RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 KIF7Q2M1P5 1343 aa13.37□□□□□ -0.27
HNRNPC-228ENST00000557033 FAM161AQ3B820 660 aa13.36□□□□□ -0.27
HNRNPC-228ENST00000557033 NLRP7Q8WX94 980 aa13.36□□□□□ -0.27
HNRNPC-228ENST00000557033 PPP1R1BQ9UD71 204 aaPredicted RBP13.36□□□□□ -0.27
HNRNPC-228ENST00000557033 CASZ1Q86V15 1759 aa13.35□□□□□ -0.27
HNRNPC-228ENST00000557033 CYP27B1O15528 508 aa13.35□□□□□ -0.27
HNRNPC-228ENST00000557033 EIF4A2Q14240 407 aaKnown RBP13.35□□□□□ -0.27
HNRNPC-228ENST00000557033 DIXDC1Q155Q3 683 aa13.35□□□□□ -0.27
HNRNPC-228ENST00000557033 TSR1Q2NL82 804 aaKnown RBP13.35□□□□□ -0.27
HNRNPC-228ENST00000557033 PDGFDQ9GZP0 370 aaPredicted RBP13.35□□□□□ -0.27
HNRNPC-228ENST00000557033 MTMR7Q9Y216 660 aa13.35□□□□□ -0.27
HNRNPC-228ENST00000557033 DOT1LQ8TEK3 1739 aa13.35□□□□□ -0.27
HNRNPC-228ENST00000557033 PLEKHG2Q9H7P9 1386 aa13.34□□□□□ -0.27
HNRNPC-228ENST00000557033 PXYLP1Q8TE99 480 aa13.34□□□□□ -0.27
HNRNPC-228ENST00000557033 MTFR1LQ9H019 292 aa13.34□□□□□ -0.27
HNRNPC-228ENST00000557033 PAPPAQ13219 1627 aa13.33□□□□□ -0.28
HNRNPC-228ENST00000557033 ZBTB7AO95365 584 aa13.33□□□□□ -0.28
HNRNPC-228ENST00000557033 SLAIN1Q8ND83 568 aa13.33□□□□□ -0.28
HNRNPC-228ENST00000557033 GDPD2Q9HCC8 539 aa13.33□□□□□ -0.28
HNRNPC-228ENST00000557033 PCDHGA10Q9Y5H3 936 aa13.33□□□□□ -0.28
HNRNPC-228ENST00000557033 LY75O60449 1722 aa13.33□□□□□ -0.28
HNRNPC-228ENST00000557033 PKD1L3Q7Z443 1732 aa13.33□□□□□ -0.28
HNRNPC-228ENST00000557033 PER1O15534 1290 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-228ENST00000557033 MFAP1P55081 439 aaKnown RBP13.32□□□□□ -0.28
HNRNPC-228ENST00000557033 PDE4CQ08493 712 aa13.32□□□□□ -0.28
HNRNPC-228ENST00000557033 ZNF827Q17R98 1081 aa13.32□□□□□ -0.28
HNRNPC-228ENST00000557033 MPRIPQ6WCQ1 1025 aa13.32□□□□□ -0.28
HNRNPC-228ENST00000557033 IFNL2Q8IZJ0 200 aa13.32□□□□□ -0.28
HNRNPC-228ENST00000557033 SLC16A10Q8TF71 515 aa13.32□□□□□ -0.28
HNRNPC-228ENST00000557033 CCNL1Q9UK58 526 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-228ENST00000557033 IGSF1Q8N6C5 1336 aa13.32□□□□□ -0.28
HNRNPC-228ENST00000557033 MTMR14Q8NCE2 650 aa13.31□□□□□ -0.28
HNRNPC-228ENST00000557033 SMARCC1Q92922 1105 aaPredicted RBP13.31□□□□□ -0.28
HNRNPC-228ENST00000557033 CALR3Q96L12 384 aaKnown RBP13.31□□□□□ -0.28
HNRNPC-228ENST00000557033 LIMD1Q9UGP4 676 aa13.31□□□□□ -0.28
HNRNPC-228ENST00000557033 ATMINO43313 823 aaPredicted RBP13.3□□□□□ -0.28
HNRNPC-228ENST00000557033 SLC34A2O95436 690 aa13.3□□□□□ -0.28
HNRNPC-228ENST00000557033 PHKG2P15735 406 aa13.3□□□□□ -0.28
HNRNPC-228ENST00000557033 WWC1Q8IX03 1113 aa13.3□□□□□ -0.28
HNRNPC-228ENST00000557033 TFCP2L1Q9NZI6 479 aa13.3□□□□□ -0.28
HNRNPC-228ENST00000557033 ADGRG1Q9Y653 693 aa13.3□□□□□ -0.28
HNRNPC-228ENST00000557033 PLCG2P16885 1265 aa13.29□□□□□ -0.28
HNRNPC-228ENST00000557033 KCNQ4P56696 695 aa13.29□□□□□ -0.28
HNRNPC-228ENST00000557033 AMOTQ4VCS5 1084 aa13.29□□□□□ -0.28
HNRNPC-228ENST00000557033 PLEKHO1Q53GL0 409 aaPredicted RBP13.29□□□□□ -0.28
HNRNPC-228ENST00000557033 TYW1BQ6NUM6 668 aa13.29□□□□□ -0.28
HNRNPC-228ENST00000557033 QSER1Q2KHR3 1735 aa13.29□□□□□ -0.28
HNRNPC-228ENST00000557033 ITGB4P16144 1822 aa13.28□□□□□ -0.28
HNRNPC-228ENST00000557033 HSP90AB1P08238 724 aaKnown RBP13.28□□□□□ -0.28
HNRNPC-228ENST00000557033 IL13P35225 146 aa13.28□□□□□ -0.28
HNRNPC-228ENST00000557033 RIC3Q7Z5B4 369 aa13.28□□□□□ -0.28
HNRNPC-228ENST00000557033 PIGBQ92521 554 aa13.28□□□□□ -0.28
HNRNPC-228ENST00000557033 TUSC1Q2TAM9 212 aa13.27□□□□□ -0.29
HNRNPC-228ENST00000557033 TMOD3Q9NYL9 352 aa13.27□□□□□ -0.29
HNRNPC-228ENST00000557033 PNPLA7Q6ZV29 1317 aa13.27□□□□□ -0.29
HNRNPC-228ENST00000557033 PALLDQ8WX93 1383 aa13.27□□□□□ -0.29
HNRNPC-228ENST00000557033 ERVV-2B6SEH9 535 aa13.26□□□□□ -0.29
HNRNPC-228ENST00000557033 MTHFSP49914 203 aa13.26□□□□□ -0.29
HNRNPC-228ENST00000557033 PADI6Q6TGC4 694 aa13.26□□□□□ -0.29
HNRNPC-228ENST00000557033 FLAD1Q8NFF5 587 aa13.26□□□□□ -0.29
HNRNPC-228ENST00000557033 DCAF5Q96JK2 942 aa13.26□□□□□ -0.29
HNRNPC-228ENST00000557033 NPC1L1Q9UHC9 1359 aa13.26□□□□□ -0.29
HNRNPC-228ENST00000557033 TOGARAM1Q9Y4F4 1720 aa13.25□□□□□ -0.29
HNRNPC-228ENST00000557033 ASTLQ6HA08 431 aaPredicted RBP13.25□□□□□ -0.29
HNRNPC-228ENST00000557033 SULT6B1Q6IMI4 303 aa13.25□□□□□ -0.29
HNRNPC-228ENST00000557033 KDRP35968 1356 aa13.24□□□□□ -0.29
HNRNPC-228ENST00000557033 POM121CA8CG34 1229 aa13.24□□□□□ -0.29
HNRNPC-228ENST00000557033 POLD1P28340 1107 aa13.24□□□□□ -0.29
HNRNPC-228ENST00000557033 CC2D1BQ5T0F9 858 aaKnown RBP13.24□□□□□ -0.29
HNRNPC-228ENST00000557033 TTC13Q8NBP0 860 aa13.24□□□□□ -0.29
HNRNPC-228ENST00000557033 GLMNQ92990 594 aa13.24□□□□□ -0.29
HNRNPC-228ENST00000557033 SYT17Q9BSW7 474 aa13.24□□□□□ -0.29
HNRNPC-228ENST00000557033 PRM3Q9NNZ6 103 aa13.24□□□□□ -0.29
HNRNPC-228ENST00000557033 LOC102724428A0A0B4J2F2 783 aa13.23□□□□□ -0.29
HNRNPC-228ENST00000557033 ABL2P42684 1182 aa13.23□□□□□ -0.29
HNRNPC-228ENST00000557033 SIK1P57059 783 aa13.23□□□□□ -0.29
HNRNPC-228ENST00000557033 C1orf141Q5JVX7 400 aa13.23□□□□□ -0.29
HNRNPC-228ENST00000557033 ZNF530Q6P9A1 599 aaPredicted RBP13.23□□□□□ -0.29
HNRNPC-228ENST00000557033 COL23A1Q86Y22 540 aaPredicted RBP13.23□□□□□ -0.29
HNRNPC-228ENST00000557033 SPIRE2Q8WWL2 714 aa13.23□□□□□ -0.29
HNRNPC-228ENST00000557033 FBXW7Q969H0 707 aa13.23□□□□□ -0.29
HNRNPC-228ENST00000557033 FHDC1Q9C0D6 1143 aaPredicted RBP13.23□□□□□ -0.29
HNRNPC-228ENST00000557033 ATG3Q9NT62 314 aa13.23□□□□□ -0.29
HNRNPC-228ENST00000557033 ASAP1Q9ULH1 1129 aa13.23□□□□□ -0.29
HNRNPC-228ENST00000557033 COL24A1Q17RW2 1714 aa13.22□□□□□ -0.29
HNRNPC-228ENST00000557033 C5P01031 1676 aa13.22□□□□□ -0.29
HNRNPC-228ENST00000557033 DIAPH1O60610 1272 aaKnown RBP13.22□□□□□ -0.29
HNRNPC-228ENST00000557033 CLCN6P51797 869 aa13.22□□□□□ -0.29
HNRNPC-228ENST00000557033 TAF1LQ8IZX4 1826 aa13.22□□□□□ -0.29
HNRNPC-228ENST00000557033 MAP3K5Q99683 1374 aa13.21□□□□□ -0.29
HNRNPC-228ENST00000557033 TUBGCP6Q96RT7 1819 aa13.21□□□□□ -0.29
HNRNPC-228ENST00000557033 PATL2C9JE40 543 aaKnown RBP13.21□□□□□ -0.29
HNRNPC-228ENST00000557033 SPTLC1O15269 473 aa13.21□□□□□ -0.29
HNRNPC-228ENST00000557033 FOXD4L5Q5VV16 416 aaPredicted RBP13.21□□□□□ -0.29
HNRNPC-228ENST00000557033 FOXD4L4Q8WXT5 416 aaPredicted RBP13.21□□□□□ -0.29
HNRNPC-228ENST00000557033 ATP6V1AP38606 617 aa13.2□□□□□ -0.3
HNRNPC-228ENST00000557033 CABP4P57796 275 aa13.2□□□□□ -0.3
HNRNPC-228ENST00000557033 AKAP4Q5JQC9 854 aa13.19□□□□□ -0.3
HNRNPC-228ENST00000557033 RBM27Q9P2N5 1060 aaKnown RBP13.19□□□□□ -0.3
HNRNPC-228ENST00000557033 TBC1D2BQ9UPU7 963 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms