RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 RWDD1Q9H446 243 aaPredicted RBP18.21■□□□□ 0.51
ARHGEF40-208ENST00000557498 AFDNP55196 1824 aaKnown RBP18.21■□□□□ 0.51
ARHGEF40-208ENST00000557498 NEXNQ0ZGT2 675 aa18.2■□□□□ 0.5
ARHGEF40-208ENST00000557498 HDAC1Q13547 482 aaPredicted RBP18.2■□□□□ 0.5
ARHGEF40-208ENST00000557498 CCDC87Q9NVE4 849 aa18.2■□□□□ 0.5
ARHGEF40-208ENST00000557498 IL6STP40189 918 aaPredicted RBP18.19■□□□□ 0.5
ARHGEF40-208ENST00000557498 INTS5Q6P9B9 1019 aaKnown RBP18.19■□□□□ 0.5
ARHGEF40-208ENST00000557498 MYD88Q99836 296 aa18.19■□□□□ 0.5
ARHGEF40-208ENST00000557498 CRKLP46109 303 aaKnown RBP18.18■□□□□ 0.5
ARHGEF40-208ENST00000557498 KIF6Q6ZMV9 814 aa18.18■□□□□ 0.5
ARHGEF40-208ENST00000557498 LINC00116Q8NCU8 138 aa18.18■□□□□ 0.5
ARHGEF40-208ENST00000557498 USP44Q9H0E7 712 aa18.18■□□□□ 0.5
ARHGEF40-208ENST00000557498 ZNF330Q9Y3S2 320 aaPredicted RBP18.18■□□□□ 0.5
ARHGEF40-208ENST00000557498 MYH14Q7Z406 1995 aaKnown RBP18.18■□□□□ 0.5
ARHGEF40-208ENST00000557498 TAF1LQ8IZX4 1826 aa18.18■□□□□ 0.5
ARHGEF40-208ENST00000557498 GNAI2P04899 355 aa18.17■□□□□ 0.5
ARHGEF40-208ENST00000557498 IGKV5-2P06315 115 aa18.17■□□□□ 0.5
ARHGEF40-208ENST00000557498 UBTFL1P0CB47 393 aaPredicted RBP18.17■□□□□ 0.5
ARHGEF40-208ENST00000557498 CWF19L2Q2TBE0 894 aaKnown RBP18.17■□□□□ 0.5
ARHGEF40-208ENST00000557498 ZBTB3Q9H5J0 574 aa18.17■□□□□ 0.5
ARHGEF40-208ENST00000557498 CNTNAP4Q9C0A0 1308 aa18.17■□□□□ 0.5
ARHGEF40-208ENST00000557498 NEURL1BA8MQ27 555 aa18.16■□□□□ 0.5
ARHGEF40-208ENST00000557498 ANKRD44Q8N8A2 993 aa18.16■□□□□ 0.5
ARHGEF40-208ENST00000557498 CCNL1Q9UK58 526 aaPredicted RBP18.16■□□□□ 0.5
ARHGEF40-208ENST00000557498 MAP3K15Q6ZN16 1313 aa18.16■□□□□ 0.5
ARHGEF40-208ENST00000557498 ANKRD36CQ5JPF3 1778 aa18.15■□□□□ 0.5
ARHGEF40-208ENST00000557498 TRIM37O94972 964 aa18.15■□□□□ 0.5
ARHGEF40-208ENST00000557498 EIF5P55010 431 aaKnown RBP18.15■□□□□ 0.5
ARHGEF40-208ENST00000557498 CEP85Q6P2H3 762 aa18.15■□□□□ 0.5
ARHGEF40-208ENST00000557498 RPAP2Q8IXW5 612 aaPredicted RBP18.15■□□□□ 0.5
ARHGEF40-208ENST00000557498 GRM8O00222 908 aa18.14■□□□□ 0.49
ARHGEF40-208ENST00000557498 SIRT2Q8IXJ6 389 aa18.14■□□□□ 0.49
ARHGEF40-208ENST00000557498 PELP1Q8IZL8 1130 aaKnown RBP18.14■□□□□ 0.49
ARHGEF40-208ENST00000557498 LRRFIP2Q9Y608 721 aaKnown RBP18.14■□□□□ 0.49
ARHGEF40-208ENST00000557498 UTYO14607 1347 aa18.14■□□□□ 0.49
ARHGEF40-208ENST00000557498 C4BP0C0L5 1744 aa18.13■□□□□ 0.49
ARHGEF40-208ENST00000557498 TNS1Q9HBL0 1735 aaKnown RBP18.13■□□□□ 0.49
ARHGEF40-208ENST00000557498 BCORQ6W2J9 1755 aa18.13■□□□□ 0.49
ARHGEF40-208ENST00000557498 NBPF7P0C2Y1 421 aaPredicted RBP18.13■□□□□ 0.49
ARHGEF40-208ENST00000557498 KCNQ4P56696 695 aa18.13■□□□□ 0.49
ARHGEF40-208ENST00000557498 GCKRQ14397 625 aa18.13■□□□□ 0.49
ARHGEF40-208ENST00000557498 RC3H1Q5TC82 1133 aaKnown RBP18.13■□□□□ 0.49
ARHGEF40-208ENST00000557498 NPM2Q86SE8 214 aaKnown RBP18.13■□□□□ 0.49
ARHGEF40-208ENST00000557498 C9orf78Q9NZ63 289 aaPredicted RBP18.13■□□□□ 0.49
ARHGEF40-208ENST00000557498 DZIP3Q86Y13 1208 aaKnown RBP18.12■□□□□ 0.49
ARHGEF40-208ENST00000557498 HDAC5Q9UQL6 1122 aa18.12■□□□□ 0.49
ARHGEF40-208ENST00000557498 COL15A1P39059 1388 aa18.12■□□□□ 0.49
ARHGEF40-208ENST00000557498 NUP98P52948 1817 aa18.12■□□□□ 0.49
ARHGEF40-208ENST00000557498 ERVV-1B6SEH8 477 aa18.11■□□□□ 0.49
ARHGEF40-208ENST00000557498 ATP5J2-PTCD1G3V325 749 aa18.11■□□□□ 0.49
ARHGEF40-208ENST00000557498 TCIRG1Q13488 830 aa18.11■□□□□ 0.49
ARHGEF40-208ENST00000557498 GIGYF2Q6Y7W6 1299 aaKnown RBP18.11■□□□□ 0.49
ARHGEF40-208ENST00000557498 SMC5Q8IY18 1101 aa18.11■□□□□ 0.49
ARHGEF40-208ENST00000557498 ARXQ96QS3 562 aa18.11■□□□□ 0.49
ARHGEF40-208ENST00000557498 ISCA1Q9BUE6 129 aa18.11■□□□□ 0.49
ARHGEF40-208ENST00000557498 SCN7AQ01118 1682 aa18.1■□□□□ 0.49
ARHGEF40-208ENST00000557498 HSP90AB3PQ58FF7 597 aa18.1■□□□□ 0.49
ARHGEF40-208ENST00000557498 CWC25Q9NXE8 425 aaPredicted RBP18.1■□□□□ 0.49
ARHGEF40-208ENST00000557498 RGPD3A6NKT7 1758 aaPredicted RBP18.09■□□□□ 0.49
ARHGEF40-208ENST00000557498 RGPD4Q7Z3J3 1758 aa18.09■□□□□ 0.49
ARHGEF40-208ENST00000557498 A0A087WZG4 1122 aa18.09■□□□□ 0.49
ARHGEF40-208ENST00000557498 HMMRO75330 724 aa18.09■□□□□ 0.49
ARHGEF40-208ENST00000557498 ATP8B2P98198 1209 aa18.09■□□□□ 0.49
ARHGEF40-208ENST00000557498 HLFQ16534 295 aa18.09■□□□□ 0.49
ARHGEF40-208ENST00000557498 SLC27A3Q5K4L6 730 aa18.09■□□□□ 0.49
ARHGEF40-208ENST00000557498 CCDC191Q8NCU4 936 aa18.09■□□□□ 0.49
ARHGEF40-208ENST00000557498 GCC1Q96CN9 775 aa18.09■□□□□ 0.49
ARHGEF40-208ENST00000557498 TBC1D2BQ9UPU7 963 aa18.09■□□□□ 0.49
ARHGEF40-208ENST00000557498 RPS6KA4O75676 772 aa18.08■□□□□ 0.48
ARHGEF40-208ENST00000557498 TRIM28Q13263 835 aaKnown RBP18.08■□□□□ 0.48
ARHGEF40-208ENST00000557498 SUCLG2Q96I99 432 aa18.08■□□□□ 0.48
ARHGEF40-208ENST00000557498 CAMTA2O94983 1202 aa18.07■□□□□ 0.48
ARHGEF40-208ENST00000557498 LRRC4BQ9NT99 713 aa18.07■□□□□ 0.48
ARHGEF40-208ENST00000557498 GNPATO15228 680 aa18.06■□□□□ 0.48
ARHGEF40-208ENST00000557498 CASP7P55210 303 aa18.06■□□□□ 0.48
ARHGEF40-208ENST00000557498 DCTPP1Q9H773 170 aa18.06■□□□□ 0.48
ARHGEF40-208ENST00000557498 PDZRN3Q9UPQ7 1066 aa18.06■□□□□ 0.48
ARHGEF40-208ENST00000557498 C4AP0C0L4 1744 aa18.06■□□□□ 0.48
ARHGEF40-208ENST00000557498 PNMA6EA0A0J9YXQ4 647 aa18.05■□□□□ 0.48
ARHGEF40-208ENST00000557498 H7C1W4 665 aa18.05■□□□□ 0.48
ARHGEF40-208ENST00000557498 PLSCR1O15162 318 aa18.05■□□□□ 0.48
ARHGEF40-208ENST00000557498 MTX1Q13505 466 aa18.05■□□□□ 0.48
ARHGEF40-208ENST00000557498 UBE3BQ7Z3V4 1068 aa18.05■□□□□ 0.48
ARHGEF40-208ENST00000557498 KAZALD1Q96I82 304 aa18.05■□□□□ 0.48
ARHGEF40-208ENST00000557498 UBR3Q6ZT12 1888 aa18.05■□□□□ 0.48
ARHGEF40-208ENST00000557498 RGL2O15211 777 aa18.04■□□□□ 0.48
ARHGEF40-208ENST00000557498 APBA3O96018 575 aa18.04■□□□□ 0.48
ARHGEF40-208ENST00000557498 HMGB2P26583 209 aaKnown RBP18.04■□□□□ 0.48
ARHGEF40-208ENST00000557498 POLA2Q14181 598 aa18.04■□□□□ 0.48
ARHGEF40-208ENST00000557498 TXNRD1Q16881 649 aa18.04■□□□□ 0.48
ARHGEF40-208ENST00000557498 PPP1R42Q7Z4L9 355 aa18.04■□□□□ 0.48
ARHGEF40-208ENST00000557498 ILDR1Q86SU0 546 aaPredicted RBP18.04■□□□□ 0.48
ARHGEF40-208ENST00000557498 SKAP1Q86WV1 359 aa18.04■□□□□ 0.48
ARHGEF40-208ENST00000557498 SSH3Q8TE77 659 aa18.04■□□□□ 0.48
ARHGEF40-208ENST00000557498 AK7Q96M32 723 aa18.04■□□□□ 0.48
ARHGEF40-208ENST00000557498 RTCBQ9Y3I0 505 aaKnown RBP18.04■□□□□ 0.48
ARHGEF40-208ENST00000557498 GPTP24298 496 aa18.03■□□□□ 0.48
ARHGEF40-208ENST00000557498 NUCB1Q02818 461 aa18.03■□□□□ 0.48
ARHGEF40-208ENST00000557498 NLRP10Q86W26 655 aa18.03■□□□□ 0.48
ARHGEF40-208ENST00000557498 ZNF34Q8IZ26 560 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms