RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 SRGNP10124 158 aa14.34□□□□□ -0.11
HNRNPC-230ENST00000557201 PPP2R1AP30153 589 aa14.34□□□□□ -0.11
HNRNPC-230ENST00000557201 ZNF622Q969S3 477 aaKnown RBP eCLIP14.34□□□□□ -0.111e-21■□□□□ 9
HNRNPC-230ENST00000557201 CFAP53Q96M91 514 aa14.34□□□□□ -0.11
HNRNPC-230ENST00000557201 STYK1Q6J9G0 422 aa14.33□□□□□ -0.12
HNRNPC-230ENST00000557201 CLEC4GQ6UXB4 293 aa14.33□□□□□ -0.12
HNRNPC-230ENST00000557201 DZIP3Q86Y13 1208 aaKnown RBP14.33□□□□□ -0.12
HNRNPC-230ENST00000557201 CNBD1Q8NA66 436 aa14.33□□□□□ -0.12
HNRNPC-230ENST00000557201 NBPF26B4DH59 902 aa14.32□□□□□ -0.12
HNRNPC-230ENST00000557201 SNRPA1P09661 255 aaKnown RBP14.32□□□□□ -0.12
HNRNPC-230ENST00000557201 PIP4K2AP48426 406 aaPredicted RBP14.32□□□□□ -0.12
HNRNPC-230ENST00000557201 NBPF10Q6P3W6 841 aaKnown RBP14.32□□□□□ -0.12
HNRNPC-230ENST00000557201 MCM10Q7L590 875 aa14.32□□□□□ -0.12
HNRNPC-230ENST00000557201 NBPF15Q8N660 670 aa14.32□□□□□ -0.12
HNRNPC-230ENST00000557201 NUDCQ9Y266 331 aa14.32□□□□□ -0.12
HNRNPC-230ENST00000557201 DICER1Q9UPY3 1922 aaKnown RBP14.32□□□□□ -0.12
HNRNPC-230ENST00000557201 SLX4Q8IY92 1834 aa14.31□□□□□ -0.12
HNRNPC-230ENST00000557201 KLRG2A4D1S0 409 aaPredicted RBP14.31□□□□□ -0.12
HNRNPC-230ENST00000557201 RGL2O15211 777 aa14.31□□□□□ -0.12
HNRNPC-230ENST00000557201 HTATSF1O43719 755 aaKnown RBP14.31□□□□□ -0.12
HNRNPC-230ENST00000557201 U2AF1L5P0DN76 240 aaPredicted RBP14.31□□□□□ -0.12
HNRNPC-230ENST00000557201 U2AF1Q01081 240 aaKnown RBP eCLIP14.31□□□□□ -0.126e-11■■□□□ 14.2
HNRNPC-230ENST00000557201 DCTN1Q14203 1278 aa14.31□□□□□ -0.12
HNRNPC-230ENST00000557201 C7orf43Q8WVR3 580 aa14.31□□□□□ -0.12
HNRNPC-230ENST00000557201 CNKSR1Q969H4 720 aa14.31□□□□□ -0.12
HNRNPC-230ENST00000557201 FOXD4L1Q9NU39 408 aa14.31□□□□□ -0.12
HNRNPC-230ENST00000557201 PCNTO95613 3336 aa14.3□□□□□ -0.12
HNRNPC-230ENST00000557201 ARFGEF2Q9Y6D5 1785 aa14.3□□□□□ -0.12
HNRNPC-230ENST00000557201 ZBTB22O15209 634 aa14.3□□□□□ -0.12
HNRNPC-230ENST00000557201 ST5P78524 1137 aa14.3□□□□□ -0.12
HNRNPC-230ENST00000557201 ERFEQ4G0M1 354 aa14.3□□□□□ -0.12
HNRNPC-230ENST00000557201 PRPF40BQ6NWY9 871 aaKnown RBP14.3□□□□□ -0.12
HNRNPC-230ENST00000557201 MASTLQ96GX5 879 aa14.3□□□□□ -0.12
HNRNPC-230ENST00000557201 ZNF219Q9P2Y4 722 aaPredicted RBP14.3□□□□□ -0.12
HNRNPC-230ENST00000557201 DPY19L2Q6NUT2 758 aa14.29□□□□□ -0.12
HNRNPC-230ENST00000557201 NPM2Q86SE8 214 aaKnown RBP14.29□□□□□ -0.12
HNRNPC-230ENST00000557201 RTF1Q92541 710 aaKnown RBP14.29□□□□□ -0.12
HNRNPC-230ENST00000557201 TAOK3Q9H2K8 898 aa14.29□□□□□ -0.12
HNRNPC-230ENST00000557201 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
HNRNPC-230ENST00000557201 SLC4A2P04920 1241 aa14.28□□□□□ -0.12
HNRNPC-230ENST00000557201 TAF7Q15545 349 aaPredicted RBP14.27□□□□□ -0.12
HNRNPC-230ENST00000557201 SOGA3Q5TF21 947 aa14.27□□□□□ -0.12
HNRNPC-230ENST00000557201 NBPF5PQ86XG9 351 aaPredicted RBP14.27□□□□□ -0.12
HNRNPC-230ENST00000557201 HLFQ16534 295 aa14.26□□□□□ -0.13
HNRNPC-230ENST00000557201 COL13A1Q5TAT6 717 aaPredicted RBP14.26□□□□□ -0.13
HNRNPC-230ENST00000557201 ZNF652Q9Y2D9 606 aa14.26□□□□□ -0.13
HNRNPC-230ENST00000557201 DDNO94850 711 aaPredicted RBP14.25□□□□□ -0.13
HNRNPC-230ENST00000557201 NPR1P16066 1061 aa14.25□□□□□ -0.13
HNRNPC-230ENST00000557201 PLEKHF1Q96S99 279 aa14.25□□□□□ -0.13
HNRNPC-230ENST00000557201 MIS18AQ9NYP9 233 aa14.25□□□□□ -0.13
HNRNPC-230ENST00000557201 NIP7Q9Y221 180 aaKnown RBP eCLIP14.25□□□□□ -0.13
HNRNPC-230ENST00000557201 CACNA1SQ13698 1873 aa14.25□□□□□ -0.13
HNRNPC-230ENST00000557201 NPHP1O15259 732 aa14.24□□□□□ -0.13
HNRNPC-230ENST00000557201 POTEIP0CG38 1075 aa14.24□□□□□ -0.13
HNRNPC-230ENST00000557201 POTEJP0CG39 1038 aa14.24□□□□□ -0.13
HNRNPC-230ENST00000557201 TPTE2Q6XPS3 522 aa14.24□□□□□ -0.13
HNRNPC-230ENST00000557201 L3MBTL3Q96JM7 780 aaPredicted RBP14.24□□□□□ -0.13
HNRNPC-230ENST00000557201 SNED1Q8TER0 1413 aa14.24□□□□□ -0.13
HNRNPC-230ENST00000557201 LAMB4A4D0S4 1761 aa14.23□□□□□ -0.13
HNRNPC-230ENST00000557201 CCDC93Q567U6 631 aa14.23□□□□□ -0.13
HNRNPC-230ENST00000557201 KDM3BQ7LBC6 1761 aa14.23□□□□□ -0.13
HNRNPC-230ENST00000557201 FKBP4Q02790 459 aaKnown RBP eCLIP14.22□□□□□ -0.13
HNRNPC-230ENST00000557201 CHADLQ6NUI6 762 aa14.22□□□□□ -0.13
HNRNPC-230ENST00000557201 OLFM4Q6UX06 510 aa14.22□□□□□ -0.13
HNRNPC-230ENST00000557201 ERVV-1B6SEH8 477 aa14.22□□□□□ -0.13
HNRNPC-230ENST00000557201 EIF4A1P60842 406 aaKnown RBP14.22□□□□□ -0.13
HNRNPC-230ENST00000557201 CRY2Q49AN0 593 aa14.22□□□□□ -0.13
HNRNPC-230ENST00000557201 DLG5Q8TDM6 1919 aa14.21□□□□□ -0.13
HNRNPC-230ENST00000557201 PNISRQ8TF01 805 aaKnown RBP14.21□□□□□ -0.14
HNRNPC-230ENST00000557201 TAF1DQ9H5J8 278 aaPredicted RBP14.21□□□□□ -0.14
HNRNPC-230ENST00000557201 ZNF277Q9NRM2 450 aaPredicted RBP14.21□□□□□ -0.14
HNRNPC-230ENST00000557201 CREBZFQ9NS37 354 aa14.21□□□□□ -0.14
HNRNPC-230ENST00000557201 PASKQ96RG2 1323 aa14.21□□□□□ -0.14
HNRNPC-230ENST00000557201 ZNF541Q9H0D2 1346 aa14.21□□□□□ -0.14
HNRNPC-230ENST00000557201 ABCC12Q96J65 1359 aa14.2□□□□□ -0.14
HNRNPC-230ENST00000557201 SCN4AP35499 1836 aa14.2□□□□□ -0.14
HNRNPC-230ENST00000557201 FAM177BA6PVY3 158 aa14.2□□□□□ -0.14
HNRNPC-230ENST00000557201 HSPA1AP0DMV8 641 aaKnown RBP14.2□□□□□ -0.14
HNRNPC-230ENST00000557201 HSPA1BP0DMV9 641 aaKnown RBP14.2□□□□□ -0.14
HNRNPC-230ENST00000557201 DDX10Q13206 875 aaKnown RBP14.2□□□□□ -0.14
HNRNPC-230ENST00000557201 NFE2L2Q16236 605 aa14.2□□□□□ -0.14
HNRNPC-230ENST00000557201 TTLL7Q6ZT98 887 aa14.2□□□□□ -0.14
HNRNPC-230ENST00000557201 RTKN2Q8IZC4 609 aa14.2□□□□□ -0.14
HNRNPC-230ENST00000557201 MAP3K15Q6ZN16 1313 aa14.2□□□□□ -0.14
HNRNPC-230ENST00000557201 RIC1Q4ADV7 1423 aa14.2□□□□□ -0.14
HNRNPC-230ENST00000557201 IQCA1LA6NCM1 817 aa14.19□□□□□ -0.14
HNRNPC-230ENST00000557201 FZD9O00144 591 aa14.19□□□□□ -0.14
HNRNPC-230ENST00000557201 ALDH1B1P30837 517 aa14.19□□□□□ -0.14
HNRNPC-230ENST00000557201 LDHDQ86WU2 507 aa14.19□□□□□ -0.14
HNRNPC-230ENST00000557201 THUMPD2Q9BTF0 503 aaKnown RBP14.19□□□□□ -0.14
HNRNPC-230ENST00000557201 ADAMTSL1Q8N6G6 1762 aa14.18□□□□□ -0.14
HNRNPC-230ENST00000557201 IBTKQ9P2D0 1353 aaPredicted RBP14.18□□□□□ -0.14
HNRNPC-230ENST00000557201 UBN2Q6ZU65 1347 aa14.18□□□□□ -0.14
HNRNPC-230ENST00000557201 ITGBL1O95965 494 aaPredicted RBP14.18□□□□□ -0.14
HNRNPC-230ENST00000557201 HOXA10P31260 410 aaPredicted RBP14.18□□□□□ -0.14
HNRNPC-230ENST00000557201 LRP10Q7Z4F1 713 aa14.18□□□□□ -0.14
HNRNPC-230ENST00000557201 NUTM1Q86Y26 1132 aa14.18□□□□□ -0.14
HNRNPC-230ENST00000557201 SYNE4Q8N205 404 aa14.18□□□□□ -0.14
HNRNPC-230ENST00000557201 NYXQ9GZU5 481 aa14.18□□□□□ -0.14
HNRNPC-230ENST00000557201 NUP98P52948 1817 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms