RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 TEX13AQ9BXU3 409 aaPredicted RBP17.08■□□□□ 0.32
PSEN1-221ENST00000557293 SCN4AP35499 1836 aa17.07■□□□□ 0.32
PSEN1-221ENST00000557293 SCN7AQ01118 1682 aa17.07■□□□□ 0.32
PSEN1-221ENST00000557293 KLRG2A4D1S0 409 aaPredicted RBP17.07■□□□□ 0.32
PSEN1-221ENST00000557293 RASSF10A6NK89 507 aa17.07■□□□□ 0.32
PSEN1-221ENST00000557293 OLFM4Q6UX06 510 aa17.07■□□□□ 0.32
PSEN1-221ENST00000557293 TTC5Q8N0Z6 440 aa17.07■□□□□ 0.32
PSEN1-221ENST00000557293 ABHD8Q96I13 439 aa17.07■□□□□ 0.32
PSEN1-221ENST00000557293 KNSTRNQ9Y448 316 aa17.07■□□□□ 0.32
PSEN1-221ENST00000557293 KCNQ3O43525 872 aa17.06■□□□□ 0.32
PSEN1-221ENST00000557293 EIF4G2P78344 907 aaKnown RBP eCLIP17.06■□□□□ 0.32
PSEN1-221ENST00000557293 SOGA3Q5TF21 947 aa17.06■□□□□ 0.32
PSEN1-221ENST00000557293 AIDAQ96BJ3 306 aa17.06■□□□□ 0.32
PSEN1-221ENST00000557293 ZNF330Q9Y3S2 320 aaPredicted RBP17.06■□□□□ 0.32
PSEN1-221ENST00000557293 ADAMTSL1Q8N6G6 1762 aa17.06■□□□□ 0.32
PSEN1-221ENST00000557293 DEFB115Q30KQ5 88 aa17.05■□□□□ 0.32
PSEN1-221ENST00000557293 EAPPQ56P03 285 aaPredicted RBP17.05■□□□□ 0.32
PSEN1-221ENST00000557293 ZNF277Q9NRM2 450 aaPredicted RBP17.05■□□□□ 0.32
PSEN1-221ENST00000557293 HACL1Q9UJ83 578 aa17.05■□□□□ 0.32
PSEN1-221ENST00000557293 EPHX2P34913 555 aa17.04■□□□□ 0.32
PSEN1-221ENST00000557293 FKBP4Q02790 459 aaKnown RBP eCLIP17.04■□□□□ 0.32
PSEN1-221ENST00000557293 CCDC93Q567U6 631 aa17.04■□□□□ 0.32
PSEN1-221ENST00000557293 MAP1SQ66K74 1059 aaPredicted RBP17.04■□□□□ 0.32
PSEN1-221ENST00000557293 CNTROBQ8N137 903 aa17.04■□□□□ 0.32
PSEN1-221ENST00000557293 USP16Q9Y5T5 823 aa17.04■□□□□ 0.32
PSEN1-221ENST00000557293 ARFGEF2Q9Y6D5 1785 aa17.04■□□□□ 0.32
PSEN1-221ENST00000557293 CACNA1SQ13698 1873 aa17.03■□□□□ 0.32
PSEN1-221ENST00000557293 FZD9O00144 591 aa17.03■□□□□ 0.32
PSEN1-221ENST00000557293 DIAPH1O60610 1272 aaKnown RBP17.03■□□□□ 0.32
PSEN1-221ENST00000557293 ST5P78524 1137 aa17.03■□□□□ 0.32
PSEN1-221ENST00000557293 DZIP3Q86Y13 1208 aaKnown RBP17.03■□□□□ 0.32
PSEN1-221ENST00000557293 CLEC11AQ9Y240 323 aa17.03■□□□□ 0.32
PSEN1-221ENST00000557293 WDR33Q9C0J8 1336 aaKnown RBP17.02■□□□□ 0.32
PSEN1-221ENST00000557293 NPR1P16066 1061 aa17.02■□□□□ 0.32
PSEN1-221ENST00000557293 PIP4K2AP48426 406 aaPredicted RBP17.02■□□□□ 0.32
PSEN1-221ENST00000557293 FMR1Q06787 632 aaKnown RBP eCLIP17.02■□□□□ 0.32
PSEN1-221ENST00000557293 TEFQ10587 303 aa17.02■□□□□ 0.32
PSEN1-221ENST00000557293 FAM161AQ3B820 660 aa17.02■□□□□ 0.32
PSEN1-221ENST00000557293 PRAMEF22A3QJZ6 481 aa17.01■□□□□ 0.31
PSEN1-221ENST00000557293 GNAT3A8MTJ3 354 aa17.01■□□□□ 0.31
PSEN1-221ENST00000557293 PER1O15534 1290 aaPredicted RBP17.01■□□□□ 0.31
PSEN1-221ENST00000557293 RGS19P49795 217 aa17.01■□□□□ 0.31
PSEN1-221ENST00000557293 CLEC4GQ6UXB4 293 aa17.01■□□□□ 0.31
PSEN1-221ENST00000557293 FMNL2Q96PY5 1086 aa17.01■□□□□ 0.31
PSEN1-221ENST00000557293 SIPA1L3O60292 1781 aaPredicted RBP17.01■□□□□ 0.31
PSEN1-221ENST00000557293 RNF123Q5XPI4 1314 aa17■□□□□ 0.31
PSEN1-221ENST00000557293 PNMA8AQ86V59 439 aaPredicted RBP17■□□□□ 0.31
PSEN1-221ENST00000557293 SYNE4Q8N205 404 aa17■□□□□ 0.31
PSEN1-221ENST00000557293 CEMIPQ8WUJ3 1361 aa17■□□□□ 0.31
PSEN1-221ENST00000557293 SNED1Q8TER0 1413 aa16.99■□□□□ 0.31
PSEN1-221ENST00000557293 NPHP1O15259 732 aa16.99■□□□□ 0.31
PSEN1-221ENST00000557293 MAP2K1Q02750 393 aaPredicted RBP16.99■□□□□ 0.31
PSEN1-221ENST00000557293 NBPF5PQ86XG9 351 aaPredicted RBP16.99■□□□□ 0.31
PSEN1-221ENST00000557293 BCORQ6W2J9 1755 aa16.98■□□□□ 0.31
PSEN1-221ENST00000557293 IARSP41252 1262 aaKnown RBP16.98■□□□□ 0.31
PSEN1-221ENST00000557293 RTKN2Q8IZC4 609 aa16.98■□□□□ 0.31
PSEN1-221ENST00000557293 DDX21Q9NR30 783 aaKnown RBP eCLIP16.98■□□□□ 0.31
PSEN1-221ENST00000557293 NBPF26B4DH59 902 aa16.97■□□□□ 0.31
PSEN1-221ENST00000557293 NBPF10Q6P3W6 841 aaKnown RBP16.97■□□□□ 0.31
PSEN1-221ENST00000557293 GPC2Q8N158 579 aa16.97■□□□□ 0.31
PSEN1-221ENST00000557293 NBPF15Q8N660 670 aa16.97■□□□□ 0.31
PSEN1-221ENST00000557293 PHACTR3Q96KR7 559 aa16.97■□□□□ 0.31
PSEN1-221ENST00000557293 CST9Q5W186 159 aa16.96■□□□□ 0.31
PSEN1-221ENST00000557293 TPTE2Q6XPS3 522 aa16.96■□□□□ 0.31
PSEN1-221ENST00000557293 GAS2L2Q8NHY3 880 aa16.96■□□□□ 0.31
PSEN1-221ENST00000557293 COL3A1P02461 1466 aaPredicted RBP16.96■□□□□ 0.31
PSEN1-221ENST00000557293 COL4A5P29400 1685 aa16.96■□□□□ 0.31
PSEN1-221ENST00000557293 BTBD11A6QL63 1104 aa16.95■□□□□ 0.3
PSEN1-221ENST00000557293 HLFQ16534 295 aa16.95■□□□□ 0.3
PSEN1-221ENST00000557293 NPM2Q86SE8 214 aaKnown RBP16.95■□□□□ 0.3
PSEN1-221ENST00000557293 ABT1Q9ULW3 272 aaKnown RBP16.95■□□□□ 0.3
PSEN1-221ENST00000557293 LTBP1Q14766 1721 aa16.95■□□□□ 0.3
PSEN1-221ENST00000557293 ALDH1B1P30837 517 aa16.94■□□□□ 0.3
PSEN1-221ENST00000557293 EPS15P42566 896 aa16.94■□□□□ 0.3
PSEN1-221ENST00000557293 CAPNS2Q96L46 248 aa16.94■□□□□ 0.3
PSEN1-221ENST00000557293 PSMD1Q99460 953 aa16.94■□□□□ 0.3
PSEN1-221ENST00000557293 NIP7Q9Y221 180 aaKnown RBP eCLIP16.94■□□□□ 0.3
PSEN1-221ENST00000557293 FAM177BA6PVY3 158 aa16.93■□□□□ 0.3
PSEN1-221ENST00000557293 RGL2O15211 777 aa16.93■□□□□ 0.3
PSEN1-221ENST00000557293 SCNN1DP51172 638 aa16.93■□□□□ 0.3
PSEN1-221ENST00000557293 MLLT1Q03111 559 aaPredicted RBP16.93■□□□□ 0.3
PSEN1-221ENST00000557293 TRIM26Q12899 539 aaPredicted RBP16.93■□□□□ 0.3
PSEN1-221ENST00000557293 CC2D1BQ5T0F9 858 aaKnown RBP16.93■□□□□ 0.3
PSEN1-221ENST00000557293 CYP4F22Q6NT55 531 aa16.93■□□□□ 0.3
PSEN1-221ENST00000557293 SLC51AQ86UW1 340 aa16.93■□□□□ 0.3
PSEN1-221ENST00000557293 GPR101Q96P66 508 aaPredicted RBP16.93■□□□□ 0.3
PSEN1-221ENST00000557293 CCDC85CA6NKD9 419 aa16.92■□□□□ 0.3
PSEN1-221ENST00000557293 TRAF5O00463 557 aa16.92■□□□□ 0.3
PSEN1-221ENST00000557293 U2SURPO15042 1029 aaKnown RBP16.92■□□□□ 0.3
PSEN1-221ENST00000557293 SNRPA1P09661 255 aaKnown RBP16.92■□□□□ 0.3
PSEN1-221ENST00000557293 CRY2Q49AN0 593 aa16.92■□□□□ 0.3
PSEN1-221ENST00000557293 CLSPNQ9HAW4 1339 aa16.92■□□□□ 0.3
PSEN1-221ENST00000557293 THSD7BQ9C0I4 1608 aa16.92■□□□□ 0.3
PSEN1-221ENST00000557293 ZNF652Q9Y2D9 606 aa16.91■□□□□ 0.3
PSEN1-221ENST00000557293 GJA3Q9Y6H8 435 aa16.91■□□□□ 0.3
PSEN1-221ENST00000557293 KIF7Q2M1P5 1343 aa16.91■□□□□ 0.3
PSEN1-221ENST00000557293 JDP2Q8WYK2 163 aa16.9■□□□□ 0.3
PSEN1-221ENST00000557293 TSKSQ9UJT2 592 aa16.9■□□□□ 0.3
PSEN1-221ENST00000557293 TLL2Q9Y6L7 1015 aa16.9■□□□□ 0.3
PSEN1-221ENST00000557293 AOC2O75106 756 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms