RNA–Protein interactions for RNA: ENST00000557060.1

SYNE2-225, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 3,203 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-225ENST00000557060 NEURL1BA8MQ27 555 aa7.26□□□□□ -1.25
SYNE2-225ENST00000557060 GPTP24298 496 aa7.26□□□□□ -1.25
SYNE2-225ENST00000557060 CWC27Q6UX04 472 aaKnown RBP7.26□□□□□ -1.25
SYNE2-225ENST00000557060 CLASRPQ8N2M8 674 aaKnown RBP7.26□□□□□ -1.25
SYNE2-225ENST00000557060 LARP6Q9BRS8 491 aaKnown RBP7.26□□□□□ -1.25
SYNE2-225ENST00000557060 CARD10Q9BWT7 1032 aa7.26□□□□□ -1.25
SYNE2-225ENST00000557060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.26□□□□□ -1.25
SYNE2-225ENST00000557060 IBTKQ9P2D0 1353 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-225ENST00000557060 COL5A2P05997 1499 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-225ENST00000557060 KCNQ4P56696 695 aa7.26□□□□□ -1.25
SYNE2-225ENST00000557060 G3BP1Q13283 466 aaKnown RBP eCLIP7.26□□□□□ -1.25
SYNE2-225ENST00000557060 GCKRQ14397 625 aa7.26□□□□□ -1.25
SYNE2-225ENST00000557060 FOXD4L5Q5VV16 416 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-225ENST00000557060 DNAJC10Q8IXB1 793 aa7.26□□□□□ -1.25
SYNE2-225ENST00000557060 FOXD4L4Q8WXT5 416 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-225ENST00000557060 KIF1BPQ96EK5 621 aa7.26□□□□□ -1.25
SYNE2-225ENST00000557060 KAZALD1Q96I82 304 aa7.26□□□□□ -1.25
SYNE2-225ENST00000557060 GZF1Q9H116 711 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-225ENST00000557060 NCAPD2Q15021 1401 aa7.26□□□□□ -1.25
SYNE2-225ENST00000557060 CPDO75976 1380 aa7.25□□□□□ -1.25
SYNE2-225ENST00000557060 FAM182BQ5T319 152 aa7.25□□□□□ -1.25
SYNE2-225ENST00000557060 PIGBQ92521 554 aa7.25□□□□□ -1.25
SYNE2-225ENST00000557060 UPF3BQ9BZI7 483 aaKnown RBP7.25□□□□□ -1.25
SYNE2-225ENST00000557060 IL25Q9H293 177 aa7.25□□□□□ -1.25
SYNE2-225ENST00000557060 TLR7Q9NYK1 1049 aaKnown RBP7.25□□□□□ -1.25
SYNE2-225ENST00000557060 LRRC37A3O60309 1634 aa7.25□□□□□ -1.25
SYNE2-225ENST00000557060 PRIM1P49642 420 aaKnown RBP7.25□□□□□ -1.25
SYNE2-225ENST00000557060 EDC3Q96F86 508 aaKnown RBP7.25□□□□□ -1.25
SYNE2-225ENST00000557060 KIF2CQ99661 725 aa7.25□□□□□ -1.25
SYNE2-225ENST00000557060 BOLA2Q9H3K6 86 aa7.25□□□□□ -1.25
SYNE2-225ENST00000557060 FAM208AQ9UK61 1670 aaKnown RBP7.25□□□□□ -1.25
SYNE2-225ENST00000557060 NCOA3Q9Y6Q9 1424 aa7.25□□□□□ -1.25
SYNE2-225ENST00000557060 EXOC5O00471 708 aa7.25□□□□□ -1.25
SYNE2-225ENST00000557060 ERC2O15083 957 aa7.25□□□□□ -1.25
SYNE2-225ENST00000557060 TPRNQ4KMQ1 711 aa7.25□□□□□ -1.25
SYNE2-225ENST00000557060 METTL22Q9BUU2 404 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-225ENST00000557060 REC8O95072 547 aa7.24□□□□□ -1.25
SYNE2-225ENST00000557060 RBM25P49756 843 aaKnown RBP7.24□□□□□ -1.25
SYNE2-225ENST00000557060 LMBR1LQ6UX01 489 aa7.24□□□□□ -1.25
SYNE2-225ENST00000557060 SYNE4Q8N205 404 aa7.24□□□□□ -1.25
SYNE2-225ENST00000557060 C8orf37Q96NL8 207 aa7.24□□□□□ -1.25
SYNE2-225ENST00000557060 USP26Q9BXU7 913 aa7.24□□□□□ -1.25
SYNE2-225ENST00000557060 XIRP1Q702N8 1843 aaKnown RBP7.24□□□□□ -1.25
SYNE2-225ENST00000557060 ALDH1L1O75891 902 aa7.24□□□□□ -1.25
SYNE2-225ENST00000557060 POLA2Q14181 598 aa7.24□□□□□ -1.25
SYNE2-225ENST00000557060 ZNF594Q96JF6 807 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-225ENST00000557060 NEUROD6Q96NK8 337 aa7.24□□□□□ -1.25
SYNE2-225ENST00000557060 TBC1D2BQ9UPU7 963 aa7.24□□□□□ -1.25
SYNE2-225ENST00000557060 USP54Q70EL1 1684 aa7.24□□□□□ -1.25
SYNE2-225ENST00000557060 OVOS2A0A0G2JMS6 1433 aa7.24□□□□□ -1.25
SYNE2-225ENST00000557060 UBAP1LF5GYI3 381 aa7.23□□□□□ -1.25
SYNE2-225ENST00000557060 NEK4P51957 841 aa7.23□□□□□ -1.25
SYNE2-225ENST00000557060 FOXD4L6Q3SYB3 417 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-225ENST00000557060 FOXD4L3Q6VB84 417 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-225ENST00000557060 SMIM5Q71RC9 77 aa7.23□□□□□ -1.25
SYNE2-225ENST00000557060 EAF2Q96CJ1 260 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-225ENST00000557060 FAM89AQ96GI7 184 aa7.23□□□□□ -1.25
SYNE2-225ENST00000557060 PALD1Q9ULE6 856 aa7.23□□□□□ -1.25
SYNE2-225ENST00000557060 PHRF1Q9P1Y6 1649 aaKnown RBP7.23□□□□□ -1.25
SYNE2-225ENST00000557060 HEG1Q9ULI3 1381 aa7.23□□□□□ -1.25
SYNE2-225ENST00000557060 CHMLP26374 656 aa7.23□□□□□ -1.25
SYNE2-225ENST00000557060 SASH1O94885 1247 aa7.23□□□□□ -1.25
SYNE2-225ENST00000557060 CHGBP05060 677 aa7.23□□□□□ -1.25
SYNE2-225ENST00000557060 MKRN4PQ13434 485 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-225ENST00000557060 DNAJC2Q99543 621 aaKnown RBP7.23□□□□□ -1.25
SYNE2-225ENST00000557060 ESYT1Q9BSJ8 1104 aa7.23□□□□□ -1.25
SYNE2-225ENST00000557060 LMO7Q8WWI1 1683 aa7.23□□□□□ -1.25
SYNE2-225ENST00000557060 ERVV-2B6SEH9 535 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 RAB11FIP3O75154 756 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 NGLY1Q96IV0 654 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 DIAPH3Q9NSV4 1193 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 CPA1P15085 419 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 KCNJ4P48050 445 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 TFCP2Q12800 502 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 FAM98CQ17RN3 349 aaKnown RBP7.22□□□□□ -1.25
SYNE2-225ENST00000557060 HSP90AB4PQ58FF6 505 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 PLBD2Q8NHP8 589 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 PI4K2BQ8TCG2 481 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 ANTXR1Q9H6X2 564 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 ATG3Q9NT62 314 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 ZNF219Q9P2Y4 722 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-225ENST00000557060 K7ELQ4 463 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-225ENST00000557060 TIMM10P62072 90 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 DDB1Q16531 1140 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 KIAA1211Q6ZU35 1233 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 LRP10Q7Z4F1 713 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 CNTROBQ8N137 903 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 ECHDC1Q9NTX5 307 aa7.22□□□□□ -1.25
SYNE2-225ENST00000557060 KCNQ2O43526 872 aa7.21□□□□□ -1.26
SYNE2-225ENST00000557060 SLFNL1Q499Z3 407 aa7.21□□□□□ -1.26
SYNE2-225ENST00000557060 CHAMP1Q96JM3 812 aa7.21□□□□□ -1.26
SYNE2-225ENST00000557060 FSD1Q9BTV5 496 aa7.21□□□□□ -1.26
SYNE2-225ENST00000557060 OSBPL3Q9H4L5 887 aa7.21□□□□□ -1.26
SYNE2-225ENST00000557060 CWC25Q9NXE8 425 aaPredicted RBP7.21□□□□□ -1.26
SYNE2-225ENST00000557060 ZBTB1Q9Y2K1 713 aa7.21□□□□□ -1.26
SYNE2-225ENST00000557060 KDM3BQ7LBC6 1761 aa7.21□□□□□ -1.26
SYNE2-225ENST00000557060 COL18A1P39060 1754 aa7.21□□□□□ -1.26
SYNE2-225ENST00000557060 HLFQ16534 295 aa7.21□□□□□ -1.26
SYNE2-225ENST00000557060 TAF7LQ5H9L4 462 aa7.21□□□□□ -1.26
SYNE2-225ENST00000557060 ZGPATQ8N5A5 531 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms