RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 WEE1P30291 646 aa8.38□□□□□ -1.07
ATXN3-246ENST00000557030 SCG3Q8WXD2 468 aaKnown RBP8.38□□□□□ -1.07
ATXN3-246ENST00000557030 OXCT2Q9BYC2 517 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-246ENST00000557030 PHACTR1Q9C0D0 580 aa8.38□□□□□ -1.07
ATXN3-246ENST00000557030 ZMIZ1Q9ULJ6 1067 aa8.38□□□□□ -1.07
ATXN3-246ENST00000557030 HCN4Q9Y3Q4 1203 aa8.38□□□□□ -1.07
ATXN3-246ENST00000557030 ARID3CA6NKF2 412 aa8.37□□□□□ -1.07
ATXN3-246ENST00000557030 RFX1P22670 979 aa8.37□□□□□ -1.07
ATXN3-246ENST00000557030 FAM69CQ0P6D2 419 aa8.37□□□□□ -1.07
ATXN3-246ENST00000557030 LAMC2Q13753 1193 aa8.37□□□□□ -1.07
ATXN3-246ENST00000557030 BICDL1Q6ZP65 573 aa8.37□□□□□ -1.07
ATXN3-246ENST00000557030 STRN4Q9NRL3 753 aa8.37□□□□□ -1.07
ATXN3-246ENST00000557030 DCDC2BA2VCK2 349 aa8.36□□□□□ -1.07
ATXN3-246ENST00000557030 CDCA8Q53HL2 280 aa8.36□□□□□ -1.07
ATXN3-246ENST00000557030 LRRC69Q6ZNQ3 347 aa8.36□□□□□ -1.07
ATXN3-246ENST00000557030 ALDH16A1Q8IZ83 802 aa8.36□□□□□ -1.07
ATXN3-246ENST00000557030 ATG7O95352 703 aa8.35□□□□□ -1.07
ATXN3-246ENST00000557030 ARAFP10398 606 aa8.35□□□□□ -1.07
ATXN3-246ENST00000557030 BMP4P12644 408 aa8.35□□□□□ -1.07
ATXN3-246ENST00000557030 FAM200AQ8TCP9 573 aa8.35□□□□□ -1.07
ATXN3-246ENST00000557030 RHPN1Q8TCX5 695 aa8.35□□□□□ -1.07
ATXN3-246ENST00000557030 HINFPQ9BQA5 517 aa8.35□□□□□ -1.07
ATXN3-246ENST00000557030 AVENQ9NQS1 362 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-246ENST00000557030 KLF15Q9UIH9 416 aa8.35□□□□□ -1.07
ATXN3-246ENST00000557030 GDF2Q9UK05 429 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-246ENST00000557030 NOVA2Q9UNW9 492 aaKnown RBP8.35□□□□□ -1.07
ATXN3-246ENST00000557030 CHMP3Q9Y3E7 222 aa8.35□□□□□ -1.07
ATXN3-246ENST00000557030 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-246ENST00000557030 SHISA8B8ZZ34 492 aa8.34□□□□□ -1.07
ATXN3-246ENST00000557030 KHNYNO15037 678 aaKnown RBP8.34□□□□□ -1.07
ATXN3-246ENST00000557030 LGR5O75473 907 aa8.34□□□□□ -1.07
ATXN3-246ENST00000557030 MAP3K10Q02779 954 aa8.34□□□□□ -1.07
ATXN3-246ENST00000557030 SLCO4C1Q6ZQN7 724 aa8.34□□□□□ -1.07
ATXN3-246ENST00000557030 GOLGA6L1Q8N7Z2 621 aa8.34□□□□□ -1.07
ATXN3-246ENST00000557030 ZNF280CQ8ND82 737 aa8.34□□□□□ -1.07
ATXN3-246ENST00000557030 ENAMQ9NRM1 1142 aa8.34□□□□□ -1.07
ATXN3-246ENST00000557030 TIMELESSQ9UNS1 1208 aa8.34□□□□□ -1.07
ATXN3-246ENST00000557030 ACIN1Q9UKV3 1341 aaKnown RBP8.33□□□□□ -1.08
ATXN3-246ENST00000557030 HOXB4P17483 251 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-246ENST00000557030 CD33P20138 364 aa8.33□□□□□ -1.08
ATXN3-246ENST00000557030 KCNQ4P56696 695 aa8.33□□□□□ -1.08
ATXN3-246ENST00000557030 SWI5Q1ZZU3 235 aa8.33□□□□□ -1.08
ATXN3-246ENST00000557030 SUSD3Q96L08 255 aa8.33□□□□□ -1.08
ATXN3-246ENST00000557030 MDFIQ99750 246 aa8.33□□□□□ -1.08
ATXN3-246ENST00000557030 C1orf115Q9H7X2 142 aa8.33□□□□□ -1.08
ATXN3-246ENST00000557030 MARK1Q9P0L2 795 aa8.33□□□□□ -1.08
ATXN3-246ENST00000557030 SERPINA10Q9UK55 444 aa8.33□□□□□ -1.08
ATXN3-246ENST00000557030 GJA3Q9Y6H8 435 aa8.33□□□□□ -1.08
ATXN3-246ENST00000557030 FOXO3O43524 673 aa8.32□□□□□ -1.08
ATXN3-246ENST00000557030 HSH2DQ96JZ2 352 aa8.32□□□□□ -1.08
ATXN3-246ENST00000557030 ANKIB1Q9P2G1 1089 aa8.32□□□□□ -1.08
ATXN3-246ENST00000557030 GGA1Q9UJY5 639 aa8.32□□□□□ -1.08
ATXN3-246ENST00000557030 TYRO3Q06418 890 aa8.31□□□□□ -1.08
ATXN3-246ENST00000557030 GRIN2CQ14957 1233 aa8.31□□□□□ -1.08
ATXN3-246ENST00000557030 OCLNQ16625 522 aa8.31□□□□□ -1.08
ATXN3-246ENST00000557030 RTN1Q16799 776 aa8.31□□□□□ -1.08
ATXN3-246ENST00000557030 ZNF468Q5VIY5 522 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-246ENST00000557030 IER5Q5VY09 327 aa8.31□□□□□ -1.08
ATXN3-246ENST00000557030 GALNT6Q8NCL4 622 aa8.31□□□□□ -1.08
ATXN3-246ENST00000557030 STK32AQ8WU08 396 aa8.31□□□□□ -1.08
ATXN3-246ENST00000557030 CHMP7Q8WUX9 453 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-246ENST00000557030 EDARADDQ8WWZ3 215 aa8.31□□□□□ -1.08
ATXN3-246ENST00000557030 PBXIP1Q96AQ6 731 aa8.31□□□□□ -1.08
ATXN3-246ENST00000557030 DMGDHQ9UI17 866 aaKnown RBP8.31□□□□□ -1.08
ATXN3-246ENST00000557030 BCS1LQ9Y276 419 aa8.31□□□□□ -1.08
ATXN3-246ENST00000557030 EPXP11678 715 aa8.3□□□□□ -1.08
ATXN3-246ENST00000557030 SFSWAPQ12872 951 aaKnown RBP8.3□□□□□ -1.08
ATXN3-246ENST00000557030 FCHSD1Q86WN1 690 aa8.3□□□□□ -1.08
ATXN3-246ENST00000557030 MYO19Q96H55 970 aa8.3□□□□□ -1.08
ATXN3-246ENST00000557030 QTRT2Q9H974 415 aaKnown RBP8.3□□□□□ -1.08
ATXN3-246ENST00000557030 RNF225M0QZC1 329 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-246ENST00000557030 SCARF2Q96GP6 870 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-246ENST00000557030 DNMT3AQ9Y6K1 912 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-246ENST00000557030 MARSP56192 900 aaKnown RBP8.28□□□□□ -1.08
ATXN3-246ENST00000557030 RASSF7Q02833 373 aa8.28□□□□□ -1.08
ATXN3-246ENST00000557030 HIF1AQ16665 826 aa8.28□□□□□ -1.08
ATXN3-246ENST00000557030 TMEM164Q5U3C3 297 aa8.28□□□□□ -1.08
ATXN3-246ENST00000557030 BTLAQ7Z6A9 289 aa8.28□□□□□ -1.08
ATXN3-246ENST00000557030 CCDC97Q96F63 343 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-246ENST00000557030 SLC30A3Q99726 388 aa8.28□□□□□ -1.08
ATXN3-246ENST00000557030 NEUROD4Q9HD90 331 aa8.28□□□□□ -1.08
ATXN3-246ENST00000557030 BRD7Q9NPI1 651 aa8.28□□□□□ -1.08
ATXN3-246ENST00000557030 CNTNAP5Q8WYK1 1306 aa8.28□□□□□ -1.08
ATXN3-246ENST00000557030 NEURL1BA8MQ27 555 aa8.27□□□□□ -1.09
ATXN3-246ENST00000557030 TGFBR3LH3BV60 316 aa8.27□□□□□ -1.09
ATXN3-246ENST00000557030 ADH6P28332 368 aa8.27□□□□□ -1.09
ATXN3-246ENST00000557030 GRNP28799 593 aaKnown RBP8.27□□□□□ -1.09
ATXN3-246ENST00000557030 SNRPNP63162 240 aaKnown RBP8.27□□□□□ -1.09
ATXN3-246ENST00000557030 FKBP5Q13451 457 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-246ENST00000557030 ERICH6Q7L0X2 663 aa8.27□□□□□ -1.09
ATXN3-246ENST00000557030 NEDD1Q8NHV4 660 aa8.27□□□□□ -1.09
ATXN3-246ENST00000557030 SLAIN2Q9P270 581 aa8.27□□□□□ -1.09
ATXN3-246ENST00000557030 SUPT5HO00267 1087 aaKnown RBP8.26□□□□□ -1.09
ATXN3-246ENST00000557030 KANK3Q6NY19 840 aa8.26□□□□□ -1.09
ATXN3-246ENST00000557030 CCDC82Q8N4S0 544 aa8.26□□□□□ -1.09
ATXN3-246ENST00000557030 NGLY1Q96IV0 654 aa8.26□□□□□ -1.09
ATXN3-246ENST00000557030 BTBD6Q96KE9 485 aa8.26□□□□□ -1.09
ATXN3-246ENST00000557030 CEP63Q96MT8 703 aa8.26□□□□□ -1.09
ATXN3-246ENST00000557030 LRFN2Q9ULH4 789 aa8.26□□□□□ -1.09
ATXN3-246ENST00000557030 SIN3BO75182 1162 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms