RNA–Protein interactions for RNA: ENST00000557403.5

RBM23-229, Transcript of RNA binding motif protein 23, human

TSL 3

Gene RBM23, Length 826 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-229	ENST00000557403	AFDN	P55196	1824 aa	Known RBP	12.09	□□□□□ -0.47
RBM23-229	ENST00000557403	PRAMEF22	A3QJZ6	481 aa		12.08	□□□□□ -0.48
RBM23-229	ENST00000557403	GRIN3B	O60391	1043 aa		12.08	□□□□□ -0.48
RBM23-229	ENST00000557403	A1BG	P04217	495 aa		12.08	□□□□□ -0.48
RBM23-229	ENST00000557403	DDR1	Q08345	913 aa		12.08	□□□□□ -0.48
RBM23-229	ENST00000557403	THUMPD2	Q9BTF0	503 aa	Known RBP	12.08	□□□□□ -0.48
RBM23-229	ENST00000557403	NARF	Q9UHQ1	456 aa		12.08	□□□□□ -0.48
RBM23-229	ENST00000557403	METRN	Q9UJH8	293 aa		12.08	□□□□□ -0.48
RBM23-229	ENST00000557403	BRCA1	P38398	1863 aa	Known RBP	12.07	□□□□□ -0.48
RBM23-229	ENST00000557403	EIF5	P55010	431 aa	Known RBP	12.07	□□□□□ -0.48
RBM23-229	ENST00000557403	WDR43	Q15061	677 aa	Known RBP eCLIP	12.07	□□□□□ -0.48
RBM23-229	ENST00000557403	TAF7	Q15545	349 aa	Predicted RBP	12.07	□□□□□ -0.48
RBM23-229	ENST00000557403	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.07	□□□□□ -0.48
RBM23-229	ENST00000557403	MIS18A	Q9NYP9	233 aa		12.07	□□□□□ -0.48
RBM23-229	ENST00000557403	PCDHB13	Q9Y5F0	798 aa		12.07	□□□□□ -0.48
RBM23-229	ENST00000557403	BCOR	Q6W2J9	1755 aa		12.07	□□□□□ -0.48
RBM23-229	ENST00000557403		A0A087WZG4	1122 aa		12.06	□□□□□ -0.48
RBM23-229	ENST00000557403	POLRMT	O00411	1230 aa	Known RBP	12.06	□□□□□ -0.48
RBM23-229	ENST00000557403	SNRPA1	P09661	255 aa	Known RBP	12.06	□□□□□ -0.48
RBM23-229	ENST00000557403	PIP4K2A	P48426	406 aa	Predicted RBP	12.06	□□□□□ -0.48
RBM23-229	ENST00000557403	DCAF8	Q5TAQ9	597 aa		12.06	□□□□□ -0.48
RBM23-229	ENST00000557403	NPM2	Q86SE8	214 aa	Known RBP	12.06	□□□□□ -0.48
RBM23-229	ENST00000557403	CCDC146	Q8IYE0	955 aa		12.06	□□□□□ -0.48
RBM23-229	ENST00000557403	BCL2L12	Q9HB09	334 aa		12.06	□□□□□ -0.48
RBM23-229	ENST00000557403	USP16	Q9Y5T5	823 aa		12.06	□□□□□ -0.48
RBM23-229	ENST00000557403	NRXN2	Q9P2S2	1712 aa		12.06	□□□□□ -0.48
RBM23-229	ENST00000557403		A0A0G2JLW4	131 aa		12.05	□□□□□ -0.48
RBM23-229	ENST00000557403	TM4SF1	P30408	202 aa		12.05	□□□□□ -0.48
RBM23-229	ENST00000557403	IL6ST	P40189	918 aa	Predicted RBP	12.05	□□□□□ -0.48
RBM23-229	ENST00000557403	RIPK4	P57078	832 aa		12.05	□□□□□ -0.48
RBM23-229	ENST00000557403	TGFB2	P61812	414 aa		12.05	□□□□□ -0.48
RBM23-229	ENST00000557403	NFIX	Q14938	502 aa		12.05	□□□□□ -0.48
RBM23-229	ENST00000557403	TBC1D2B	Q9UPU7	963 aa		12.05	□□□□□ -0.48
RBM23-229	ENST00000557403	DPEP1	P16444	411 aa		12.04	□□□□□ -0.48
RBM23-229	ENST00000557403	TMPO	P42166	694 aa	Known RBP	12.04	□□□□□ -0.48
RBM23-229	ENST00000557403	BICDL1	Q6ZP65	573 aa		12.04	□□□□□ -0.48
RBM23-229	ENST00000557403	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.04	□□□□□ -0.48
RBM23-229	ENST00000557403	PNISR	Q8TF01	805 aa	Known RBP	12.04	□□□□□ -0.48
RBM23-229	ENST00000557403	SLC39A7	Q92504	469 aa		12.04	□□□□□ -0.48
RBM23-229	ENST00000557403	RRP7A	Q9Y3A4	280 aa	Known RBP	12.04	□□□□□ -0.48
RBM23-229	ENST00000557403	NEUROD2	Q15784	382 aa		12.03	□□□□□ -0.48
RBM23-229	ENST00000557403	BCS1L	Q9Y276	419 aa		12.03	□□□□□ -0.48
RBM23-229	ENST00000557403	ARFGEF1	Q9Y6D6	1849 aa		12.02	□□□□□ -0.48
RBM23-229	ENST00000557403	SERPINB2	P05120	415 aa		12.02	□□□□□ -0.49
RBM23-229	ENST00000557403	LMOD3	Q0VAK6	560 aa		12.02	□□□□□ -0.49
RBM23-229	ENST00000557403	TBC1D9B	Q66K14	1250 aa		12.02	□□□□□ -0.49
RBM23-229	ENST00000557403	DZIP3	Q86Y13	1208 aa	Known RBP	12.02	□□□□□ -0.49
RBM23-229	ENST00000557403	IFNL1	Q8IU54	200 aa		12.02	□□□□□ -0.49
RBM23-229	ENST00000557403	RUNDC1	Q96C34	613 aa		12.02	□□□□□ -0.49
RBM23-229	ENST00000557403	TSPYL4	Q9UJ04	414 aa		12.02	□□□□□ -0.49
RBM23-229	ENST00000557403	ADAMTS8	Q9UP79	889 aa		12.02	□□□□□ -0.49
RBM23-229	ENST00000557403	DLEC1	Q9Y238	1755 aa		12.01	□□□□□ -0.49
RBM23-229	ENST00000557403	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.01	□□□□□ -0.49
RBM23-229	ENST00000557403	CAMTA2	O94983	1202 aa		12.01	□□□□□ -0.49
RBM23-229	ENST00000557403	C7	P10643	843 aa		12.01	□□□□□ -0.49
RBM23-229	ENST00000557403	PYGB	P11216	843 aa		12.01	□□□□□ -0.49
RBM23-229	ENST00000557403	CHRNA5	P30532	468 aa		12.01	□□□□□ -0.49
RBM23-229	ENST00000557403	TIE1	P35590	1138 aa		12.01	□□□□□ -0.49
RBM23-229	ENST00000557403	EIF4A1	P60842	406 aa	Known RBP	12.01	□□□□□ -0.49
RBM23-229	ENST00000557403	OTUD5	Q96G74	571 aa		12.01	□□□□□ -0.49
RBM23-229	ENST00000557403	ANKRD31	Q8N7Z5	1873 aa		12.01	□□□□□ -0.49
RBM23-229	ENST00000557403	CARMIL3	Q8ND23	1372 aa		12.01	□□□□□ -0.49
RBM23-229	ENST00000557403	TTLL13P	A6NNM8	815 aa		12	□□□□□ -0.49
RBM23-229	ENST00000557403	NBPF26	B4DH59	902 aa		12	□□□□□ -0.49
RBM23-229	ENST00000557403	GIGYF1	O75420	1035 aa	Predicted RBP	12	□□□□□ -0.49
RBM23-229	ENST00000557403	KCNA3	P22001	575 aa		12	□□□□□ -0.49
RBM23-229	ENST00000557403	NBPF10	Q6P3W6	841 aa	Known RBP	12	□□□□□ -0.49
RBM23-229	ENST00000557403	NBPF15	Q8N660	670 aa		12	□□□□□ -0.49
RBM23-229	ENST00000557403	PIM2	Q9P1W9	311 aa		11.99	□□□□□ -0.49
RBM23-229	ENST00000557403	COL11A2	P13942	1736 aa	Predicted RBP	11.99	□□□□□ -0.49
RBM23-229	ENST00000557403	ATP10D	Q9P241	1426 aa		11.98	□□□□□ -0.49
RBM23-229	ENST00000557403	NPHP1	O15259	732 aa		11.98	□□□□□ -0.49
RBM23-229	ENST00000557403	DALRD3	Q5D0E6	543 aa	Known RBP	11.98	□□□□□ -0.49
RBM23-229	ENST00000557403	CCDC24	Q8N4L8	307 aa		11.98	□□□□□ -0.49
RBM23-229	ENST00000557403	NGEF	Q8N5V2	710 aa		11.98	□□□□□ -0.49
RBM23-229	ENST00000557403	SETDB2	Q96T68	719 aa		11.98	□□□□□ -0.49
RBM23-229	ENST00000557403	ZNF652	Q9Y2D9	606 aa		11.98	□□□□□ -0.49
RBM23-229	ENST00000557403	LAS1L	Q9Y4W2	734 aa	Known RBP	11.98	□□□□□ -0.49
RBM23-229	ENST00000557403	CACNA1S	Q13698	1873 aa		11.97	□□□□□ -0.49
RBM23-229	ENST00000557403	MYL6B	P14649	208 aa		11.97	□□□□□ -0.49
RBM23-229	ENST00000557403	PRR5L	Q6MZQ0	368 aa		11.97	□□□□□ -0.49
RBM23-229	ENST00000557403	ARHGAP27	Q6ZUM4	889 aa		11.97	□□□□□ -0.49
RBM23-229	ENST00000557403	C2CD5	Q86YS7	1000 aa		11.97	□□□□□ -0.49
RBM23-229	ENST00000557403	TRIM35	Q9UPQ4	493 aa		11.97	□□□□□ -0.49
RBM23-229	ENST00000557403	NUP98	P52948	1817 aa		11.97	□□□□□ -0.49
RBM23-229	ENST00000557403	ADCY9	O60503	1353 aa		11.96	□□□□□ -0.49
RBM23-229	ENST00000557403	POTEJ	P0CG39	1038 aa		11.96	□□□□□ -0.49
RBM23-229	ENST00000557403	CCDC184	Q52MB2	194 aa		11.96	□□□□□ -0.49
RBM23-229	ENST00000557403	CNBD1	Q8NA66	436 aa		11.96	□□□□□ -0.49
RBM23-229	ENST00000557403	APAF1	O14727	1248 aa		11.95	□□□□□ -0.5
RBM23-229	ENST00000557403	EIF2S2	P20042	333 aa	Known RBP	11.95	□□□□□ -0.5
RBM23-229	ENST00000557403	ST5	P78524	1137 aa		11.95	□□□□□ -0.5
RBM23-229	ENST00000557403	HLF	Q16534	295 aa		11.95	□□□□□ -0.5
RBM23-229	ENST00000557403	CLEC4G	Q6UXB4	293 aa		11.95	□□□□□ -0.5
RBM23-229	ENST00000557403	ZNF526	Q8TF50	670 aa	Predicted RBP	11.95	□□□□□ -0.5
RBM23-229	ENST00000557403	BABAM1	Q9NWV8	329 aa		11.95	□□□□□ -0.5
RBM23-229	ENST00000557403	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
RBM23-229	ENST00000557403	ERBB4	Q15303	1308 aa		11.94	□□□□□ -0.5
RBM23-229	ENST00000557403	POTEF	A5A3E0	1075 aa		11.94	□□□□□ -0.5
RBM23-229	ENST00000557403	FAM177B	A6PVY3	158 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms