RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 CLASRPQ8N2M8 674 aaKnown RBP10.89□□□□□ -0.67
PPP4R3A-212ENST00000557382 RILPL2Q969X0 211 aa10.89□□□□□ -0.67
PPP4R3A-212ENST00000557382 FMNL2Q96PY5 1086 aa10.89□□□□□ -0.67
PPP4R3A-212ENST00000557382 STRCQ7RTU9 1775 aa10.89□□□□□ -0.67
PPP4R3A-212ENST00000557382 SOS2Q07890 1332 aaPredicted RBP10.88□□□□□ -0.67
PPP4R3A-212ENST00000557382 UBR2Q8IWV8 1755 aa10.88□□□□□ -0.67
PPP4R3A-212ENST00000557382 ANXA1P04083 346 aa10.88□□□□□ -0.67
PPP4R3A-212ENST00000557382 TTC5Q8N0Z6 440 aa10.88□□□□□ -0.67
PPP4R3A-212ENST00000557382 NFATC2IPQ8NCF5 419 aa10.88□□□□□ -0.67
PPP4R3A-212ENST00000557382 RUFY2Q8WXA3 655 aa10.88□□□□□ -0.67
PPP4R3A-212ENST00000557382 METTL22Q9BUU2 404 aaPredicted RBP10.88□□□□□ -0.67
PPP4R3A-212ENST00000557382 IL1RAPL2Q9NP60 686 aa10.88□□□□□ -0.67
PPP4R3A-212ENST00000557382 FOXD4L1Q9NU39 408 aa10.88□□□□□ -0.67
PPP4R3A-212ENST00000557382 AFDNP55196 1824 aaKnown RBP10.88□□□□□ -0.67
PPP4R3A-212ENST00000557382 WDR17Q8IZU2 1322 aa10.87□□□□□ -0.67
PPP4R3A-212ENST00000557382 ABCA3Q99758 1704 aa10.87□□□□□ -0.67
PPP4R3A-212ENST00000557382 FSD2A1L4K1 749 aa10.87□□□□□ -0.67
PPP4R3A-212ENST00000557382 ERVV-2B6SEH9 535 aa10.87□□□□□ -0.67
PPP4R3A-212ENST00000557382 CYP27B1O15528 508 aa10.87□□□□□ -0.67
PPP4R3A-212ENST00000557382 CYP2E1P05181 493 aaPredicted RBP10.87□□□□□ -0.67
PPP4R3A-212ENST00000557382 HSPA4P34932 840 aa10.87□□□□□ -0.67
PPP4R3A-212ENST00000557382 OS9Q13438 667 aaPredicted RBP10.87□□□□□ -0.67
PPP4R3A-212ENST00000557382 BRINP3Q76B58 766 aa10.87□□□□□ -0.67
PPP4R3A-212ENST00000557382 RIC3Q7Z5B4 369 aa10.87□□□□□ -0.67
PPP4R3A-212ENST00000557382 NUTM1Q86Y26 1132 aa10.87□□□□□ -0.67
PPP4R3A-212ENST00000557382 INTS4Q96HW7 963 aaKnown RBP10.87□□□□□ -0.67
PPP4R3A-212ENST00000557382 ARFGEF2Q9Y6D5 1785 aa10.87□□□□□ -0.67
PPP4R3A-212ENST00000557382 PAPPAQ13219 1627 aa10.87□□□□□ -0.67
PPP4R3A-212ENST00000557382 PCDH11XQ9BZA7 1347 aa10.86□□□□□ -0.67
PPP4R3A-212ENST00000557382 PCDH11YQ9BZA8 1340 aa10.86□□□□□ -0.67
PPP4R3A-212ENST00000557382 GLI3P10071 1580 aa10.86□□□□□ -0.67
PPP4R3A-212ENST00000557382 PRAMEF22A3QJZ6 481 aa10.86□□□□□ -0.67
PPP4R3A-212ENST00000557382 NEURL1BA8MQ27 555 aa10.86□□□□□ -0.67
PPP4R3A-212ENST00000557382 HIP1O00291 1037 aa10.86□□□□□ -0.67
PPP4R3A-212ENST00000557382 SGSM2O43147 1006 aa10.86□□□□□ -0.67
PPP4R3A-212ENST00000557382 CABP4P57796 275 aa10.86□□□□□ -0.67
PPP4R3A-212ENST00000557382 G3BP1Q13283 466 aaKnown RBP eCLIP10.86□□□□□ -0.67
PPP4R3A-212ENST00000557382 CUL4AQ13619 759 aa10.86□□□□□ -0.67
PPP4R3A-212ENST00000557382 NKX1-1Q15270 411 aaPredicted RBP10.86□□□□□ -0.67
PPP4R3A-212ENST00000557382 SAMD1Q6SPF0 538 aaPredicted RBP10.86□□□□□ -0.67
PPP4R3A-212ENST00000557382 LRP10Q7Z4F1 713 aa10.86□□□□□ -0.67
PPP4R3A-212ENST00000557382 SUCLG2Q96I99 432 aa10.86□□□□□ -0.67
PPP4R3A-212ENST00000557382 ZNF496Q96IT1 587 aaPredicted RBP10.86□□□□□ -0.67
PPP4R3A-212ENST00000557382 ANO2Q9NQ90 1003 aa10.86□□□□□ -0.67
PPP4R3A-212ENST00000557382 ECHDC1Q9NTX5 307 aa10.86□□□□□ -0.67
PPP4R3A-212ENST00000557382 RAD50Q92878 1312 aa10.85□□□□□ -0.67
PPP4R3A-212ENST00000557382 NHSL1Q5SYE7 1610 aa10.85□□□□□ -0.67
PPP4R3A-212ENST00000557382 IGKV5-2P06315 115 aa10.85□□□□□ -0.67
PPP4R3A-212ENST00000557382 IFIT2P09913 472 aaKnown RBP10.85□□□□□ -0.67
PPP4R3A-212ENST00000557382 NEK4P51957 841 aa10.85□□□□□ -0.67
PPP4R3A-212ENST00000557382 SLC39A6Q13433 755 aa10.85□□□□□ -0.67
PPP4R3A-212ENST00000557382 GCKRQ14397 625 aa10.85□□□□□ -0.67
PPP4R3A-212ENST00000557382 CWF19L2Q2TBE0 894 aaKnown RBP10.85□□□□□ -0.67
PPP4R3A-212ENST00000557382 TSHZ3Q63HK5 1081 aa10.85□□□□□ -0.67
PPP4R3A-212ENST00000557382 ANKRD13DQ6ZTN6 518 aa10.85□□□□□ -0.67
PPP4R3A-212ENST00000557382 UNC5CLQ8IV45 518 aa10.85□□□□□ -0.67
PPP4R3A-212ENST00000557382 XAGE3Q8WTP9 111 aa10.85□□□□□ -0.67
PPP4R3A-212ENST00000557382 DDX17Q92841 729 aaKnown RBP10.85□□□□□ -0.67
PPP4R3A-212ENST00000557382 EVI5LQ96CN4 794 aa10.85□□□□□ -0.67
PPP4R3A-212ENST00000557382 GOLGA6L3A6NEY3 463 aa10.84□□□□□ -0.67
PPP4R3A-212ENST00000557382 PLEKHG5O94827 1062 aa10.84□□□□□ -0.67
PPP4R3A-212ENST00000557382 SSFA2P28290 1259 aa10.84□□□□□ -0.67
PPP4R3A-212ENST00000557382 CHRNA2Q15822 529 aa10.84□□□□□ -0.67
PPP4R3A-212ENST00000557382 KIAA1211Q6ZU35 1233 aa10.84□□□□□ -0.67
PPP4R3A-212ENST00000557382 COPS6Q7L5N1 327 aa10.84□□□□□ -0.67
PPP4R3A-212ENST00000557382 PLBD2Q8NHP8 589 aa10.84□□□□□ -0.67
PPP4R3A-212ENST00000557382 ZCRB1Q8TBF4 217 aaKnown RBP10.84□□□□□ -0.67
PPP4R3A-212ENST00000557382 CABLES1Q8TDN4 633 aa10.84□□□□□ -0.67
PPP4R3A-212ENST00000557382 KAZALD1Q96I82 304 aa10.84□□□□□ -0.67
PPP4R3A-212ENST00000557382 CARD10Q9BWT7 1032 aa10.84□□□□□ -0.67
PPP4R3A-212ENST00000557382 BICC1Q9H694 974 aaKnown RBP10.84□□□□□ -0.67
PPP4R3A-212ENST00000557382 COL5A2P05997 1499 aaPredicted RBP10.84□□□□□ -0.67
PPP4R3A-212ENST00000557382 BAG4O95429 457 aaKnown RBP10.83□□□□□ -0.68
PPP4R3A-212ENST00000557382 AIMP1Q12904 312 aaKnown RBP10.83□□□□□ -0.68
PPP4R3A-212ENST00000557382 RABL6Q3YEC7 729 aaPredicted RBP10.83□□□□□ -0.68
PPP4R3A-212ENST00000557382 TICAM2Q86XR7 235 aa10.83□□□□□ -0.68
PPP4R3A-212ENST00000557382 KCNB2Q92953 911 aa10.83□□□□□ -0.68
PPP4R3A-212ENST00000557382 TMX3Q96JJ7 454 aa10.83□□□□□ -0.68
PPP4R3A-212ENST00000557382 LSG1Q9H089 658 aaKnown RBP10.83□□□□□ -0.68
PPP4R3A-212ENST00000557382 COPRSQ9NQ92 184 aa10.83□□□□□ -0.68
PPP4R3A-212ENST00000557382 PRDM11Q9NQV5 511 aa10.83□□□□□ -0.68
PPP4R3A-212ENST00000557382 SNRKQ9NRH2 765 aa10.83□□□□□ -0.68
PPP4R3A-212ENST00000557382 SLAIN2Q9P270 581 aa10.83□□□□□ -0.68
PPP4R3A-212ENST00000557382 USP16Q9Y5T5 823 aa10.83□□□□□ -0.68
PPP4R3A-212ENST00000557382 NUP188Q5SRE5 1749 aa10.83□□□□□ -0.68
PPP4R3A-212ENST00000557382 SHANK3Q9BYB0 1731 aa10.83□□□□□ -0.68
PPP4R3A-212ENST00000557382 RFX7Q2KHR2 1363 aa10.82□□□□□ -0.68
PPP4R3A-212ENST00000557382 MRE11P49959 708 aa10.82□□□□□ -0.68
PPP4R3A-212ENST00000557382 KLHL40Q2TBA0 621 aa10.82□□□□□ -0.68
PPP4R3A-212ENST00000557382 AACSQ86V21 672 aa10.82□□□□□ -0.68
PPP4R3A-212ENST00000557382 MYD88Q99836 296 aa10.82□□□□□ -0.68
PPP4R3A-212ENST00000557382 DIAPH3Q9NSV4 1193 aa10.82□□□□□ -0.68
PPP4R3A-212ENST00000557382 KCPQ6ZWJ8 1503 aa10.81□□□□□ -0.68
PPP4R3A-212ENST00000557382 SASH1O94885 1247 aa10.81□□□□□ -0.68
PPP4R3A-212ENST00000557382 MYL6BP14649 208 aa10.81□□□□□ -0.68
PPP4R3A-212ENST00000557382 IL2RBP14784 551 aa10.81□□□□□ -0.68
PPP4R3A-212ENST00000557382 HSPA2P54652 639 aa10.81□□□□□ -0.68
PPP4R3A-212ENST00000557382 TOM1L2Q6ZVM7 507 aa10.81□□□□□ -0.68
PPP4R3A-212ENST00000557382 TM6SF1Q9BZW5 370 aa10.81□□□□□ -0.68
PPP4R3A-212ENST00000557382 PALD1Q9ULE6 856 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms