RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 NBPF5PQ86XG9 351 aaPredicted RBP21.03■□□□□ 0.96
TUBB3-213ENST00000557262 CNKSR1Q969H4 720 aa21.03■□□□□ 0.96
TUBB3-213ENST00000557262 GLTPD2A6NH11 291 aa21.02■□□□□ 0.96
TUBB3-213ENST00000557262 SRGNP10124 158 aa21.02■□□□□ 0.96
TUBB3-213ENST00000557262 STYK1Q6J9G0 422 aa21.02■□□□□ 0.96
TUBB3-213ENST00000557262 ZNF219Q9P2Y4 722 aaPredicted RBP21.02■□□□□ 0.96
TUBB3-213ENST00000557262 ANKRD31Q8N7Z5 1873 aa21.01■□□□□ 0.95
TUBB3-213ENST00000557262 FSTL1Q12841 308 aa21.01■□□□□ 0.95
TUBB3-213ENST00000557262 TPTE2Q6XPS3 522 aa21.01■□□□□ 0.95
TUBB3-213ENST00000557262 MASTLQ96GX5 879 aa21.01■□□□□ 0.95
TUBB3-213ENST00000557262 EIF4A1P60842 406 aaKnown RBP21■□□□□ 0.95
TUBB3-213ENST00000557262 RALBP1Q15311 655 aa21■□□□□ 0.95
TUBB3-213ENST00000557262 NIP7Q9Y221 180 aaKnown RBP eCLIP21■□□□□ 0.95
TUBB3-213ENST00000557262 MAPK8IP3Q9UPT6 1336 aa21■□□□□ 0.95
TUBB3-213ENST00000557262 VEGFAP15692 232 aaPredicted RBP20.98■□□□□ 0.95
TUBB3-213ENST00000557262 HLFQ16534 295 aa20.98■□□□□ 0.95
TUBB3-213ENST00000557262 DPY19L2Q6NUT2 758 aa20.98■□□□□ 0.95
TUBB3-213ENST00000557262 THUMPD2Q9BTF0 503 aaKnown RBP20.98■□□□□ 0.95
TUBB3-213ENST00000557262 BCORQ6W2J9 1755 aa20.97■□□□□ 0.95
TUBB3-213ENST00000557262 KLRG2A4D1S0 409 aaPredicted RBP20.97■□□□□ 0.95
TUBB3-213ENST00000557262 SOGA3Q5TF21 947 aa20.97■□□□□ 0.95
TUBB3-213ENST00000557262 PRPF40BQ6NWY9 871 aaKnown RBP20.97■□□□□ 0.95
TUBB3-213ENST00000557262 DNAJC5GQ8N7S2 189 aa20.97■□□□□ 0.95
TUBB3-213ENST00000557262 ERFEQ4G0M1 354 aa20.96■□□□□ 0.95
TUBB3-213ENST00000557262 NGEFQ8N5V2 710 aa20.96■□□□□ 0.95
TUBB3-213ENST00000557262 RRP7AQ9Y3A4 280 aaKnown RBP20.96■□□□□ 0.95
TUBB3-213ENST00000557262 LTBP3Q9NS15 1303 aa20.96■□□□□ 0.95
TUBB3-213ENST00000557262 DLG5Q8TDM6 1919 aa20.96■□□□□ 0.95
TUBB3-213ENST00000557262 TNRC6CQ9HCJ0 1690 aaKnown RBP20.96■□□□□ 0.95
TUBB3-213ENST00000557262 COL11A2P13942 1736 aaPredicted RBP20.95■□□□□ 0.94
TUBB3-213ENST00000557262 FAM177BA6PVY3 158 aa20.95■□□□□ 0.94
TUBB3-213ENST00000557262 ERVV-1B6SEH8 477 aa20.95■□□□□ 0.94
TUBB3-213ENST00000557262 NPR1P16066 1061 aa20.95■□□□□ 0.94
TUBB3-213ENST00000557262 SMC1BQ8NDV3 1235 aa20.95■□□□□ 0.94
TUBB3-213ENST00000557262 TAOK3Q9H2K8 898 aa20.95■□□□□ 0.94
TUBB3-213ENST00000557262 GTF2E1P29083 439 aaPredicted RBP20.94■□□□□ 0.94
TUBB3-213ENST00000557262 RIPK4P57078 832 aa20.94■□□□□ 0.94
TUBB3-213ENST00000557262 CCDC88AQ3V6T2 1871 aa20.94■□□□□ 0.94
TUBB3-213ENST00000557262 DDX10Q13206 875 aaKnown RBP20.93■□□□□ 0.94
TUBB3-213ENST00000557262 C7orf43Q8WVR3 580 aa20.93■□□□□ 0.94
TUBB3-213ENST00000557262 SLX4Q8IY92 1834 aa20.92■□□□□ 0.94
TUBB3-213ENST00000557262 MYL6BP14649 208 aa20.92■□□□□ 0.94
TUBB3-213ENST00000557262 MAP3K15Q6ZN16 1313 aa20.92■□□□□ 0.94
TUBB3-213ENST00000557262 POTECB2RU33 542 aa20.91■□□□□ 0.94
TUBB3-213ENST00000557262 ALDH1B1P30837 517 aa20.91■□□□□ 0.94
TUBB3-213ENST00000557262 FER1L6Q2WGJ9 1857 aa20.91■□□□□ 0.94
TUBB3-213ENST00000557262 KIF6Q6ZMV9 814 aa20.91■□□□□ 0.94
TUBB3-213ENST00000557262 TTLL7Q6ZT98 887 aa20.91■□□□□ 0.94
TUBB3-213ENST00000557262 KDM3BQ7LBC6 1761 aa20.91■□□□□ 0.94
TUBB3-213ENST00000557262 TIAM2Q8IVF5 1701 aa20.91■□□□□ 0.94
TUBB3-213ENST00000557262 NYXQ9GZU5 481 aa20.91■□□□□ 0.94
TUBB3-213ENST00000557262 TSPYL4Q9UJ04 414 aa20.91■□□□□ 0.94
TUBB3-213ENST00000557262 TMPOP42166 694 aaKnown RBP20.9■□□□□ 0.94
TUBB3-213ENST00000557262 CCDC93Q567U6 631 aa20.9■□□□□ 0.94
TUBB3-213ENST00000557262 BABAM1Q9NWV8 329 aa20.9■□□□□ 0.94
TUBB3-213ENST00000557262 ERBB4Q15303 1308 aa20.89■□□□□ 0.93
TUBB3-213ENST00000557262 LAMB4A4D0S4 1761 aa20.88■□□□□ 0.93
TUBB3-213ENST00000557262 MYBBP1AQ9BQG0 1328 aaKnown RBP20.88■□□□□ 0.93
TUBB3-213ENST00000557262 WDR90Q96KV7 1748 aa20.88■□□□□ 0.93
TUBB3-213ENST00000557262 HTRA3P83110 453 aa20.88■□□□□ 0.93
TUBB3-213ENST00000557262 LMOD3Q0VAK6 560 aa20.88■□□□□ 0.93
TUBB3-213ENST00000557262 NUTM1Q86Y26 1132 aa20.87■□□□□ 0.93
TUBB3-213ENST00000557262 RTKN2Q8IZC4 609 aa20.87■□□□□ 0.93
TUBB3-213ENST00000557262 ZBTB3Q9H5J0 574 aa20.87■□□□□ 0.93
TUBB3-213ENST00000557262 DICER1Q9UPY3 1922 aaKnown RBP20.86■□□□□ 0.93
TUBB3-213ENST00000557262 CACNA1SQ13698 1873 aa20.86■□□□□ 0.93
TUBB3-213ENST00000557262 DDNO94850 711 aaPredicted RBP20.86■□□□□ 0.93
TUBB3-213ENST00000557262 EIF2S2P20042 333 aaKnown RBP20.86■□□□□ 0.93
TUBB3-213ENST00000557262 FKBP4Q02790 459 aaKnown RBP eCLIP20.86■□□□□ 0.932e-6■■■■□ 22.8
TUBB3-213ENST00000557262 IFFO2Q5TF58 517 aa20.86■□□□□ 0.93
TUBB3-213ENST00000557262 GIGYF2Q6Y7W6 1299 aaKnown RBP20.86■□□□□ 0.93
TUBB3-213ENST00000557262 ZNF34Q8IZ26 560 aa20.86■□□□□ 0.93
TUBB3-213ENST00000557262 KLRG1Q96E93 195 aa20.86■□□□□ 0.93
TUBB3-213ENST00000557262 ARFGEF2Q9Y6D5 1785 aa20.85■□□□□ 0.93
TUBB3-213ENST00000557262 GPTP24298 496 aa20.85■□□□□ 0.93
TUBB3-213ENST00000557262 CRY2Q49AN0 593 aa20.85■□□□□ 0.93
TUBB3-213ENST00000557262 SUSD4Q5VX71 490 aa20.85■□□□□ 0.93
TUBB3-213ENST00000557262 PDIA6Q15084 440 aa20.84■□□□□ 0.93
TUBB3-213ENST00000557262 OLFM4Q6UX06 510 aa20.84■□□□□ 0.93
TUBB3-213ENST00000557262 NUP98P52948 1817 aa20.83■□□□□ 0.93
TUBB3-213ENST00000557262 UBN2Q6ZU65 1347 aa20.83■□□□□ 0.93
TUBB3-213ENST00000557262 NEUROD2Q15784 382 aa20.83■□□□□ 0.93
TUBB3-213ENST00000557262 CCDC146Q8IYE0 955 aa20.83■□□□□ 0.93
TUBB3-213ENST00000557262 LRP10Q7Z4F1 713 aa20.82■□□□□ 0.92
TUBB3-213ENST00000557262 PPP1R42Q7Z4L9 355 aa20.82■□□□□ 0.92
TUBB3-213ENST00000557262 RUNDC1Q96C34 613 aa20.82■□□□□ 0.92
TUBB3-213ENST00000557262 ZNF277Q9NRM2 450 aaPredicted RBP20.82■□□□□ 0.92
TUBB3-213ENST00000557262 IBTKQ9P2D0 1353 aaPredicted RBP20.82■□□□□ 0.92
TUBB3-213ENST00000557262 HOXA10P31260 410 aaPredicted RBP20.81■□□□□ 0.92
TUBB3-213ENST00000557262 WDR43Q15061 677 aaKnown RBP eCLIP20.81■□□□□ 0.92
TUBB3-213ENST00000557262 PARP10Q53GL7 1025 aa20.81■□□□□ 0.92
TUBB3-213ENST00000557262 CC2D2BQ6DHV5 1058 aa20.81■□□□□ 0.92
TUBB3-213ENST00000557262 SYNE4Q8N205 404 aa20.81■□□□□ 0.92
TUBB3-213ENST00000557262 JMYQ8N9B5 988 aa20.81■□□□□ 0.92
TUBB3-213ENST00000557262 RPGRQ92834 1020 aaKnown RBP20.81■□□□□ 0.92
TUBB3-213ENST00000557262 ABCC12Q96J65 1359 aa20.81■□□□□ 0.92
TUBB3-213ENST00000557262 CHL1O00533 1208 aa20.8■□□□□ 0.92
TUBB3-213ENST00000557262 NTSR2O95665 410 aa20.8■□□□□ 0.92
TUBB3-213ENST00000557262 IQCA1LA6NCM1 817 aa20.79■□□□□ 0.92
TUBB3-213ENST00000557262 ANXA1P04083 346 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 521.4 ms