□□□□ -1.22
MTHFD1-216ENST00000557539 Q6ZVU0 165 aa7.45□□□□□ -1.22
MTHFD1-216ENST00000557539 SEPT12Q8IYM1 358 aa7.45□□□□□ -1.22
MTHFD1-216ENST00000557539 SREK1Q8WXA9 508 aaKnown RBP7.45□□□□□ -1.22
MTHFD1-216ENST00000557539 IRF7Q92985 503 aa7.45□□□□□ -1.22
MTHFD1-216ENST00000557539 ZNF358Q9NW07 568 aa7.45□□□□□ -1.22
MTHFD1-216ENST00000557539 DNMT3LQ9UJW3 386 aa7.45□□□□□ -1.22
MTHFD1-216ENST00000557539 CPS1P31327 1500 aa7.45□□□□□ -1.22
MTHFD1-216ENST00000557539 CAMSAP1Q5T5Y3 1602 aa7.45□□□□□ -1.22
MTHFD1-216ENST00000557539 FGD5Q6ZNL6 1462 aa7.44□□□□□ -1.22
MTHFD1-216ENST00000557539 MAN1A2O60476 641 aa7.44□□□□□ -1.22
MTHFD1-216ENST00000557539 HMGB1P09429 215 aaKnown RBP7.44□□□□□ -1.22
MTHFD1-216ENST00000557539 COL26A1Q96A83 441 aa7.44□□□□□ -1.22
MTHFD1-216ENST00000557539 TSEN34Q9BSV6 310 aaKnown RBP7.44□□□□□ -1.22
MTHFD1-216ENST00000557539 ATAD2Q6PL18 1390 aa7.44□□□□□ -1.22
MTHFD1-216ENST00000557539 FAM13AO94988 1023 aa7.43□□□□□ -1.22
MTHFD1-216ENST00000557539 P4HBP07237 508 aaKnown RBP7.43□□□□□ -1.22
MTHFD1-216ENST00000557539 IGFBP4P22692 258 aa7.43□□□□□ -1.22
MTHFD1-216ENST00000557539 MEX3CQ5U5Q3 659 aaKnown RBP7.43□□□□□ -1.22
MTHFD1-216ENST00000557539 TMC7Q7Z402 723 aa7.43□□□□□ -1.22
MTHFD1-216ENST00000557539 CCDC125Q86Z20 511 aa7.43□□□□□ -1.22
MTHFD1-216ENST00000557539 SCG3Q8WXD2 468 aaKnown RBP7.43□□□□□ -1.22
MTHFD1-216ENST00000557539 ESF1Q9H501 851 aaKnown RBP7.43□□□□□ -1.22
MTHFD1-216ENST00000557539 STK17AQ9UEE5 414 aa7.43□□□□□ -1.22
MTHFD1-216ENST00000557539 CDV3Q9UKY7 258 aaKnown RBP7.43□□□□□ -1.22
MTHFD1-216ENST00000557539 FOXO3O43524 673 aa7.42□□□□□ -1.22
MTHFD1-216ENST00000557539 PPFIA3O75145 1194 aa7.42□□□□□ -1.22
MTHFD1-216ENST00000557539 UPP2O95045 317 aa7.42□□□□□ -1.22
MTHFD1-216ENST00000557539 HSP90B1P14625 803 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms